Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PGBD4_3

Gene Name Gene ID Reads Annotation
PGBD4_3 PGBD4_3 861










Genes with expression patterns similar to PGBD4_3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PGBD4_3 PGBD4_3 861 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. yy1b ENSDARG00000027978 2669 1.935 - - 0.980 - - - - - 0.955 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
3. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.806 - - 0.990 - - 0.816 - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
4. xylt1 ENSDARG00000061248 2357 1.765 - - 0.971 - - - - - 0.794 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
5. flot2a ENSDARG00000004830 5276 1.761 - - 0.977 - - - - - 0.784 flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
6. si:ch211-125e6.8 ENSDARG00000094518 538 1.744 - - 0.982 - - - 0.762 - - si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
7. U6 U6 931 1.729 - - - - - 0.751 - - 0.978
8. gstm gstm 4064 1.728 - - 0.875 - - - - - 0.853
9. wdhd1 ENSDARG00000015998 775 1.726 - - 0.993 - - - 0.733 - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
10. setdb1a ENSDARG00000041243 1952 1.725 0.735 - 0.990 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
11. usp8 ENSDARG00000063719 643 1.714 - - 0.990 - - 0.724 - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
12. sec24d ENSDARG00000045946 2395 1.709 - - 0.973 - - 0.736 - - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
13. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.708 - - - - - 0.734 - - 0.974 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
14. hnrpkl ENSDARG00000007034 4660 1.687 - 0.742 0.945 - - - - - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
15. ube2v1 ENSDARG00000041875 5739 1.678 - - 0.932 - - - - - 0.746 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
16. tdg tdg 3269 1.664 - - 0.952 - - - - - 0.712
17. eif3g ENSDARG00000016889 10367 1.663 - - 0.790 - - - - - 0.873 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
18. arhgap5 ENSDARG00000061294 2228 1.655 - - 0.715 - - - - - 0.940 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
19. impdh1b ENSDARG00000029524 7472 1.637 - - 0.906 - - - - - 0.731 IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
20. taldo1 ENSDARG00000103369 3804 1.636 - - 0.836 - - - - - 0.800 transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
21. gkap1 ENSDARG00000068123 2645 1.605 - - - - - - 0.709 - 0.896 G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
22. pabpn1 ENSDARG00000045373 4876 1.584 - - 0.873 - - - 0.711 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
23. anxa2a ENSDARG00000003216 10684 1.582 - - 0.846 - - - - - 0.736 annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
24. actr1 ENSDARG00000011611 3879 1.577 - 0.706 - - - - - - 0.871 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
25. ENSDARG00000058760 ENSDARG00000058760 1076 1.532 - 0.730 - - - 0.802 - - -
26. CWC15 ENSDARG00000013382 8969 1.531 0.727 - - - - - - - 0.804 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
27. mapkapk2a ENSDARG00000002552, ENSDARG00000116786 4233 1.53 - - 0.781 - - - 0.749 - - mitogen-activated protein kinase-activated protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5532]
28. acvr1l ENSDARG00000014986 1239 1.517 - 0.767 - - - - 0.750 - - activin A receptor, type 1 like [Source:ZFIN;Acc:ZDB-GENE-990415-9]
29. slc25a1b ENSDARG00000076381 6213 1.499 - - - - - 0.721 - - 0.778 slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
30. C11H12orf10 C11H12orf10 1305 1.45 - 0.702 - - - - - 0.748 -
31. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.44 - 0.733 - - - - - - 0.707 sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
32. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.439 - - - - - - 0.700 - 0.739 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
33. scocb ENSDARG00000002217 1844 1.436 0.717 - - - - - - 0.719 - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
34. si:dkey-176f19.6 si:dkey-176f19.6 373 0.995 - - 0.995 - - - - - -
35. fut8 fut8 652 0.995 - - 0.995 - - - - - -
36. rhogc ENSDARG00000028401 2671 0.995 - - 0.995 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
37. smad4 smad4 2519 0.995 - - 0.995 - - - - - -
38. lrp12 ENSDARG00000098845 999 0.994 - - 0.994 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
39. vipas39 ENSDARG00000103690 280 0.994 - - 0.994 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
40. SNX19 SNX19 350 0.994 - - 0.994 - - - - - -
41. lgi1a ENSDARG00000020493 1218 0.994 - - 0.994 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
42. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.994 - - 0.994 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
43. pou6f1 ENSDARG00000011570 1501 0.994 - - 0.994 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
44. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.994 - - 0.994 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
45. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.994 - - 0.994 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
46. zgc:113227 ENSDARG00000058874 266 0.994 - - 0.994 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
47. nrg1 ENSDARG00000104314 1081 0.994 - - 0.994 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
48. zgc:171673 ENSDARG00000102473 256 0.994 - - 0.994 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
49. clybl ENSDARG00000029729 690 0.993 - - 0.993 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
50. sema3fa ENSDARG00000011163 759 0.993 - - 0.993 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
51. inip ENSDARG00000028523 1925 0.993 - - 0.993 - - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
52. CU467832.1 CU467832.1 635 0.993 - - 0.993 - - - - - -
53. RAB39B RAB39B 482 0.993 - - 0.993 - - - - - -
54. pkib ENSDARG00000053110 527 0.993 - - 0.993 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
55. f2rl1.2 ENSDARG00000077540 822 0.993 - - 0.993 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
56. pld1b ENSDARG00000057125 325 0.993 - - 0.993 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
57. gata1b ENSDARG00000059130 151 0.993 - - 0.993 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
58. U1_25 U1_25 283 0.993 - - 0.993 - - - - - -
59. mfsd4a mfsd4a 179 0.993 - - 0.993 - - - - - -
60. pycr1 pycr1 1258 0.992 - - 0.992 - - - - - -
61. PATZ1 ENSDARG00000076584 1116 0.992 - - 0.992 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
62. gbas gbas 735 0.992 - - 0.992 - - - - - -
63. DNAJC16 ENSDARG00000059699 507 0.992 - - 0.992 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
64. PPP1R16B ENSDARG00000079860 390 0.992 - - 0.992 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
65. znf410 ENSDARG00000008218 1807 0.992 - - 0.992 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
66. pank1b ENSDARG00000010098 3202 0.992 - - 0.992 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
67. CLIP4 ENSDARG00000096961 363 0.992 - - 0.992 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
68. phf12a ENSDARG00000074303 1025 0.992 - - 0.992 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
69. gga3 ENSDARG00000103667 675 0.991 - - 0.991 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
70. pnn ENSDARG00000015851 1269 0.991 - - 0.991 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
71. qki2 ENSDARG00000010018 2230 0.991 - - 0.991 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
72. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.991 - - 0.991 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
73. klhl15 ENSDARG00000001930 793 0.991 - - 0.991 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
74. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.991 - - 0.991 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
75. fignl1 ENSDARG00000016427 636 0.991 - - 0.991 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
76. dyrk1ab ENSDARG00000023814 1769 0.991 - - 0.991 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
77. phc2b_1 ENSDARG00000013224 1316 0.991 - - 0.991 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
78. lipt1 ENSDARG00000025233 385 0.991 - - 0.991 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
79. mrpl22 ENSDARG00000109961 1374 0.991 - - 0.991 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
80. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.991 - - 0.991 - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
81. cln6a ENSDARG00000077584 1090 0.991 - - 0.991 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
82. tmem248 ENSDARG00000018825 1560 0.99 - - 0.990 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
83. gins4 ENSDARG00000016044 671 0.99 - - 0.990 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
84. MED8 ENSDARG00000114425 459 0.99 - - 0.990 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
85. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.99 - - 0.990 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
86. smg5 ENSDARG00000041481 1286 0.989 - - 0.989 - - - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
87. NAIF1_1 NAIF1_1 1336 0.989 - - 0.989 - - - - - -
88. hemk1 ENSDARG00000078894 397 0.989 - - 0.989 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
89. actr10 ENSDARG00000038432 1598 0.989 - - 0.989 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
90. selt1b 1396 0.989 - - 0.989 - - - - - - selenoprotein T, 1b
91. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.988 - - 0.988 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
92. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.987 - - 0.987 - - - - - - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
93. wu:fc26g07 wu:fc26g07 1165 0.987 - - 0.987 - - - - - -
94. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.987 - - 0.987 - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
95. mettl3 ENSDARG00000012827 728 0.987 - - 0.987 - - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
96. arid1b ENSDARG00000092503 1376 0.987 - - 0.987 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
97. pdzrn3b ENSDARG00000073869 1566 0.987 - - 0.987 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
98. coil ENSDARG00000040070 863 0.987 - - - - - - - - 0.987 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
99. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.987 - - 0.987 - - - - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
100. slain2 ENSDARG00000032114 798 0.986 - - 0.986 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]

There are 722 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA