Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PFDN4

Gene Name Gene ID Reads Annotation
PFDN4 ENSGALG00000007792 26514 prefoldin subunit 4 [Source:NCBI gene;Acc:419337]











Genes with expression patterns similar to PFDN4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PFDN4 ENSGALG00000007792 26514 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
2. LARP7 ENSGALG00000012048 8393 1.585 - - 0.864 - - - - 0.721 - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
3. POLR2D ENSGALG00000002057 14548 0.997 - - - - - - 0.997 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
4. ENSGALG00000004773 ENSGALG00000004773 10418 0.996 - - - - - - 0.996 - - -
5. EIF3J ENSGALG00000008187 43570 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
6. MOB3A ENSGALG00000031729 9690 0.995 - - - - - - 0.995 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
7. IMP4 ENSGALG00000029152 11669 0.995 - - - - - - 0.995 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
8. ATP5MC1 ENSGALG00000001330 37766 0.995 - - - - - - 0.995 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
9. M6PR ENSGALG00000031681 9442 0.994 - - - - - - 0.994 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
10. POLR1C ENSGALG00000010349 7059 0.994 - - - - - - 0.994 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
11. HOXD8 ENSGALG00000037272 4338 0.993 - - - - - - 0.993 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
12. MRPL32 ENSGALG00000037258 6861 0.993 - - - - - - 0.993 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
13. CTU2 4818 0.992 - - - - - - 0.992 - - - cytosolic thiouridylase subunit 2, transcript variant X3
14. CAND1 4541 0.991 - - - - - - 0.991 - - - cullin associated and neddylation dissociated 1
15. SMC2 ENSGALG00000015691 34013 0.991 - - - - - - 0.991 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
16. PTBP2 ENSGALG00000005552 3443 0.991 - - - - - - 0.991 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
17. FBN3 ENSGALG00000037625 23313 0.991 - - - - - - 0.991 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
18. EGFLAM ENSGALG00000003726 4588 0.991 - - - - - - 0.991 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
19. FAM103A1 17380 0.99 - - - - - - 0.990 - - - family with sequence similarity 103 member A1, transcript variant X2
20. ENSGALG00000014190 ENSGALG00000014190 5735 0.99 - - - - - - 0.990 - - -
21. TMEM97 ENSGALG00000005702 2037 0.99 - - - - - - 0.990 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
22. TMEM62 ENSGALG00000009260 1170 0.99 - - - - - - 0.990 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
23. TMC1 ENSGALG00000015145 1180 0.99 - - - - - - 0.990 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
24. TMEM120B ENSGALG00000004254 2819 0.99 - - - - - - 0.990 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
25. PHGDH ENSGALG00000002988 6912 0.99 - - - - - - 0.990 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
26. BMP3 ENSGALG00000035052 3260 0.99 - - - - - - 0.990 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
27. ABCC10 2213 0.99 - - - - - - 0.990 - - - ATP binding cassette subfamily C member 10, transcript variant X10
28. DENR ENSGALG00000003795 30805 0.989 - - - - - - 0.989 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
29. PRDX6 ENSGALG00000003053 17928 0.988 - - - - - - 0.988 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
30. DYNLL2 ENSGALG00000005522 17107 0.988 - - - - - - 0.988 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
31. DDX21 ENSGALG00000004144 13105 0.988 - - - - - - 0.988 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
32. MCM2 ENSGALG00000006037 13458 0.987 - - - - - - 0.987 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
33. ITGA1 ENSGALG00000014891 11378 0.982 - - - - - - 0.982 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
34. CHNTHL1 CHNTHL1 4976 0.979 - - - - - - 0.979 - - -
35. CALM_1 CALM_1 57812 0.959 - - - - - - 0.959 - - -
36. ALDH1A2 ENSGALG00000004270 49483 0.943 - - - - - - 0.943 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
37. UQCRFS1 ENSGALG00000025819 66637 0.922 - - - - - - 0.922 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
38. ATP2A2 ENSGALG00000032287 12734 0.911 - - - - - - 0.911 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
39. MRPS33 ENSGALG00000028879 17966 0.885 - - 0.885 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
40. AMBRA1 ENSGALG00000008358 2865 0.879 - - 0.879 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
41. AMFR ENSGALG00000003107 6560 0.874 - - 0.874 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
42. DERL2 ENSGALG00000041844 4509 0.873 - - 0.873 - - - - - - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
43. FBXO45 ENSGALG00000037281 3936 0.87 - - 0.870 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
44. SOBP ENSGALG00000043047 147 0.869 - - 0.869 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
45. AKT3 ENSGALG00000034081 866 0.869 - - 0.869 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
46. ATP6V1E1 ENSGALG00000013036 13497 0.868 - - 0.868 - - - - - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
47. C18orf8 C18orf8 1512 0.865 - - 0.865 - - - - - - -
48. OGFOD2 ENSGALG00000003687 1200 0.865 - - 0.865 - - - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25823]
49. ATP10D ENSGALG00000014192 94 0.865 - - 0.865 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
50. IFT81 ENSGALG00000003854 2534 0.864 - - 0.864 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
51. UBE2E3 ENSGALG00000020793 9517 0.864 - - 0.864 - - - - - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
52. DNAJC24 ENSGALG00000012130 1882 0.863 - - 0.863 - - - - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
53. CHAMP1 ENSGALG00000016813 508 0.863 - - 0.863 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
54. PSMD14 ENSGALG00000011128 13335 0.862 - - 0.862 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
55. TMEM242 ENSGALG00000013689 377 0.862 - - 0.862 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
56. IFT57 ENSGALG00000015356 5540 0.862 - - 0.862 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
57. RALGDS ENSGALG00000003412 4478 0.861 - - 0.861 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
58. HPS5 ENSGALG00000027716 2466 0.86 - - 0.860 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
59. STAMBP ENSGALG00000042555 1362 0.859 - - 0.859 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
60. ATF7IP ENSGALG00000011814 1571 0.859 - - 0.859 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
61. TCTN2 ENSGALG00000023683 3596 0.858 - - 0.858 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
62. SEC22B ENSGALG00000039704 16080 0.858 - - 0.858 - - - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
63. PEMT ENSGALG00000004875 4094 0.858 - - 0.858 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
64. GTF2H2 ENSGALG00000002399 2361 0.857 - - 0.857 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
65. GFER ENSGALG00000005579 1367 0.857 - - 0.857 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
66. HYAL3 ENSGALG00000029000 712 0.857 - - 0.857 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
67. ENSGALG00000004703 ENSGALG00000004703 112 0.857 - - 0.857 - - - - - - -
68. ENSGALG00000020103 ENSGALG00000020103 64 0.857 - - 0.857 - - - - - - -
69. L3MBTL3 ENSGALG00000034030 113 0.856 - - 0.856 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
70. HYAL1 ENSGALG00000000785 1778 0.855 - - 0.855 - - - - - - - hyaluronoglucosaminidase 1, transcript variant X3
71. SLC3A1 ENSGALG00000009973 608 0.855 - - 0.855 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
72. RRN3 ENSGALG00000041989 3934 0.855 - - 0.855 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
73. NXPE3 ENSGALG00000015344 111 0.855 - - 0.855 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
74. UBN1 ENSGALG00000031416 2848 0.854 - - 0.854 - - - - - - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
75. RAD54L2 ENSGALG00000003243 187 0.854 - - 0.854 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
76. BBS5 ENSGALG00000009846 344 0.854 - - 0.854 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
77. PTDSS2 ENSGALG00000004300 682 0.854 - - 0.854 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
78. ITGB4 ENSGALG00000002389 44 0.853 - - 0.853 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
79. ATP8B4 ENSGALG00000002326 456 0.853 - - 0.853 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
80. UEVLD ENSGALG00000006342 164 0.853 - - 0.853 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
81. TDRD6 48 0.853 - - 0.853 - - - - - - - tudor domain containing 6
82. RQCD1 RQCD1 110 0.853 - - 0.853 - - - - - - -
83. SZT2 ENSGALG00000028561 255 0.853 - - 0.853 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
84. ENSGALG00000002020 ENSGALG00000002020 183 0.853 - - 0.853 - - - - - - -
85. ENSGALG00000028964 ENSGALG00000028964 46 0.853 - - 0.853 - - - - - - -
86. F2R ENSGALG00000014983 106 0.853 - - 0.853 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
87. CDC14B ENSGALG00000012627 110 0.853 - - 0.853 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
88. MRC2 ENSGALG00000000461 48 0.853 - - 0.853 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
89. ITM2B ENSGALG00000016996 1112 0.852 - - 0.852 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
90. ABCC3 ENSGALG00000007522 340 0.852 - - 0.852 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
91. MLLT3 ENSGALG00000015078 502 0.852 - - 0.852 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
92. PIGK ENSGALG00000009015 7942 0.852 - - 0.852 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
93. U4 U4 69 0.852 - - 0.852 - - - - - - -
94. MRPS11 ENSGALG00000006777 16009 0.852 - - 0.852 - - - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
95. TRIM13 ENSGALG00000017011 92 0.851 - - 0.851 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
96. RPS6KB1 ENSGALG00000005198 169 0.851 - - 0.851 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
97. SHMT1 ENSGALG00000005046 1430 0.851 - - 0.851 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
98. ADK ENSGALG00000005057 199 0.851 - - 0.851 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
99. APTX ENSGALG00000001954 692 0.85 - - 0.850 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
100. SMARCAD1 ENSGALG00000037339 149 0.85 - - 0.850 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]

There are 376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA