Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDZRN3

Gene Name Gene ID Reads Annotation
PDZRN3 ENSGALG00000007819 4139 PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]











Genes with expression patterns similar to PDZRN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDZRN3 ENSGALG00000007819 4139 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
2. LRRFIP2 ENSGALG00000033102 8250 1.713 - - - - - - 0.793 0.920 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
3. SCCPDH ENSGALG00000010641 8624 1.712 - - - - - - 0.788 0.924 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
4. AP2A2 ENSGALG00000006799 13874 1.699 - - - - - - 0.781 0.918 - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
5. AEN ENSGALG00000044204 2633 1.688 - - - - - - 0.763 0.925 - - apoptosis enhancing nuclease, transcript variant X1
6. LTN1 ENSGALG00000015804 3784 1.684 - - - - - - 0.761 0.923 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
7. C6ORF162 C6ORF162 4217 1.684 - - - - - - 0.743 0.941 - -
8. CEP78 ENSGALG00000015179 5227 1.646 - - - - - - 0.712 0.934 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
9. PLRG1 ENSGALG00000009257 8613 1.64 - - - - - - 0.729 0.911 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
10. CZH9ORF80 CZH9ORF80 12760 1.621 - - - - - - 0.748 0.873 - -
11. UBE2G2 ENSGALG00000005667 12689 1.559 - - - - - - 0.715 0.844 - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
12. KIAA0355 ENSGALG00000004949 4352 1.513 - - - - - - 0.780 0.733 - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
13. KLHDC4 ENSGALG00000037315 9828 1.51 - - - - - - 0.716 0.794 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
14. GPC4 ENSGALG00000006080 56498 1.497 - - - - - - 0.785 0.712 - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
15. HIBADH ENSGALG00000033207 3540 0.959 - - - - - - - 0.959 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
16. SPATS2L ENSGALG00000008152 3037 0.958 - - - - - - - 0.958 - - spermatogenesis associated serine rich 2 like [Source:NCBI gene;Acc:424067]
17. NAP1L4 ENSGALG00000006446 10868 0.955 - - - - - - - 0.955 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
18. THAP5 ENSGALG00000009494 6540 0.953 - - - - - - - 0.953 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
19. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.95 - - - - - - - 0.950 - -
20. gga-mir-6683 ENSGALG00000026767 5682 0.95 - - - - - - - 0.950 - - gga-mir-6683 [Source:miRBase;Acc:MI0022504]
21. TDRD3 ENSGALG00000016936 3412 0.949 - - - - - - - 0.949 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
22. SKIV2L2 ENSGALG00000014709 2926 0.944 - - - - - - - 0.944 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
23. PAXIP1 ENSGALG00000036064 3120 0.941 - - - - - - - 0.941 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
24. AHR ENSGALG00000010836 2276 0.94 - - - - - - - 0.940 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
25. SGPL1 ENSGALG00000004553 4520 0.94 - - - - - - - 0.940 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
26. GID8 ENSGALG00000005700 3992 0.94 - - - - - - - 0.940 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
27. CTNNBIP1 ENSGALG00000026306 8049 0.94 - - - - - - - 0.940 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
28. SYAP1 ENSGALG00000016548 3347 0.938 - - - - - - - 0.938 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
29. SNX3 ENSGALG00000015304 1631 0.938 - - - - - - - 0.938 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
30. ARHGAP32 ENSGALG00000043511 7916 0.938 - - - - - - - 0.938 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
31. DHX38 ENSGALG00000000787 6913 0.937 - - - - - - - 0.937 - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
32. HSDL2 ENSGALG00000015663 8966 0.937 - - - - - - - 0.937 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
33. CUL4B ENSGALG00000008559 16864 0.937 - - - - - - - 0.937 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
34. RIPK1 ENSGALG00000012827 3405 0.936 - - - - - - - 0.936 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
35. UBXN2B ENSGALG00000030585 2177 0.934 - - - - - - - 0.934 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
36. SEC24B ENSGALG00000035482 3430 0.932 - - - - - - - 0.932 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
37. SFSWAP ENSGALG00000002487 9977 0.932 - - - - - - - 0.932 - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
38. TAF7 4725 0.932 - - - - - - - 0.932 - - TATA-box binding protein associated factor 7, transcript variant X1
39. ATRIP ENSGALG00000004670 3647 0.931 - - - - - - - 0.931 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
40. TMEM144 ENSGALG00000026253 1744 0.931 - - - - - - - 0.931 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
41. C11H19ORF12 C11H19ORF12 5149 0.93 - - - - - - - 0.930 - -
42. B4GALT3 ENSGALG00000022891 2825 0.93 - - - - - - - 0.930 - - beta-1,4-galactosyltransferase 3
43. SPRYD7 ENSGALG00000017010 1910 0.93 - - - - - - - 0.930 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
44. NOL6 ENSGALG00000030730 7191 0.929 - - - - - - - 0.929 - - nucleolar protein 6
45. AK1 ENSGALG00000029150 5935 0.929 - - - - - - - 0.929 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
46. MEIS1 ENSGALG00000041626 3865 0.928 - - - - - - - 0.928 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
47. PRPSAP2 ENSGALG00000005064 5549 0.928 - - - - - - - 0.928 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
48. SH3GLB1 ENSGALG00000006284 12764 0.928 - - - - - - - 0.928 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
49. ARL1 ENSGALG00000011651 3230 0.927 - - - - - - - 0.927 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
50. SMAD1 ENSGALG00000009977 3540 0.926 - - - - - - - 0.926 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
51. YOD1 ENSGALG00000037597 2989 0.926 - - - - - - - 0.926 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
52. SMPD4 ENSGALG00000006455 2270 0.924 - - - - - - - 0.924 - - sphingomyelin phosphodiesterase 4, transcript variant X1
53. C2CD5 ENSGALG00000013210 3060 0.924 - - - - - - - 0.924 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
54. PALD1 ENSGALG00000004465 3553 0.924 - - - - - - - 0.924 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
55. HEATR6 ENSGALG00000005516 3347 0.923 - - - - - - - 0.923 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
56. BLZF1 ENSGALG00000015225 3594 0.923 - - - - - - - 0.923 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
57. ARNT ENSGALG00000000751 3495 0.923 - - - - - - - 0.923 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
58. RERG ENSGALG00000028186 1124 0.922 - - - - - - - 0.922 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
59. KLHL13 KLHL13 2712 0.92 - - - - - - - 0.920 - -
60. MLX ENSGALG00000003199 5286 0.92 - - - - - - - 0.920 - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
61. CDK14 ENSGALG00000009062 995 0.92 - - - - - - - 0.920 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
62. NUP153 ENSGALG00000012720 8079 0.919 - - - - - - - 0.919 - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
63. THYN1 ENSGALG00000001529 9423 0.918 - - - - - - - 0.918 - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
64. SMU1 ENSGALG00000002014 8136 0.918 - - - - - - - 0.918 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
65. C1orf123 ENSGALG00000026516 3227 0.918 - - - - - - - 0.918 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
66. NPB NPB 8056 0.918 - - - - - - - 0.918 - -
67. gga-mir-1723 ENSGALG00000025386 6662 0.917 - - - - - - - 0.917 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
68. C4H4ORF41 C4H4ORF41 1520 0.916 - - - - - - - 0.916 - -
69. DNTTIP1 ENSGALG00000003575 4687 0.916 - - - - - - - 0.916 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
70. GATAD2A ENSGALG00000042900 6337 0.916 - - - - - - - 0.916 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
71. UBE2V1 ENSGALG00000008015 17947 0.916 - - - - - - - 0.916 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
72. SRFBP1 ENSGALG00000005316 6826 0.915 - - - - - - - 0.915 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
73. ILKAP ENSGALG00000006253 7388 0.915 - - - - - - - 0.915 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
74. SMAD2W ENSGALG00000014184 1773 0.914 - - - - - - - 0.914 - - SMAD family member 2-W, transcript variant X3
75. RNF166 ENSGALG00000007272 7154 0.913 - - - - - - - 0.913 - - ring finger protein 166 [Source:NCBI gene;Acc:425360]
76. ZBTB16 ENSGALG00000038540 5544 0.913 - - - - - - - 0.913 - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
77. CACTIN ENSGALG00000024391 1408 0.912 - - - - - - - 0.912 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
78. THBS4 ENSGALG00000014804 4228 0.912 - - - - - - - 0.912 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
79. ARRDC2 ENSGALG00000003527 1797 0.91 - - - - - - - 0.910 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
80. LDLRAP1 ENSGALG00000001051 1657 0.91 - - - - - - - 0.910 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
81. ARID1B ENSGALG00000013683 3397 0.909 - - - - - - - 0.909 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
82. ETAA1 ENSGALG00000027922 1684 0.909 - - - - - - - 0.909 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
83. RAD50 ENSGALG00000006794 4308 0.909 - - - - - - - 0.909 - - RAD50 double strand break repair protein, transcript variant X4
84. ZUFSP 549 0.908 - - - - - - - 0.908 - - zinc finger with UFM1 specific peptidase domain
85. ARHGEF12 ENSGALG00000006663 1369 0.908 - - - - - - - 0.908 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
86. ENSGALG00000007355 ENSGALG00000007355 2149 0.907 - - - - - - - 0.907 - -
87. MMP16 ENSGALG00000032031 827 0.907 - - - - - - - 0.907 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
88. TMEM237 ENSGALG00000008381 1317 0.907 - - - - - - - 0.907 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
89. FAAH ENSGALG00000010433 3309 0.907 - - - - - - - 0.907 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
90. CDXB CDXB 143 0.907 - - - - - - - 0.907 - -
91. PLEKHA3 ENSGALG00000009135 1700 0.905 - - - - - - - 0.905 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
92. LAMA4 ENSGALG00000015001 993 0.905 - - - - - - - 0.905 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
93. PRMT3 ENSGALG00000003958 14160 0.903 - - - - - - - 0.903 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
94. TMEM245 ENSGALG00000013138 501 0.902 - - - - - - - 0.902 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
95. GAS6 ENSGALG00000016820 481 0.901 - - - - - - - 0.901 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
96. LEMD2 ENSGALG00000002870 2803 0.901 - - - - - - - 0.901 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
97. LIN28A ENSGALG00000036022 542 0.9 - - - - - - - 0.900 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
98. TMEM47 ENSGALG00000027198 3619 0.9 - - - - - - - 0.900 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
99. THUMPD3 ENSGALG00000008394 17711 0.9 - - - - - - - 0.900 - - THUMP domain containing 3, transcript variant X2
100. MYO3A ENSGALG00000007647 643 0.9 - - - - - - - 0.900 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]

There are 299 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA