Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PGBD4

Gene Name Gene ID Reads Annotation
PGBD4 ENSDARG00000079328 20 piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]










Genes with expression patterns similar to PGBD4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PGBD4 ENSDARG00000079328 20 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
2. si:ch73-103b9.2 ENSDARG00000092489 89 2.437 - 0.915 0.809 - - - 0.713 - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
3. si:dkey-200l5.4 ENSDARG00000095294 13 2 1.000 - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
4. jakmip2 ENSDARG00000053547 32 2 1.000 - - - - 1.000 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
5. BEGAIN BEGAIN 39 2 1.000 - - - - 1.000 - - -
6. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
7. BTBD17 BTBD17 53 2 - 1.000 - - - 1.000 - - -
8. WNK3 WNK3 36 2 - 1.000 - - - 1.000 - - -
9. si:dkey-56m15.4 si:dkey-56m15.4 39 2 1.000 1.000 - - - - - - -
10. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
11. BX548021.2 BX548021.2 4 2 1.000 1.000 - - - - - - -
12. si:ch211-10j20.7 si:ch211-10j20.7 8 2 1.000 1.000 - - - - - - -
13. si:dkey-4j21.1 17 2 1.000 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
14. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 1.000 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
15. CT955987.1 CT955987.1 9 1.939 - 1.000 - - 0.939 - - - -
16. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1.939 1.000 - - - 0.939 - - - - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
17. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
18. CABZ01073736.1 ENSDARG00000099438 81 1.895 1.000 - - - - - 0.895 - -
19. si:ch73-57f22.2 ENSDARG00000087453 28 1.893 1.000 - - - - 0.893 - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
20. cnn1b ENSDARG00000102398 40 1.883 1.000 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
21. CU929230.1 ENSDARG00000030665 48 1.883 - 0.883 - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
22. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
23. dync1i2b ENSDARG00000103195 46 1.878 1.000 - - - 0.878 - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
24. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
25. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
26. abcg1 ENSDARG00000063475 97 1.857 - - 0.857 - - 1.000 - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
27. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
28. hyal3 ENSDARG00000036818 23 1.854 - - 0.854 - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
29. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
30. SACS ENSDARG00000091042 15 1.821 - 1.000 0.821 - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
31. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
32. SNORA31 SNORA31 23 1.809 1.000 - - - - - 0.809 - -
33. mlphb ENSDARG00000062481 14 1.809 1.000 - - - - - 0.809 - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
34. si:dkey-222f2.3 si:dkey-222f2.3 8 1.799 - 1.000 - - - 0.799 - - -
35. pag1 ENSDARG00000055875 21 1.79 - 1.000 0.790 - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
36. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1.785 - 1.000 0.785 - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
37. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
38. nosip ENSDARG00000037958, ENSDARG00000112335 59 1.77 1.000 - - - - 0.770 - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
39. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
40. BX470131.1 BX470131.1 86 1.76 1.000 - 0.760 - - - - - -
41. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
42. cthrc1b ENSDARG00000001971 44 1.75 - 1.000 - - - 0.750 - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
43. GAS2_1 GAS2_1 16 1.746 - 1.000 - - - 0.746 - - -
44. CSMD1 CSMD1 15 1.731 1.000 0.731 - - - - - - -
45. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
46. MSRA ENSDARG00000029587 30 1.713 - 1.000 0.713 - - - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
47. GPR180 73 1.713 - 0.713 - - - 1.000 - - - G protein-coupled receptor 180, transcript variant X2
48. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
49. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
50. lepa ENSDARG00000091085 11 1.702 - 1.000 - - - 0.702 - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
51. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
52. zgc:174224_2 ENSDARG00000093875 22 1.672 - 0.731 - 0.941 - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
53. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
54. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
55. cftr ENSDARG00000041107, ENSDARG00000110312 56 1.646 - 0.896 0.750 - - - - - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
56. CABZ01006980.1 CABZ01006980.1 5 1.632 - - - - 0.930 - 0.702 - -
57. si:zfos-979f1.2 ENSDARG00000011652 24 1.625 - - - - 0.748 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
58. he1b 11900 1.622 - - - - - 0.907 - 0.715 - hatching enzyme 1b
59. slc1a1 ENSDARG00000020212 104 1.62 0.896 - - - 0.724 - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
60. si:rp71-36n21.1 93 1.616 0.802 - - - - 0.814 - - - si:rp71-36n21.1
61. SBK3_1 SBK3_1 21 1.593 - - 0.839 - - 0.754 - - -
62. epsti1 ENSDARG00000094578 33 1.579 - - - - 0.770 - 0.809 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
63. C20H8orf82 C20H8orf82 91 1.579 0.854 - - - - - 0.725 - -
64. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1.556 0.771 - - - - 0.785 - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
65. TUSC5_1 TUSC5_1 320 1.554 0.767 - - - - - 0.787 - -
66. si:ch211-225p5.3 si:ch211-225p5.3 10 1.539 - - 0.837 - - 0.702 - - -
67. BSCL2 ENSDARG00000037008 689 1.53 - 0.763 - - - - 0.767 - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
68. diaph2 ENSDARG00000076060 26 1.513 - 0.704 - - - - 0.809 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
69. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
70. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
71. neurod neurod 1189 1.492 - - - 0.720 - 0.772 - - -
72. ascl1a ENSDARG00000038386 1290 1.469 - 0.700 - - - 0.769 - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
73. gig2o ENSDARG00000086903 30 1.464 - 0.705 - - - 0.759 - - - grass carp reovirus (GCRV)-induced gene 2o [Source:ZFIN;Acc:ZDB-GENE-130517-8]
74. C19H9orf91 C19H9orf91 249 1.456 - 0.744 - - - - 0.712 - -
75. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
76. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1.426 - 0.713 - - - - 0.713 - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
77. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
78. CR376785.2 CR376785.2 175 1 - 1.000 - - - - - - -
79. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
80. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
81. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
82. arl8 ENSDARG00000094709 6 1 - 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
83. tcf23 ENSDARG00000087381 6 1 - 1.000 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
84. sgms2 57 1 - 1.000 - - - - - - - sphingomyelin synthase 2, transcript variant X1
85. spred3 ENSDARG00000040358 134 1 - 1.000 - - - - - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
86. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
87. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
88. l3mbtl3 ENSDARG00000025983 12 1 - 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
89. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
90. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
91. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
92. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
93. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
94. si:dkey-247i3.1 ENSDARG00000076252 11 1 - 1.000 - - - - - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
95. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
96. si:dkey-217m5.3 si:dkey-217m5.3 22 1 - - - - - 1.000 - - -
97. zgc:114037_2 11 1 - 1.000 - - - - - - - zgc:114037
98. tmeff2b ENSDARG00000058699 82 1 - 1.000 - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
99. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
100. si:ch211-57f7.7 ENSDARG00000093131 8 1 - 1.000 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]

There are 1297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA