Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PGAM5

Gene Name Gene ID Reads Annotation
PGAM5 ENSGALG00000002137 7700 PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]











Genes with expression patterns similar to PGAM5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PGAM5 ENSGALG00000002137 7700 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
2. ETF1 ENSGALG00000002262 14560 1.834 - - - - 0.980 - - 0.854 - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
3. SPG21 ENSGALG00000007262 8050 1.822 - - - - 0.974 - - 0.848 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
4. NDUFB3 ENSGALG00000008239 15511 1.818 - - - - - - 0.872 0.946 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
5. FAM98A ENSGALG00000010428 9585 1.807 - - - - 0.971 - 0.836 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
6. C4orf27 C4orf27 16724 1.8 - - - - 0.988 - 0.812 - - -
7. OAF ENSGALG00000006715 12518 1.783 - - - - 0.975 - - 0.808 - - out at first homolog [Source:NCBI gene;Acc:395161]
8. CHMP3 ENSGALG00000015805 11581 1.753 - - - - - - 0.811 0.942 - - charged multivesicular body protein 3
9. SMDT1 ENSGALG00000011897 9360 1.729 - - - - - - 0.808 0.921 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
10. HMGB3 ENSGALG00000009071 12011 1.729 - - - - 0.986 - 0.743 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
11. FXR1 ENSGALG00000008864 10250 1.714 - - - - - - 0.805 0.909 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
12. UQCRC2 ENSGALG00000002490 23477 1.709 - - - - 0.980 - 0.729 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
13. INCENP ENSGALG00000007537 16617 1.704 - - - - 0.974 - 0.730 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
14. CCDC59 ENSGALG00000028648 9272 1.704 - - - - 0.987 - 0.717 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
15. RAE1 ENSGALG00000007653 8930 1.698 - - - - 0.987 - 0.711 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
16. SEC61A2 ENSGALG00000036300 4235 1.688 - - - - 0.987 - 0.701 - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
17. CHMP6 ENSGALG00000026428 18026 1.668 - - - - - - 0.759 0.909 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
18. PPCS ENSGALG00000004882 5759 1.664 - - - - - - 0.768 0.896 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
19. DLD ENSGALG00000007931 11011 1.654 - - - - - - 0.837 0.817 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
20. MRPL20 ENSGALG00000001542 28764 1.65 - - - - - - 0.779 0.871 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
21. PAN3 ENSGALG00000017092 5387 1.648 - - - - - - 0.787 0.861 - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
22. ERGIC2 ENSGALG00000007183 12870 1.646 - - - - - - 0.758 0.888 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
23. SNAI2 ENSGALG00000030902 8201 1.64 - - - - - - 0.735 0.905 - - snail family transcriptional repressor 2
24. HNRNPD ENSGALG00000011184 10686 1.64 - - - - - - 0.759 0.881 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
25. RUVBL1 ENSGALG00000005931 9379 1.638 - - - - - - 0.793 0.845 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
26. AHCTF1 ENSGALG00000010630 4809 1.637 - - - - - - 0.726 0.911 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
27. MARC1 ENSGALG00000009453 5675 1.632 - - - - - - 0.723 0.909 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
28. XRN2 ENSGALG00000008372 22164 1.624 - - - - 0.898 - 0.726 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
29. SLC35E3 ENSGALG00000009940 8560 1.604 - - - - - - 0.711 0.893 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
30. CTSC ENSGALG00000017239 7651 1.603 - - - - - - 0.702 0.901 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
31. CNOT8 ENSGALG00000003950 8271 1.6 - - - - - - 0.811 0.789 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
32. Mar-05 Mar-05 6330 1.587 - - - - - - 0.729 0.858 - -
33. BCAP29 ENSGALG00000008009 8519 1.587 - - - - - - 0.714 0.873 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
34. PFDN1 ENSGALG00000000946 18822 1.584 - - - - - - 0.762 0.822 - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
35. PSMB2 ENSGALG00000026421 51885 1.581 - - - - 0.809 - 0.772 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
36. UTP6 ENSGALG00000003260 4909 1.58 - - - - - - 0.721 0.859 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
37. GTF2A2 ENSGALG00000003793 5957 1.575 - - - - - - 0.706 0.869 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
38. NIFK ENSGALG00000011650 14990 1.574 - - - - - - 0.717 0.857 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
39. LIMD1 ENSGALG00000035623 7282 1.574 - - - - - - 0.751 0.823 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
40. AZIN1 ENSGALG00000029295 11085 1.573 - - - - 0.856 - 0.717 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
41. TBL1XR1 ENSGALG00000039182 16983 1.559 - - - - - - 0.703 0.856 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
42. TUBB2C TUBB2C 44249 1.517 - - - - 0.761 - 0.756 - - -
43. LEPREL4 LEPREL4 5609 1.515 - - - - - - 0.700 0.815 - -
44. NAA38 ENSGALG00000045783 11229 1.512 - - - - - - 0.721 0.791 - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
45. SART3 ENSGALG00000039472 4948 1.463 - - - - - - 0.757 0.706 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
46. TRAPPC2L ENSGALG00000006250 21772 1.449 - - - - 0.720 - 0.729 - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
47. RNPS1 ENSGALG00000009288 13588 1.434 - - - - - - 0.724 0.710 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
48. RNF113A ENSGALG00000000538 3985 0.989 - - - - 0.989 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
49. TMEM18 ENSGALG00000028744 11779 0.989 - - - - 0.989 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
50. gga-mir-6584 ENSGALG00000028834 1481 0.989 - - - - 0.989 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
51. TBC1D7 ENSGALG00000012731 4891 0.988 - - - - 0.988 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
52. ABCC1 ENSGALG00000006646 2596 0.988 - - - - 0.988 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
53. MRPL46 ENSGALG00000006782 5033 0.988 - - - - 0.988 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
54. MED1 ENSGALG00000001708 9556 0.988 - - - - 0.988 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
55. MAP1B ENSGALG00000014999 6288 0.988 - - - - 0.988 - - - - - microtubule associated protein 1B
56. EPB41L1 ENSGALG00000034171 3616 0.988 - - - - 0.988 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
57. PPAPDC1B PPAPDC1B 6698 0.988 - - - - 0.988 - - - - -
58. NDST2 ENSGALG00000005107 4224 0.988 - - - - 0.988 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
59. MRPL22 ENSGALG00000003919 2760 0.988 - - - - 0.988 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
60. KCTD9 ENSGALG00000000275 3455 0.988 - - - - 0.988 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
61. BCL9 ENSGALG00000037655 4620 0.988 - - - - 0.988 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
62. MYEOV2 MYEOV2 5155 0.987 - - - - 0.987 - - - - -
63. HTRA3 ENSGALG00000034673 512 0.987 - - - - 0.987 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
64. MRPS11 ENSGALG00000006777 16009 0.987 - - - - 0.987 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
65. DNAJC2 ENSGALG00000008249 28064 0.987 - - - - 0.987 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
66. HYOU1 ENSGALG00000007659 3555 0.987 - - - - 0.987 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
67. USP1 ENSGALG00000010957 8297 0.987 - - - - 0.987 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
68. AGPAT3 ENSGALG00000031932 6903 0.986 - - - - 0.986 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
69. CENPE ENSGALG00000013208 12337 0.986 - - - - 0.986 - - - - - centromere protein E, transcript variant X4
70. IBA57 ENSGALG00000005328 4362 0.986 - - - - 0.986 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
71. WHSC1L1 4065 0.986 - - - - 0.986 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
72. NOL6 ENSGALG00000030730 7191 0.986 - - - - 0.986 - - - - - nucleolar protein 6
73. PHKA1 ENSGALG00000004801 2510 0.985 - - - - 0.985 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
74. LUC7L2 ENSGALG00000036238 11817 0.985 - - - - 0.985 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
75. TBRG4 ENSGALG00000038102 9269 0.985 - - - - 0.985 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
76. TRIM33 ENSGALG00000001976 7404 0.985 - - - - 0.985 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
77. NSG1 ENSGALG00000015010 5829 0.984 - - - - 0.984 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
78. THBS1 ENSGALG00000009626 3521 0.984 - - - - 0.984 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
79. TMEM39B ENSGALG00000003287 4125 0.984 - - - - 0.984 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
80. OPTC ENSGALG00000003554 3698 0.984 - - - - 0.984 - - - - - opticin [Source:NCBI gene;Acc:395130]
81. C15H12ORF49 C15H12ORF49 13250 0.983 - - - - 0.983 - - - - -
82. TCF7L2 ENSGALG00000008883 13688 0.982 - - - - 0.982 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
83. RILPL2 ENSGALG00000003321 5632 0.982 - - - - 0.982 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
84. VPS8 ENSGALG00000006704 5419 0.981 - - - - 0.981 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
85. RAB21 ENSGALG00000010183 7718 0.98 - - - - 0.980 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
86. TNPO3 ENSGALG00000039420 5178 0.98 - - - - 0.980 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
87. SAMM50 ENSGALG00000014194 20437 0.979 - - - - 0.979 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
88. M6PR ENSGALG00000031681 9442 0.979 - - - - 0.979 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
89. TM2D2 ENSGALG00000003356 7088 0.979 - - - - 0.979 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
90. MORN4 ENSGALG00000006149 7772 0.977 - - - - 0.977 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
91. ESRP2 ENSGALG00000003374 4436 0.976 - - - - 0.976 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
92. HOXB3 ENSGALG00000043219 5198 0.976 - - - - 0.976 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
93. NUP37 ENSGALG00000012759 9985 0.976 - - - - 0.976 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
94. CREPT CREPT 17142 0.972 - - - - 0.972 - - - - -
95. RALB ENSGALG00000026493 14590 0.972 - - - - 0.972 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
96. PUF60 ENSGALG00000039901 26902 0.971 - - - - 0.971 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
97. UBE2G2 ENSGALG00000005667 12689 0.971 - - - - 0.971 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
98. MCM4 ENSGALG00000012915 13151 0.97 - - - - 0.970 - - - - - minichromosome maintenance complex component 4
99. BRP44L BRP44L 30452 0.97 - - - - 0.970 - - - - -
100. RBM26 ENSGALG00000016910 13769 0.969 - - - - 0.969 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]

There are 877 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA