Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PEX16

Gene Name Gene ID Reads Annotation
PEX16 ENSGALG00000008421 3684 peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]











Genes with expression patterns similar to PEX16

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PEX16 ENSGALG00000008421 3684 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
2. CCDC101 CCDC101 9111 1.637 - - - - - - 0.865 - - 0.772
3. CSTF3 ENSGALG00000011685 4711 1.62 - - - - - - 0.840 - - 0.780 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
4. ZNF142 ENSGALG00000011393 2078 1.575 - - - - - - 0.793 - - 0.782 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
5. LIMCH1 ENSGALG00000014258 1987 1.541 - - - - - - 0.815 - - 0.726 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
6. COQ7 ENSGALG00000006861 5118 1.504 - - - - - - 0.747 - - 0.757 coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
7. EFNB2 ENSGALG00000029175 5664 1.503 - - - - - - 0.761 - - 0.742 ephrin B2 [Source:NCBI gene;Acc:395625]
8. TXNRD2 ENSGALG00000001988 1208 1.501 - - - - - - - 0.701 - 0.800 thioredoxin reductase 2 [Source:NCBI gene;Acc:416782]
9. E2F7 ENSGALG00000031340 3430 1.499 - - - - - - 0.727 0.772 - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
10. RIT1 ENSGALG00000014647 7174 1.498 - - - - - - 0.779 0.719 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
11. ATP6V0A1 ENSGALG00000003256 4408 1.447 - - - - - - 0.711 0.736 - - ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
12. BMI1 ENSGALG00000041267 6618 0.905 - - - - - - 0.905 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
13. PAPD7 ENSGALG00000013061 2031 0.904 - - - - - - 0.904 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
14. SPAG9 ENSGALG00000034001 2314 0.893 - - - - - - 0.893 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
15. TM2D3 ENSGALG00000026271 2566 0.887 - - - - - - 0.887 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
16. PKN3 532 0.881 - - - - - - 0.881 - - - protein kinase N3, transcript variant X2
17. RBL1 ENSGALG00000001332 2568 0.881 - - - - - - 0.881 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
18. CMSS1 ENSGALG00000015267 2954 0.88 - - - - - - 0.880 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
19. PARL ENSGALG00000002315 15943 0.878 - - - - - - 0.878 - - - presenilin associated rhomboid like
20. SCAF4 ENSGALG00000033965 2027 0.877 - - - - - - 0.877 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
21. SELM SELM 6366 0.876 - - - - - - 0.876 - - -
22. SPG11 ENSGALG00000008180 1890 0.876 - - - - - - 0.876 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
23. MED16 ENSGALG00000001978 2387 0.876 - - - - - - 0.876 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
24. GGA.8379 GGA.8379 4419 0.875 - - - - - - 0.875 - - -
25. NDRG3 ENSGALG00000001492 5919 0.874 - - - - - - 0.874 - - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
26. CDC42SE2 ENSGALG00000027258 4725 0.873 - - - - - - 0.873 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
27. UBE3B ENSGALG00000013851 1672 0.872 - - - - - - 0.872 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
28. NIN ENSGALG00000012361 2284 0.872 - - - - - - 0.872 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
29. PGAP2 ENSGALG00000027762 2583 0.871 - - - - - - 0.871 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
30. NEK4 ENSGALG00000041428 4473 0.871 - - - - - - 0.871 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
31. CCNE2 ENSGALG00000040794 1229 0.869 - - - - - - 0.869 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
32. WIPI1 ENSGALG00000004215 3359 0.868 - - - - - - 0.868 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
33. SDK2 ENSGALG00000031895 2682 0.867 - - - - - - 0.867 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
34. RCAN3 ENSGALG00000004282 7778 0.867 - - - - - - 0.867 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
35. FAM193A ENSGALG00000015667 3075 0.866 - - - - - - 0.866 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
36. MESDC1 1013 0.865 - - - - - - 0.865 - - - mesoderm development candidate 1
37. SUN1 ENSGALG00000003781 3442 0.864 - - - - - - 0.864 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
38. FTSJ2 FTSJ2 2951 0.863 - - - - - - 0.863 - - -
39. SGSM3 ENSGALG00000012033 1839 0.863 - - - - - - 0.863 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
40. ENSGALG00000013233 ENSGALG00000013233 3265 0.861 - - - - - - 0.861 - - -
41. MBTPS1 ENSGALG00000003293 4843 0.861 - - - - - - 0.861 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
42. CACNA2D2 ENSGALG00000038242 2078 0.861 - - - - - - - - - 0.861 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
43. ENSGALG00000028164 ENSGALG00000028164 3325 0.86 - - - - - - 0.860 - - -
44. FAM57A ENSGALG00000004820 1492 0.859 - - - - - - 0.859 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
45. NCAPG2 ENSGALG00000006525 2319 0.859 - - - - - - 0.859 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
46. RAB1A ENSGALG00000031582 6929 0.859 - - - - - - 0.859 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
47. DIEXF ENSGALG00000009887 4782 0.858 - - - - - - 0.858 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
48. C14orf80 C14orf80 1921 0.857 - - - - - - 0.857 - - -
49. CANX ENSGALG00000032148 11297 0.857 - - - - - - 0.857 - - - calnexin [Source:NCBI gene;Acc:416288]
50. LONP1 ENSGALG00000040492 7133 0.857 - - - - - - 0.857 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
51. SRP72 ENSGALG00000011403 13666 0.857 - - - - - - 0.857 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
52. ERMP1 ENSGALG00000000438 1136 0.856 - - - - - - 0.856 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
53. IK ENSGALG00000037172 12100 0.856 - - - - - - 0.856 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
54. LFNG ENSGALG00000038515 5178 0.855 - - - - - - 0.855 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
55. USP20 ENSGALG00000041104 3186 0.854 - - - - - - 0.854 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
56. ASB6 ENSGALG00000004378 1080 0.854 - - - - - - 0.854 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
57. MTDH ENSGALG00000034050 9525 0.851 - - - - - - 0.851 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
58. CCNL1 ENSGALG00000009699 1033 0.851 - - - - - - 0.851 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
59. NET1 ENSGALG00000008437 9850 0.851 - - - - - - - - - 0.851 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
60. EDEM2 ENSGALG00000003128 3338 0.85 - - - - - - - - - 0.850 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
61. COPS8 ENSGALG00000033385 10166 0.85 - - - - - - 0.850 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
62. PDCD4 ENSGALG00000008700 574 0.849 - - - - - - - - - 0.849 programmed cell death 4 [Source:NCBI gene;Acc:374191]
63. NUP205 ENSGALG00000011662 4157 0.847 - - - - - - 0.847 - - - nucleoporin 205
64. ENTPD8L ENSGALG00000008936 731 0.846 - - - - - - 0.846 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
65. TOP3B ENSGALG00000030051 5953 0.846 - - - - - - 0.846 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
66. CEP290 ENSGALG00000011177 1559 0.846 - - - - - - 0.846 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
67. PIK3R3 ENSGALG00000010335 374 0.844 - - - - - - 0.844 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
68. USP54 ENSGALG00000005232 2749 0.843 - - - - - - 0.843 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
69. CDC73 ENSGALG00000002469 4586 0.843 - - - - - - 0.843 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
70. DNAJC16 ENSGALG00000032832 750 0.843 - - - - - - 0.843 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
71. TMEM135 2283 0.843 - - - - - - 0.843 - - - transmembrane protein 135, transcript variant X4
72. TRIP4 ENSGALG00000030672 1255 0.842 - - - - - - - - - 0.842 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
73. GPN3 ENSGALG00000003807 6320 0.842 - - - - - - 0.842 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
74. ITSN1 ENSGALG00000036677 5727 0.84 - - - - - - 0.840 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
75. SNRNP48 ENSGALG00000013005 1468 0.84 - - - - - - 0.840 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
76. DNPEP ENSGALG00000011318 10623 0.84 - - - - - - 0.840 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
77. HESX1 ENSGALG00000005506 203 0.839 - - - - - - 0.839 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
78. ANGEL1 ENSGALG00000010372 1763 0.839 - - - - - - - - - 0.839 angel homolog 1 [Source:NCBI gene;Acc:423370]
79. PLXNA4 ENSGALG00000006473 125 0.839 - - - - - - - - - 0.839 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
80. ZFYVE19 ENSGALG00000008460 2750 0.839 - - - - - - 0.839 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
81. FAM183A 242 0.839 - - - - - - 0.839 - - - family with sequence similarity 183 member A, transcript variant 2
82. NEFM ENSGALG00000000317 6992 0.838 - - - - - - 0.838 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
83. PDHX ENSGALG00000033753 2799 0.838 - - - - - - 0.838 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
84. MASP1 ENSGALG00000007419 141 0.837 - - - - - - - - - 0.837 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
85. HEATR5A 1233 0.837 - - - - - - - - - 0.837 HEAT repeat containing 5A, transcript variant X7
86. SRA1 ENSGALG00000040453 266 0.837 - - - - - - - - - 0.837 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
87. RPIA ENSGALG00000015960 2784 0.837 - - - - - - 0.837 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
88. WDSUB1 ENSGALG00000012574 2038 0.836 - - - - - - 0.836 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
89. PALD1 ENSGALG00000004465 3553 0.835 - - - - - - 0.835 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
90. RAB34 ENSGALG00000026315 1193 0.835 - - - - - - - - - 0.835 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
91. PIF1 ENSGALG00000009032 2342 0.834 - - - - - - 0.834 - - - PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]
92. PCDH18 ENSGALG00000009732 6634 0.834 - - - - - - - - - 0.834 protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
93. WDR47 ENSGALG00000002129 2624 0.834 - - - - - - 0.834 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
94. LUZP1 ENSGALG00000025858 947 0.833 - - - - - - - - - 0.833 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
95. MBNL2 ENSGALG00000016890 3162 0.833 - - - - - - 0.833 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
96. INPP5B ENSGALG00000001606 458 0.832 - - - - - - - - - 0.832 inositol polyphosphate-5-phosphatase B [Source:HGNC Symbol;Acc:HGNC:6077]
97. ENSGALG00000002852 ENSGALG00000002852 2687 0.832 - - - - - - 0.832 - - -
98. PTN ENSGALG00000040493 864 0.832 - - - - - - 0.832 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
99. MBNL1 ENSGALG00000029190 3953 0.832 - - - - - - 0.832 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
100. FEN1 ENSGALG00000033781 16551 0.832 - - - - - - 0.832 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]

There are 479 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA