Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PER3

Gene Name Gene ID Reads Annotation
PER3 ENSGALG00000000573 590 period circadian clock 3 [Source:NCBI gene;Acc:419366]











Genes with expression patterns similar to PER3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PER3 ENSGALG00000000573 590 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 period circadian clock 3 [Source:NCBI gene;Acc:419366]
2. TP53I3 ENSGALG00000016502 178 0.863 - - - - - - - 0.863 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
3. PAK2 ENSGALG00000006426 283 0.848 - - - - - - - 0.848 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
4. ZIC3 ENSGALG00000031144 863 0.84 - - - - - - - 0.840 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
5. ZNFX1 ENSGALG00000004859 33 0.825 - - - - - - - 0.825 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
6. IRG1 IRG1 21 0.82 - - - - - - - 0.820 - -
7. PPM1F ENSGALG00000039121 26 0.82 - - - - - - - 0.820 - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
8. AQP12 AQP12 11 0.818 - - - - - - - 0.818 - -
9. SLC6A17 ENSGALG00000000394 10 0.813 - - - - 0.813 - - - - - solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
10. HTT ENSGALG00000015635 226 0.813 - - - - - - - 0.813 - - huntingtin [Source:HGNC Symbol;Acc:HGNC:4851]
11. CD4 ENSGALG00000014477 19 0.813 - - - - - - - 0.813 - - CD4 molecule [Source:NCBI gene;Acc:395362]
12. INA ENSGALG00000028238 208 0.812 - - - - - - - 0.812 - - internexin neuronal intermediate filament protein alpha
13. ANKRD44 ENSGALG00000007996 17 0.811 - - - - - - - 0.811 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
14. NXPH2 ENSGALG00000029083 353 0.809 - - - - - - - 0.809 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
15. RBL2 ENSGALG00000003663 10 0.807 - - - - 0.807 - - - - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
16. RAP1GDS1L ENSGALG00000002395 5 0.807 - - - - 0.807 - - - - - rap1 GTPase-GDP dissociation stimulator 1-like
17. PTPN14 ENSGALG00000009784 18 0.807 - - - - 0.807 - - - - - protein tyrosine phosphatase, non-receptor type 14 [Source:HGNC Symbol;Acc:HGNC:9647]
18. GFAP ENSGALG00000000909 21 0.807 - - - - - - - 0.807 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
19. PRSS56 ENSGALG00000045413 17 0.807 - - - - 0.807 - - - - - serine protease 56 [Source:HGNC Symbol;Acc:HGNC:39433]
20. KCTD3 ENSGALG00000009678 335 0.806 - - - - 0.806 - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
21. ABCA8 ENSGALG00000021399 11 0.806 - - - - - - - 0.806 - - ATP binding cassette subfamily A member 8
22. GAL ENSGALG00000007047 606 0.806 - - - - - - - - - 0.806 galanin and GMAP prepropeptide [Source:NCBI gene;Acc:423117]
23. USP53 ENSGALG00000011990 12 0.805 - - - - - - - 0.805 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
24. KRT20 ENSGALG00000019716 11 0.805 - - - - - - - 0.805 - - keratin 20 [Source:NCBI gene;Acc:420045]
25. SDR42E2 ENSGALG00000006964 57 0.805 - - - - - - - 0.805 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
26. PACRG ENSGALG00000011560 67 0.803 - - - - 0.803 - - - - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
27. PLB1 PLB1 101 0.803 - - - - - - - 0.803 - -
28. FOXP4 ENSGALG00000033497 13 0.803 - - - - - - - 0.803 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
29. DNAI2 ENSGALG00000004495 45 0.803 - - - - - - - 0.803 - - dynein axonemal intermediate chain 2
30. ENSGALG00000019053 ENSGALG00000019053 8 0.803 - - - - - - - 0.803 - -
31. STAB1 21 0.803 - - - - - - - 0.803 - - stabilin 1, transcript variant X2
32. CCDC96 9 0.803 - - - - - - - 0.803 - - coiled-coil domain containing 96
33. GINS3 ENSGALG00000031209 32 0.803 - - - - - - - 0.803 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
34. APOAIV APOAIV 5 0.803 - - - - - - - 0.803 - -
35. C14H16ORF42 C14H16ORF42 263 0.802 - - - - - - - 0.802 - -
36. TMCO4 ENSGALG00000004081 31 0.801 - - - - - - - 0.801 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
37. DOK2 8 0.801 - - - - 0.801 - - - - - docking protein 2, transcript variant X2
38. NRG2 ENSGALG00000033641 61 0.799 - - - - 0.799 - - - - - neuregulin 2 [Source:HGNC Symbol;Acc:HGNC:7998]
39. MAPT ENSGALG00000000625 659 0.799 - - - - - - - 0.799 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
40. ICOS ENSGALG00000008656 27 0.798 - - - - - - - 0.798 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
41. PRSS35 ENSGALG00000015847 52 0.792 - - - - - - - 0.792 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
42. RAB11FIP4 ENSGALG00000003227 62 0.791 - - - - - - - 0.791 - - RAB11 family interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30267]
43. FURIN ENSGALG00000008341 2609 0.791 - - - - - - - 0.791 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
44. ZFP64 ENSGALG00000038858 177 0.79 - - 0.790 - - - - - - - ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]
45. PTPRD ENSGALG00000015058 37 0.79 - - - - - - - 0.790 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
46. HAVCR1 ENSGALG00000017362 25 0.79 - - - - - - - 0.790 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
47. KLRD1 ENSGALG00000014722 27 0.788 - - - - - - - 0.788 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
48. KIAA0513 ENSGALG00000025938 46 0.787 - - - - - - - 0.787 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
49. LOC417973 ENSGALG00000019325 9 0.786 - - - - - - - 0.786 - - uncharacterized LOC417973, transcript variant X1
50. NRIP3 ENSGALG00000005903 58 0.785 - - - - - - - 0.785 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
51. RIPK4 ENSGALG00000040189 102 0.783 - - - - - - - 0.783 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
52. VWCE ENSGALG00000043089 212 0.781 - - - - - - - 0.781 - - von Willebrand factor C and EGF domains [Source:HGNC Symbol;Acc:HGNC:26487]
53. ENSGALG00000019522 ENSGALG00000019522 122 0.78 - - - - - - - 0.780 - -
54. CD200R1A CD200R1A 105 0.78 - - - - - - - 0.780 - -
55. EPB41L4A ENSGALG00000000234 113 0.779 - - - - - - - 0.779 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
56. C1orf116 ENSGALG00000001091 34 0.779 - - - - 0.779 - - - - - chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
57. POMT1 ENSGALG00000003757 38 0.779 - - - - 0.779 - - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
58. ENPP3 ENSGALG00000037587 25 0.778 - - - - - - - 0.778 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
59. CNTN1 ENSGALG00000009523 158 0.777 - - - - - - - 0.777 - - contactin 1 [Source:NCBI gene;Acc:417786]
60. HBS1L ENSGALG00000013962 181 0.777 - - - - 0.777 - - - - - HBS1 like translational GTPase [Source:HGNC Symbol;Acc:HGNC:4834]
61. PLEKHJ1 ENSGALG00000000835 55 0.777 - - - - 0.777 - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
62. CHGB ENSGALG00000046616 357 0.776 - - - - - - - - - 0.776 chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
63. C1QTNF6 ENSGALG00000027067 493 0.774 - - - - - - - 0.774 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
64. DZANK1 ENSGALG00000008731 120 0.772 - - - - - - - 0.772 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
65. FKBP14 ENSGALG00000011181 154 0.77 - - - - - - - 0.770 - - FK506 binding protein 14 [Source:HGNC Symbol;Acc:HGNC:18625]
66. PBX1A PBX1A 96 0.77 - - - - 0.770 - - - - -
67. PDXDC1 ENSGALG00000034829 406 0.77 - - - - 0.770 - - - - - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
68. NSDHL ENSGALG00000007493 3126 0.769 - - - - - - - 0.769 - - NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:HGNC:13398]
69. ASB13 ENSGALG00000008401 181 0.769 - - - - - - - 0.769 - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
70. DOCK5 ENSGALG00000000311 51 0.769 - - - - - - - 0.769 - - dedicator of cytokinesis 5, transcript variant X2
71. TMEM209 ENSGALG00000008036 1190 0.768 - - 0.768 - - - - - - - transmembrane protein 209 [Source:HGNC Symbol;Acc:HGNC:21898]
72. LEPREL2 LEPREL2 2046 0.768 - - - - - - - 0.768 - -
73. PDGFB ENSGALG00000012178 509 0.767 - - - - - - - 0.767 - - platelet-derived growth factor beta polypeptide [Source:NCBI gene;Acc:374128]
74. HDAC11 ENSGALG00000005092 176 0.766 - - - - - - - 0.766 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
75. JPH1 ENSGALG00000035845 148 0.766 - - - - 0.766 - - - - - junctophilin 1 [Source:HGNC Symbol;Acc:HGNC:14201]
76. VSTM4 ENSGALG00000006174 98 0.766 - - - - - - - - - 0.766 V-set and transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26470]
77. PACS2 1614 0.766 - - - - - - - 0.766 - - phosphofurin acidic cluster sorting protein 2, transcript variant X13
78. TRAF-5 TRAF-5 102 0.765 - - - - - - - 0.765 - -
79. GPR61 ENSGALG00000040168 70 0.765 - - - - - - - 0.765 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
80. SMYD1 ENSGALG00000015935 75 0.764 - - - - - - - 0.764 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
81. SGMS1 ENSGALG00000003701 2459 0.763 - - - - - - - 0.763 - - sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]
82. ABCC4 ENSGALG00000016896 154 0.762 - - - - - - - 0.762 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
83. MGP ENSGALG00000011740 978 0.762 - - - - - - - - - 0.762 matrix Gla protein [Source:NCBI gene;Acc:395912]
84. MTR ENSGALG00000014464 90 0.762 - - - - 0.762 - - - - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
85. ENSGALG00000023731 ENSGALG00000023731 149 0.76 - - - - - - - 0.760 - -
86. IRK1 IRK1 563 0.759 - - - - - - - 0.759 - -
87. NOV ENSGALG00000038364 190 0.758 - - - - - - - - - 0.758 nephroblastoma overexpressed [Source:NCBI gene;Acc:396204]
88. CTSK ENSGALG00000028147 185 0.757 - - - - 0.757 - - - - - cathepsin K [Source:NCBI gene;Acc:395818]
89. ENSGALG00000021882 ENSGALG00000021882 63 0.757 - - - - - - - 0.757 - -
90. SARM1 ENSGALG00000003595 15 0.757 - - - - 0.757 - - - - - sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]
91. KLF12 ENSGALG00000016926 197 0.757 - - - - 0.757 - - - - - Kruppel like factor 12 [Source:HGNC Symbol;Acc:HGNC:6346]
92. CCDC86 ENSGALG00000036935 5280 0.754 - - - - - - - 0.754 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
93. SLC7A2 ENSGALG00000013627 58 0.751 - - - - - - - 0.751 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
94. LCA5L ENSGALG00000016125 99 0.75 - - - - - - - 0.750 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
95. RNASET2 ENSGALG00000011426 40 0.75 - - - - - - - 0.750 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
96. SNX29 ENSGALG00000039855 676 0.746 - - - - - - - 0.746 - - sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]
97. GFRA1 ENSGALG00000009173 371 0.743 - - - - - - - 0.743 - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
98. AMHR2 ENSGALG00000012055 55 0.742 - - - - 0.742 - - - - - anti-Mullerian hormone receptor, type II, transcript variant X1
99. STXBP1 ENSGALG00000040003 157 0.741 - - - - - - - 0.741 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
100. INPP4A ENSGALG00000029709 48 0.741 - - - - - - - 0.741 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]

There are 53 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA