Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PFDN1

Gene Name Gene ID Reads Annotation
PFDN1 ENSGALG00000000946 18822 prefoldin subunit 1 [Source:NCBI gene;Acc:416142]











Genes with expression patterns similar to PFDN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PFDN1 ENSGALG00000000946 18822 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
2. MARC1 ENSGALG00000009453 5675 2.34 - - 0.838 - - - 0.703 0.799 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
3. NDUFB3 ENSGALG00000008239 15511 1.781 - - - - - - 0.899 0.882 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
4. CHMP3 ENSGALG00000015805 11581 1.653 - - - - - - 0.813 0.840 - - charged multivesicular body protein 3
5. CNOT8 ENSGALG00000003950 8271 1.608 - - - - - - 0.755 0.853 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
6. PGAM5 ENSGALG00000002137 7700 1.584 - - - - - - 0.762 0.822 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
7. ARID2 ENSGALG00000033074 3461 1.563 - - 0.762 - - - 0.801 - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
8. FXR1 ENSGALG00000008864 10250 1.558 - - - - - - 0.706 0.852 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
9. ERGIC2 ENSGALG00000007183 12870 1.548 - - - - - - 0.762 0.786 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
10. MRPL20 ENSGALG00000001542 28764 1.547 - - - - - - 0.716 0.831 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
11. PPCS ENSGALG00000004882 5759 1.543 - - - - - - 0.764 0.779 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
12. QDPR ENSGALG00000030070 6953 1.541 - - 0.777 - - - 0.764 - - - quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
13. NDUFC2 ENSGALG00000029172 26136 1.535 - - 0.749 - - - 0.786 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
14. HNRNPD ENSGALG00000011184 10686 1.532 - - - - - - 0.723 0.809 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
15. SLC35E3 ENSGALG00000009940 8560 1.529 - - - - - - 0.747 0.782 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
16. SCCPDH ENSGALG00000010641 8624 1.525 - - 0.768 - - - 0.757 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
17. SMDT1 ENSGALG00000011897 9360 1.524 - - - - - - 0.715 0.809 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
18. SPDL1 ENSGALG00000001942 4403 1.524 - - 0.799 - - - 0.725 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
19. PDHA1 ENSGALG00000016430 7070 1.507 - - 0.718 - - - - 0.789 - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
20. RNF214 ENSGALG00000036993 3729 1.506 - - 0.761 - - - - 0.745 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
21. TMEM167A ENSGALG00000027332 13862 1.503 - - 0.715 - - - 0.788 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
22. PIGK ENSGALG00000009015 7942 1.495 - - 0.734 - - - - 0.761 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
23. LARP7 ENSGALG00000012048 8393 1.486 - - 0.747 - - - 0.739 - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
24. RBBP8 ENSGALG00000014982 3255 1.476 - - 0.758 - - - 0.718 - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
25. NR2F2 ENSGALG00000007000 4911 1.428 - - 0.714 - - - - 0.714 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
26. GMPPB ENSGALG00000002500 9454 1.427 - - 0.704 - - - 0.723 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
27. gga-mir-1772 ENSGALG00000025300 2892 1.408 - - - - - - 0.702 0.706 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
28. ECHS1 ENSGALG00000024271 9364 0.888 - - - - - - - 0.888 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
29. SCO1 ENSGALG00000030475 7304 0.866 - - - - - - - 0.866 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
30. STAG2 ENSGALG00000008482 13629 0.864 - - - - - - - 0.864 - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
31. UTP6 ENSGALG00000003260 4909 0.862 - - 0.862 - - - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
32. MRPL30 ENSGALG00000016760 16965 0.859 - - - - - - 0.859 - - - mitochondrial ribosomal protein L30
33. Mar-05 Mar-05 6330 0.851 - - - - - - - 0.851 - -
34. UBE2D1 ENSGALG00000021213 5876 0.851 - - - - - - - 0.851 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
35. LLPH ENSGALG00000019358 20976 0.848 - - - - - - 0.848 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
36. DPYD ENSGALG00000005509 4115 0.848 - - - - - - - 0.848 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
37. TSC22D2 ENSGALG00000027591 6594 0.848 - - - - - - - 0.848 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
38. CTSC ENSGALG00000017239 7651 0.841 - - - - - - - 0.841 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
39. SNAI2 ENSGALG00000030902 8201 0.841 - - - - - - - 0.841 - - snail family transcriptional repressor 2
40. FAR-1 FAR-1 1855 0.837 - - 0.837 - - - - - - -
41. SEPHS1 ENSGALG00000014575 10701 0.837 - - 0.837 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
42. EFTUD2 ENSGALG00000000988 17913 0.837 - - - - - - - 0.837 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
43. GFPT1 ENSGALG00000036391 14025 0.835 - - - - - - - 0.835 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
44. VATB VATB 13756 0.834 - - - - - - 0.834 - - -
45. ADRM1 ENSGALG00000005200 5417 0.833 - - - - - - 0.833 - - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
46. ECHDC2 ENSGALG00000010647 4413 0.833 - - - - - - 0.833 - - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
47. PALLD ENSGALG00000009650 10803 0.832 - - - - - - - 0.832 - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
48. SLC37A3 ENSGALG00000012849 836 0.832 - - 0.832 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
49. BTG1 ENSGALG00000011276 17496 0.83 - - - - - - - 0.830 - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
50. CHTF8 ENSGALG00000000632 7230 0.83 - - - - - - 0.830 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
51. CDCA4 ENSGALG00000011692 10381 0.829 - - - - - - - 0.829 - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
52. MAPK9 ENSGALG00000039099 5467 0.828 - - - - - - - 0.828 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
53. BCAP29 ENSGALG00000008009 8519 0.826 - - - - - - - 0.826 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
54. KIAA0020 KIAA0020 14353 0.825 - - - - - - 0.825 - - -
55. ECI1 ENSGALG00000031563 11326 0.825 - - - - - - 0.825 - - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
56. NAE1 ENSGALG00000038957 13777 0.825 - - - - - - - 0.825 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
57. BAG5 ENSGALG00000031062 4498 0.825 - - 0.825 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
58. MRPL18 ENSGALG00000011625 7855 0.825 - - - - - - - 0.825 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
59. ZNF326 ENSGALG00000006113 15141 0.823 - - - - - - - 0.823 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
60. ABCE1 ENSGALG00000009961 958 0.823 - - 0.823 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
61. ZNRF1 ENSGALG00000029017 1429 0.823 - - 0.823 - - - - - - - zinc and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:18452]
62. PREP ENSGALG00000015405 17050 0.822 - - - - - - 0.822 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
63. CHMP6 ENSGALG00000026428 18026 0.822 - - - - - - - 0.822 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
64. MRPL51 ENSGALG00000014435 29348 0.821 - - - - - - - 0.821 - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
65. GNG2 ENSGALG00000027629 9404 0.821 - - - - - - 0.821 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
66. BID ENSGALG00000013039 12427 0.821 - - - - - - - 0.821 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
67. CDC5L ENSGALG00000016704 22893 0.821 - - 0.821 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
68. MBSP MBSP 5634 0.82 - - 0.820 - - - - - - -
69. TIAR TIAR 2471 0.819 - - 0.819 - - - - - - -
70. MRPS33 ENSGALG00000028879 17966 0.819 - - 0.819 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
71. CNTRL ENSGALG00000001513 1773 0.819 - - 0.819 - - - - - - - centriolin [Source:NCBI gene;Acc:417121]
72. TAF5 ENSGALG00000008241 5227 0.818 - - 0.818 - - - - - - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
73. FANCL ENSGALG00000030022 7423 0.816 - - - - - - 0.816 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
74. RIOK2 ENSGALG00000015288 6280 0.816 - - - - - - 0.816 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
75. NGF ENSGALG00000002556 122 0.816 - - 0.816 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
76. UBE2V1 ENSGALG00000008015 17947 0.816 - - - - - - 0.816 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
77. C11H16ORF80 C11H16ORF80 18673 0.815 - - - - - - 0.815 - - -
78. TSG101 ENSGALG00000006312 8289 0.815 - - - - - - 0.815 - - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
79. FBXO45 ENSGALG00000037281 3936 0.813 - - 0.813 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
80. ARID3A ENSGALG00000026231 867 0.813 - - 0.813 - - - - - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
81. STARD3NL ENSGALG00000033038 4851 0.813 - - 0.813 - - - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
82. POGZ ENSGALG00000036365 4056 0.812 - - 0.812 - - - - - - - pogo transposable element with ZNF domain, transcript variant X2
83. AVENAII AVENAII 4552 0.812 - - 0.812 - - - - - - -
84. BEND5 ENSGALG00000010505 3298 0.812 - - 0.812 - - - - - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
85. SPCS3 ENSGALG00000010839 19106 0.812 - - 0.812 - - - - - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
86. SELM SELM 6366 0.812 - - 0.812 - - - - - - -
87. STAU1 ENSGALG00000004736 3828 0.811 - - 0.811 - - - - - - - staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
88. SUCLG2 ENSGALG00000007652 9688 0.81 - - - - - - 0.810 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
89. PTPN2 ENSGALG00000013867 1128 0.807 - - 0.807 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
90. NDUFB1 ENSGALG00000028537 2059 0.807 - - 0.807 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
91. KLHL24 ENSGALG00000002277 2203 0.807 - - 0.807 - - - - - - - kelch like family member 24 [Source:NCBI gene;Acc:424763]
92. DAD1 ENSGALG00000035626 32604 0.807 - - - - - - 0.807 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
93. ENY2 ENSGALG00000036618 30314 0.806 - - - - - - 0.806 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
94. HINT3 ENSGALG00000044342 5674 0.806 - - 0.806 - - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
95. ADK ENSGALG00000005057 199 0.805 - - 0.805 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
96. ATP8B4 ENSGALG00000002326 456 0.805 - - 0.805 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
97. FTD FTD 3041 0.805 - - 0.805 - - - - - - -
98. RBM27 ENSGALG00000007516 3909 0.805 - - - - - - 0.805 - - - RNA binding motif protein 27, transcript variant X3
99. NACAD 679 0.805 - - 0.805 - - - - - - - NAC alpha domain containing, transcript variant X1
100. MYCBP2 ENSGALG00000016915 2374 0.804 - - 0.804 - - - - - - - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]

There are 629 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA