Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PEX6

Gene Name Gene ID Reads Annotation
PEX6 ENSGALG00000045514 4582 peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]











Genes with expression patterns similar to PEX6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PEX6 ENSGALG00000045514 4582 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
2. SRPK1 ENSGALG00000037546 1849 0.944 - - - - - - 0.944 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
3. MPST ENSGALG00000040840 2122 0.932 - - - - - - 0.932 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
4. USP54 ENSGALG00000005232 2749 0.924 - - - - - - 0.924 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
5. MBNL2 ENSGALG00000016890 3162 0.921 - - - - - - 0.921 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
6. SUGP1 ENSGALG00000042132 2771 0.918 - - - - - - 0.918 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
7. DIEXF ENSGALG00000009887 4782 0.917 - - - - - - 0.917 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
8. TM9SF4 ENSGALG00000006568 567 0.916 - - - - - - 0.916 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
9. SLC25A21 ENSGALG00000010117 536 0.915 - - - - - - 0.915 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
10. RBL1 ENSGALG00000001332 2568 0.915 - - - - - - 0.915 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
11. PLCE1 ENSGALG00000039528 151 0.914 - - - - - - 0.914 - - - phospholipase C epsilon 1
12. RBM34 ENSGALG00000029915 5618 0.914 - - - - - - 0.914 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
13. PGAP2 ENSGALG00000027762 2583 0.912 - - - - - - 0.912 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
14. INTS7 ENSGALG00000009843 2395 0.91 - - - - - - 0.910 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
15. MBNL1 ENSGALG00000029190 3953 0.904 - - - - - - 0.904 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
16. HYOU1 ENSGALG00000007659 3555 0.902 - - - - - - 0.902 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
17. TM2D3 ENSGALG00000026271 2566 0.902 - - - - - - 0.902 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
18. MORC3 ENSGALG00000036556 2976 0.898 - - - - - - 0.898 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
19. MSL3 ENSGALG00000041433 2957 0.898 - - - - - - 0.898 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
20. GAS6 ENSGALG00000016820 481 0.898 - - - - - - 0.898 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
21. WIPI1 ENSGALG00000004215 3359 0.897 - - - - - - 0.897 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
22. UBE3B ENSGALG00000013851 1672 0.896 - - - - - - 0.896 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
23. EIF3I ENSGALG00000003337 28832 0.894 - - - - - - 0.894 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
24. SGSM3 ENSGALG00000012033 1839 0.893 - - - - - - 0.893 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
25. SMAD5 ENSGALG00000006309 1748 0.892 - - - - - - 0.892 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
26. ENSGALG00000028164 ENSGALG00000028164 3325 0.891 - - - - - - 0.891 - - -
27. MED16 ENSGALG00000001978 2387 0.891 - - - - - - 0.891 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
28. WDR47 ENSGALG00000002129 2624 0.891 - - - - - - 0.891 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
29. EFNB2 ENSGALG00000029175 5664 0.89 - - - - - - 0.890 - - - ephrin B2 [Source:NCBI gene;Acc:395625]
30. WDSUB1 ENSGALG00000012574 2038 0.89 - - - - - - 0.890 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
31. SUN1 ENSGALG00000003781 3442 0.89 - - - - - - 0.890 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
32. ENSGALG00000002852 ENSGALG00000002852 2687 0.889 - - - - - - 0.889 - - -
33. PKN3 532 0.889 - - - - - - 0.889 - - - protein kinase N3, transcript variant X2
34. HELLS ENSGALG00000005451 7094 0.888 - - - - - - 0.888 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
35. GPN3 ENSGALG00000003807 6320 0.887 - - - - - - 0.887 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
36. RPIA ENSGALG00000015960 2784 0.887 - - - - - - 0.887 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
37. NSRP1 ENSGALG00000004186 1683 0.885 - - - - - - 0.885 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
38. USP8 ENSGALG00000005894 4499 0.885 - - - - - - 0.885 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
39. SCLT1 2397 0.885 - - - - - - 0.885 - - - sodium channel and clathrin linker 1, transcript variant X6
40. MRPL10 ENSGALG00000014387 12386 0.884 - - - - - - 0.884 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
41. PALD1 ENSGALG00000004465 3553 0.884 - - - - - - 0.884 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
42. ENSGALG00000016099 ENSGALG00000016099 138 0.884 - - - - - - 0.884 - - -
43. FAM193A ENSGALG00000015667 3075 0.884 - - - - - - 0.884 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
44. ATM ENSGALG00000017159 893 0.883 - - - - - - 0.883 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
45. NPHP4 ENSGALG00000000966 1698 0.883 - - - - - - 0.883 - - - nephrocystin 4, transcript variant X5
46. FAM183A 242 0.882 - - - - - - 0.882 - - - family with sequence similarity 183 member A, transcript variant 2
47. ENTPD8L ENSGALG00000008936 731 0.882 - - - - - - 0.882 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
48. PTN ENSGALG00000040493 864 0.881 - - - - - - 0.881 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
49. SDK2 ENSGALG00000031895 2682 0.879 - - - - - - 0.879 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
50. SCUBE1 ENSGALG00000014178 91 0.879 - - - - - - 0.879 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
51. MESDC1 1013 0.879 - - - - - - 0.879 - - - mesoderm development candidate 1
52. GRB14 ENSGALG00000020703 42 0.879 - - - - - - 0.879 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
53. MXRA5 ENSGALG00000016635 352 0.878 - - - - - - 0.878 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
54. HESX1 ENSGALG00000005506 203 0.878 - - - - - - 0.878 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
55. SPG11 ENSGALG00000008180 1890 0.878 - - - - - - 0.878 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
56. GPC3 ENSGALG00000006087 3744 0.878 - - - - - - 0.878 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
57. RCAN3 ENSGALG00000004282 7778 0.878 - - - - - - 0.878 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
58. SCAF4 ENSGALG00000033965 2027 0.877 - - - - - - 0.877 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
59. METTL24 ENSGALG00000041120 60 0.877 - - - - - - 0.877 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
60. SNORA31 SNORA31 183 0.877 - - - - - - 0.877 - - -
61. MBTPS1 ENSGALG00000003293 4843 0.877 - - - - - - 0.877 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
62. ETAA1 ENSGALG00000027922 1684 0.877 - - - - - - 0.877 - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
63. ENSGALG00000026925 ENSGALG00000026925 119 0.877 - - - - - - 0.877 - - -
64. HEMK1 ENSGALG00000002253 40 0.877 - - - - - - 0.877 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
65. TCTE1 ENSGALG00000010165 65 0.877 - - - - - - 0.877 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
66. NUP205 ENSGALG00000011662 4157 0.876 - - - - - - 0.876 - - - nucleoporin 205
67. ENSGALG00000013233 ENSGALG00000013233 3265 0.876 - - - - - - 0.876 - - -
68. NCAPG2 ENSGALG00000006525 2319 0.876 - - - - - - 0.876 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
69. DNAJC16 ENSGALG00000032832 750 0.875 - - - - - - 0.875 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
70. RAB1A ENSGALG00000031582 6929 0.875 - - - - - - 0.875 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
71. FAM57A ENSGALG00000004820 1492 0.874 - - - - - - 0.874 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
72. IFT74 ENSGALG00000001801 1932 0.874 - - - - - - 0.874 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
73. MST1 ENSGALG00000002722 994 0.873 - - - - - - 0.873 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
74. ENSGALG00000003619 ENSGALG00000003619 58 0.873 - - - - - - 0.873 - - -
75. CEP290 ENSGALG00000011177 1559 0.873 - - - - - - 0.873 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
76. JMJD7 ENSGALG00000026846 1320 0.873 - - - - - - 0.873 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
77. RFT1 ENSGALG00000001945 2446 0.87 - - - - - - 0.870 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
78. CDC73 ENSGALG00000002469 4586 0.868 - - - - - - 0.868 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
79. SPAG9 ENSGALG00000034001 2314 0.867 - - - - - - 0.867 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
80. LFNG ENSGALG00000038515 5178 0.866 - - - - - - 0.866 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
81. XPO7 ENSGALG00000001838 1875 0.866 - - - - - - 0.866 - - - exportin 7 [Source:NCBI gene;Acc:426925]
82. ZFYVE19 ENSGALG00000008460 2750 0.866 - - - - - - 0.866 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
83. RNF20 ENSGALG00000015548 7199 0.866 - - - - - - 0.866 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
84. PIK3R3 ENSGALG00000010335 374 0.865 - - - - - - 0.865 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
85. C14orf80 C14orf80 1921 0.865 - - - - - - 0.865 - - -
86. OCRL ENSGALG00000003920 1812 0.864 - - - - - - 0.864 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
87. TNFAIP8 ENSGALG00000027761 2383 0.864 - - - - - - 0.864 - - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
88. NIN ENSGALG00000012361 2284 0.863 - - - - - - 0.863 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
89. ZYX ENSGALG00000014688 8686 0.863 - - - - - - 0.863 - - - zyxin [Source:NCBI gene;Acc:418300]
90. ASB6 ENSGALG00000004378 1080 0.862 - - - - - - 0.862 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
91. B4GALT3 ENSGALG00000022891 2825 0.862 - - - - - - 0.862 - - - beta-1,4-galactosyltransferase 3
92. CCNL1 ENSGALG00000009699 1033 0.862 - - - - - - 0.862 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
93. FN3KRP ENSGALG00000028979 4160 0.862 - - - - - - 0.862 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
94. MGLL ENSGALG00000032736 612 0.861 - - - - - - 0.861 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
95. CNOT10 ENSGALG00000011494 2614 0.861 - - - - - - 0.861 - - - CCR4-NOT transcription complex subunit 10 [Source:NCBI gene;Acc:420669]
96. COPS8 ENSGALG00000033385 10166 0.86 - - - - - - 0.860 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
97. ERMP1 ENSGALG00000000438 1136 0.859 - - - - - - 0.859 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
98. FTSJ2 FTSJ2 2951 0.858 - - - - - - 0.858 - - -
99. UPK3BL ENSGALG00000001885 1650 0.858 - - - - - - 0.858 - - - uroplakin 3B-like
100. ALDH18A1 ENSGALG00000034655 3038 0.857 - - - - - - 0.857 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13

There are 175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA