Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PEF1

Gene Name Gene ID Reads Annotation
PEF1 ENSGALG00000040519 8522 penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]











Genes with expression patterns similar to PEF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PEF1 ENSGALG00000040519 8522 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
2. CNI CNI 18453 1.478 - - - - - 0.724 0.754 - - -
3. FUNDC1 ENSGALG00000028187 10511 0.896 - - - - - - - 0.896 - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
4. VBP1 VBP1 14482 0.877 - - - - - - 0.877 - - -
5. NEK6 ENSGALG00000001118 20333 0.876 - - - - - - 0.876 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
6. DPYSL2 ENSGALG00000000227 9668 0.869 - - - - - - 0.869 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
7. PSMB2 ENSGALG00000026421 51885 0.864 - - - - - - 0.864 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
8. MAP3K7 ENSGALG00000015596 15164 0.86 - - - - - - 0.860 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
9. ADI1 ENSGALG00000025796 8636 0.858 - - - - - - 0.858 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
10. CTCF 10811 0.858 - - - - - - 0.858 - - - CCCTC-binding factor, transcript variant X2
11. TM4SF18 4553 0.853 - - - - - - 0.853 - - - transmembrane 4 L six family member 18, transcript variant X2
12. NUP50 ENSGALG00000014222 11743 0.853 - - - - - - 0.853 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
13. ILF2 ENSGALG00000011570 23050 0.852 - - - - - - 0.852 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
14. CHRAC1 ENSGALG00000040823 5695 0.849 - - - - - - 0.849 - - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
15. AKAP1 ENSGALG00000005575 12051 0.848 - - - - - - 0.848 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
16. NDUFA12 ENSGALG00000011325 19807 0.847 - - - - - - 0.847 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
17. EIF2B1 ENSGALG00000003259 9491 0.847 - - - - - - 0.847 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
18. UBE2D1 ENSGALG00000021213 5876 0.845 - - - - - - 0.845 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
19. RARS ENSGALG00000001850 23283 0.845 - - - - - - 0.845 - - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
20. RANBP1 ENSGALG00000002107 17715 0.842 - - - - - - 0.842 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
21. SKAP2 ENSGALG00000030081 13746 0.842 - - - - - - 0.842 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
22. NOC4L ENSGALG00000002272 9644 0.841 - - - - - - 0.841 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
23. YEATS2 ENSGALG00000036356 3194 0.841 - - - - - - 0.841 - - - YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]
24. HERC2 ENSGALG00000016739 9900 0.839 - - - - - - 0.839 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
25. MED17 ENSGALG00000017218 5821 0.839 - - - - - - 0.839 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
26. GNAI2 ENSGALG00000035645 9535 0.838 - - - - - - 0.838 - - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
27. WDR43 ENSGALG00000032529 12235 0.837 - - - - - - 0.837 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
28. PSMC3 ENSGALG00000008108 22922 0.837 - - - - - - 0.837 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
29. TXNDC17 ENSGALG00000027950 45004 0.837 - - - - - - 0.837 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
30. RPF2 ENSGALG00000037087 12788 0.836 - - - - - - 0.836 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
31. TPRKB ENSGALG00000013018 8687 0.836 - - - - - - 0.836 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
32. PRELID1 ENSGALG00000002990 55592 0.835 - - - - - - 0.835 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
33. RBBP4 ENSGALG00000003522 72455 0.834 - - - - - - 0.834 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
34. EIF4A2 ENSGALG00000008684 58507 0.834 - - - - - - 0.834 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
35. RUVBL1 ENSGALG00000005931 9379 0.834 - - - - - - 0.834 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
36. DDX19B ENSGALG00000039967 49600 0.831 - - - - - - 0.831 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
37. CDC45 ENSGALG00000001616 8432 0.83 - - - - - - 0.830 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
38. SAR1B ENSGALG00000038753 6493 0.83 - - - - - - 0.830 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
39. YWHAZ ENSGALG00000031387 84985 0.83 - - - - - - 0.830 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
40. PPP1R2 ENSGALG00000029789 11594 0.829 - - - - - - 0.829 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
41. CRLS1 ENSGALG00000009214 8652 0.828 - - - - - - 0.828 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
42. AGFG1 ENSGALG00000003052 4766 0.828 - - - - - - 0.828 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
43. TTC3 ENSGALG00000016050 4115 0.828 - - - - - - 0.828 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
44. ZNHIT3 ENSGALG00000026031 8652 0.827 - - - - - - 0.827 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
45. UTP11L UTP11L 11927 0.826 - - - - - - 0.826 - - -
46. RNPS1 ENSGALG00000009288 13588 0.826 - - - - - - 0.826 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
47. MRPS30 ENSGALG00000014874 3416 0.826 - - - - - - 0.826 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
48. SF3B3 ENSGALG00000002531 19397 0.825 - - - - - - 0.825 - - - splicing factor 3b subunit 3, transcript variant X2
49. CEP78 ENSGALG00000015179 5227 0.825 - - - - - - 0.825 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
50. SNRNP40 ENSGALG00000000615 32298 0.825 - - - - - - 0.825 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
51. HSPA4 ENSGALG00000040882 20966 0.825 - - - - - - 0.825 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
52. NDUFV2 ENSGALG00000036625 29234 0.825 - - - - - - 0.825 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
53. INCENP ENSGALG00000007537 16617 0.825 - - - - - - 0.825 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
54. FAM177A1 ENSGALG00000010046 4318 0.823 - - - - - - 0.823 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
55. MCTS1 ENSGALG00000008517 27514 0.823 - - - - - - 0.823 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
56. RFC5 ENSGALG00000026517 26113 0.823 - - - - - - 0.823 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
57. CHN1 ENSGALG00000009293 6415 0.823 - - - - - - 0.823 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
58. SRBD1 ENSGALG00000009990 4568 0.823 - - - - - - 0.823 - - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
59. GLRX3 ENSGALG00000010464 22578 0.823 - - - - - - 0.823 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
60. CASK ENSGALG00000042400 8485 0.823 - - - - - - 0.823 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
61. LSM5 ENSGALG00000041625 22307 0.823 - - - - - - 0.823 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
62. METAP2 ENSGALG00000011377 16311 0.822 - - - - - - 0.822 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
63. NUP54 ENSGALG00000011506 4945 0.821 - - - - - - 0.821 - - - nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
64. EVL ENSGALG00000011209 5440 0.821 - - - - - - 0.821 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
65. CZH9ORF80 CZH9ORF80 12760 0.821 - - - - - - 0.821 - - -
66. ACTR2 ENSGALG00000008779 17812 0.82 - - - - - - 0.820 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
67. RIOK3 ENSGALG00000015004 4249 0.82 - - - - - - 0.820 - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
68. SPCS1 ENSGALG00000001655 7718 0.818 - - - - - - 0.818 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
69. BSG ENSGALG00000001328 37947 0.818 - - - - - - 0.818 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
70. AHCTF1 ENSGALG00000010630 4809 0.816 - - - - - - 0.816 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
71. EHD3 ENSGALG00000009086 14407 0.816 - - - - - - 0.816 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
72. IREB2 ENSGALG00000035462 10659 0.815 - - - - - - 0.815 - - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
73. METTL6 ENSGALG00000040665 4467 0.815 - - - - - - 0.815 - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
74. SSR3 ENSGALG00000028683 24334 0.815 - - - - - - 0.815 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
75. FKBP12 FKBP12 64317 0.813 - - - - - - 0.813 - - -
76. TMEM70 ENSGALG00000033568 10720 0.812 - - - - - - 0.812 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
77. CUL2 ENSGALG00000007095 9493 0.812 - - - - - - 0.812 - - - cullin 2 [Source:NCBI gene;Acc:420467]
78. NUPL1 NUPL1 8197 0.812 - - - - - - 0.812 - - -
79. BRMS1L ENSGALG00000010093 4964 0.811 - - - - - - 0.811 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
80. NDUFAB1 ENSGALG00000006073 40467 0.811 - - - - - - 0.811 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
81. ACTN1 ENSGALG00000042458 10477 0.811 - - - - - - 0.811 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
82. LIMD2 ENSGALG00000000529 30617 0.81 - - - - - - 0.810 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
83. PRKRIP1 ENSGALG00000001833 5092 0.81 - - - - - - 0.810 - - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
84. C1QBP ENSGALG00000001654 34814 0.81 - - - - - - 0.810 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
85. APIP ENSGALG00000031286 6838 0.809 - - - - - - 0.809 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
86. MRPL50 ENSGALG00000015543 11649 0.809 - - - - - - 0.809 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
87. TRAPPC2 ENSGALG00000016578 8749 0.809 - - - - - - 0.809 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
88. ITGB1 ENSGALG00000007145 19551 0.808 - - - - - - 0.808 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
89. PIK3IP1 ENSGALG00000006942 8388 0.808 - - - - - - 0.808 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
90. AN1ZNF5L ENSGALG00000014589 21148 0.808 - - - - - - 0.808 - - - AN1-type zinc finger protein 5-like, transcript variant X2
91. KLHDC4 ENSGALG00000037315 9828 0.808 - - - - - - 0.808 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
92. FCF1 ENSGALG00000010275 24928 0.808 - - - - - - 0.808 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
93. KIAA0355 ENSGALG00000004949 4352 0.808 - - - - - - - 0.808 - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
94. PLRG1 ENSGALG00000009257 8613 0.807 - - - - - - 0.807 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
95. SHISA5 ENSGALG00000004661 8573 0.807 - - - - - - 0.807 - - - shisa family member 5 [Source:NCBI gene;Acc:415948]
96. CCDC59 ENSGALG00000028648 9272 0.807 - - - - - - 0.807 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
97. ZMPSTE24 ENSGALG00000000855 5144 0.806 - - - - - - 0.806 - - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
98. FAM18B1 ENSGALG00000001335 5177 0.805 - - - - - - 0.805 - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
99. L3MBTL2 ENSGALG00000011976 3941 0.805 - - - - - - 0.805 - - - L3MBTL2, polycomb repressive complex 1 subunit [Source:NCBI gene;Acc:417999]
100. MRPL55 5995 0.805 - - - - - - 0.805 - - - mitochondrial ribosomal protein L55

There are 550 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA