Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PEPD

Gene Name Gene ID Reads Annotation
PEPD ENSGALG00000004899 9785 peptidase D [Source:NCBI gene;Acc:415776]











Genes with expression patterns similar to PEPD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PEPD ENSGALG00000004899 9785 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidase D [Source:NCBI gene;Acc:415776]
2. LACTB2 ENSGALG00000038745 3460 1.756 - - - - - - 0.858 0.898 - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
3. DNA2 ENSGALG00000004037 5426 1.617 - - - - - - 0.890 0.727 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
4. KIF15 ENSGALG00000036645 9946 0.941 - - - - - - 0.941 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
5. TM9SF3 ENSGALG00000005534 15290 0.935 - - - - - - 0.935 - - - transmembrane 9 superfamily member 3
6. MRPS11 ENSGALG00000006777 16009 0.933 - - - - - - 0.933 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
7. BTAF1 ENSGALG00000030598 3556 0.932 - - - - - - 0.932 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
8. RPA1 ENSGALG00000003072 8023 0.931 - - - - - - 0.931 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
9. TRAM1 ENSGALG00000041112 22876 0.924 - - - - - - 0.924 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
10. UPF1 ENSGALG00000003220 9496 0.924 - - - - - - 0.924 - - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
11. ZMYND11 ENSGALG00000006599 5740 0.918 - - - - - - 0.918 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
12. SAP130 ENSGALG00000002070 9814 0.918 - - - - - - - 0.918 - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
13. SF3A3 ENSGALG00000001540 9664 0.916 - - - - - - 0.916 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
14. NDUFA9 ENSGALG00000017282 14358 0.916 - - - - - - 0.916 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
15. UFSP2 ENSGALG00000010601 5809 0.915 - - - - - - - 0.915 - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
16. COPE ENSGALG00000003153 19444 0.915 - - - - - - 0.915 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
17. CENPF ENSGALG00000009690 10429 0.914 - - - - - - 0.914 - - - centromere protein F [Source:NCBI gene;Acc:395357]
18. MINOS1 ENSGALG00000004039 37740 0.91 - - - - - - 0.910 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
19. XRN1 ENSGALG00000002706 4014 0.91 - - - - - - 0.910 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
20. SDF4 ENSGALG00000001872 6382 0.91 - - - - - - 0.910 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
21. FAM63A 8470 0.909 - - - - - - - 0.909 - - family with sequence similarity 63 member A, transcript variant X2
22. COX7A2L ENSGALG00000037996 13646 0.909 - - - - - - 0.909 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
23. LAP3 ENSGALG00000006334 21076 0.907 - - - - - - 0.907 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
24. EI24 ENSGALG00000038097 24081 0.907 - - - - - - 0.907 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
25. MED7 ENSGALG00000003870 4244 0.906 - - - - - - 0.906 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
26. MRE11A MRE11A 5754 0.906 - - - - - - 0.906 - - -
27. SOD2 ENSGALG00000011661 13178 0.906 - - - - - - 0.906 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
28. HUNK ENSGALG00000015879 7227 0.905 - - - - - - - 0.905 - - hormonally up-regulated Neu-associated kinase [Source:HGNC Symbol;Acc:HGNC:13326]
29. TP53BP2 ENSGALG00000042816 12368 0.904 - - - - - - 0.904 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
30. ADH5 ENSGALG00000012245 38217 0.903 - - - - - - 0.903 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
31. WBP11 ENSGALG00000011745 11182 0.901 - - - - - - 0.901 - - - WW domain binding protein 11, transcript variant X1
32. SCRN1 ENSGALG00000011176 3783 0.9 - - - - - - 0.900 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
33. GABPA ENSGALG00000015763 11567 0.9 - - - - - - 0.900 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
34. GCLM ENSGALG00000005782 15789 0.9 - - - - - - 0.900 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
35. GFM1 ENSGALG00000009634 7213 0.899 - - - - - - 0.899 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
36. CHMP7 ENSGALG00000000409 8967 0.898 - - - - - - 0.898 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
37. CTCF 10811 0.898 - - - - - - - 0.898 - - CCCTC-binding factor, transcript variant X2
38. KCTD9 ENSGALG00000000275 3455 0.896 - - - - - - 0.896 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
39. GTF2E1 ENSGALG00000042320 7712 0.895 - - - - - - 0.895 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
40. SPTBN1 ENSGALG00000029512 18579 0.895 - - - - - - 0.895 - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
41. E4F1 ENSGALG00000005900 1814 0.893 - - - - - - - 0.893 - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
42. CLTA ENSGALG00000015326 26867 0.892 - - - - - - 0.892 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
43. LARP1 ENSGALG00000040109 14808 0.892 - - - - - - 0.892 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
44. POLA1 ENSGALG00000016312 9440 0.89 - - - - - - 0.890 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
45. LATS2 4776 0.889 - - - - - - 0.889 - - - large tumor suppressor kinase 2
46. ARID4A ENSGALG00000012037 8554 0.889 - - - - - - 0.889 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
47. PPP3R1 ENSGALG00000023648 3417 0.889 - - - - - - 0.889 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
48. CLPTM1L ENSGALG00000013187 9733 0.888 - - - - - - 0.888 - - - CLPTM1 like [Source:NCBI gene;Acc:420973]
49. MRPL19 ENSGALG00000016731 22670 0.888 - - - - - - 0.888 - - - mitochondrial ribosomal protein L19, transcript variant X1
50. DYNC1LI1 ENSGALG00000011491 11011 0.887 - - - - - - 0.887 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
51. TEAD4 ENSGALG00000014342 6123 0.887 - - - - - - - 0.887 - - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
52. MAP1LC3A ENSGALG00000038721 2230 0.886 - - - - - - 0.886 - - - microtubule associated protein 1 light chain 3 alpha
53. NCOA4 ENSGALG00000002066 10544 0.886 - - - - - - 0.886 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
54. DNAJC15 ENSGALG00000016965 9163 0.886 - - - - - - 0.886 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
55. YBX1 ENSGALG00000004848 20992 0.885 - - - - - - 0.885 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
56. POR ENSGALG00000002053 5223 0.885 - - - - - - 0.885 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
57. CCND1 ENSGALG00000007555 6715 0.883 - - - - - - 0.883 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
58. UBA3 ENSGALG00000013410 6923 0.883 - - - - - - 0.883 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
59. AGR2 ENSGALG00000010825 1220 0.883 - - - - - - - 0.883 - - anterior gradient 2, protein disulphide isomerase family member [Source:HGNC Symbol;Acc:HGNC:328]
60. P4HA1 ENSGALG00000004325 4703 0.882 - - - - - - - 0.882 - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
61. FASTKD2 ENSGALG00000008529 7439 0.881 - - - - - - 0.881 - - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
62. BPTF ENSGALG00000038222 7521 0.881 - - - - - - 0.881 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
63. RBM12B ENSGALG00000035129 4314 0.881 - - - - - - 0.881 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
64. TCP1 ENSGALG00000011637 73216 0.88 - - - - - - 0.880 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
65. POLR3E ENSGALG00000007008 4010 0.88 - - - - - - 0.880 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
66. ARPC4 ENSGALG00000006691 33311 0.879 - - - - - - 0.879 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
67. RILPL2 ENSGALG00000003321 5632 0.879 - - - - - - 0.879 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
68. ARHGAP29 ENSGALG00000005683 3622 0.878 - - - - - - 0.878 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
69. OGFOD1 6926 0.878 - - - - - - 0.878 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
70. SEMA4B ENSGALG00000008297 11202 0.878 - - - - - - 0.878 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
71. TBCCD1 ENSGALG00000006566 2696 0.878 - - - - - - 0.878 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
72. CREPT CREPT 17142 0.877 - - - - - - 0.877 - - -
73. MYST2 MYST2 8078 0.877 - - - - - - 0.877 - - -
74. NCAM1 ENSGALG00000007839 19929 0.876 - - - - - - 0.876 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
75. ENSGALG00000027854 ENSGALG00000027854 5007 0.875 - - - - - - 0.875 - - -
76. PRCP ENSGALG00000037521 4012 0.875 - - - - - - 0.875 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
77. SLC25A14 ENSGALG00000004063 5574 0.875 - - - - - - 0.875 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
78. PPM1E ENSGALG00000005061 2606 0.875 - - - - - - - 0.875 - - protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
79. MRPL44 ENSGALG00000003067 15256 0.874 - - - - - - 0.874 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
80. BLOC1S5 ENSGALG00000012782 5885 0.872 - - - - - - - 0.872 - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
81. E2F6 ENSGALG00000016454 4747 0.872 - - - - - - 0.872 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
82. GPX1 ENSGALG00000028204 62935 0.871 - - - - - - 0.871 - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
83. METTL11A METTL11A 11876 0.871 - - - - - - 0.871 - - -
84. EIF4G3 ENSGALG00000010084 5881 0.871 - - - - - - 0.871 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
85. gga-mir-6643 ENSGALG00000027935 4442 0.871 - - - - - - 0.871 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
86. UHMK1 ENSGALG00000002734 2308 0.87 - - - - - - - 0.870 - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
87. SFT2D1 ENSGALG00000020005 10855 0.869 - - - - - - 0.869 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
88. KIF20A ENSGALG00000035030 10249 0.869 - - - - - - 0.869 - - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
89. TMEM108 ENSGALG00000036412 2903 0.869 - - - - - - 0.869 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
90. CLCN3 ENSGALG00000009674 3704 0.869 - - - - - - 0.869 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
91. AP2B1 ENSGALG00000042125 13229 0.868 - - - - - - 0.868 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
92. ENSGALG00000007509 ENSGALG00000007509 18441 0.867 - - - - - - 0.867 - - -
93. UBR7 ENSGALG00000010842 16488 0.867 - - - - - - 0.867 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
94. HDGFL3 ENSGALG00000006036 13576 0.867 - - - - - - 0.867 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
95. PSMA6 ENSGALG00000010060 26517 0.866 - - - - - - 0.866 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
96. ATN1 ENSGALG00000014554 3270 0.866 - - - - - - 0.866 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
97. SHQ1 ENSGALG00000007798 1982 0.866 - - - - - - 0.866 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
98. ATE1 ENSGALG00000009502 3751 0.866 - - - - - - 0.866 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
99. SIRT1 ENSGALG00000002761 9028 0.866 - - - - - - 0.866 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
100. TK2 ENSGALG00000034216 5394 0.865 - - - - - - - 0.865 - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]

There are 225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA