Multi-species embryo Tomo-Seq

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Results for PDX1

Gene Name	Gene ID	Reads	Annotation
PDX1	ENSGALG00000038454	1	pancreatic and duodenal homeobox 1

Genes with expression patterns similar to PDX1

Nr.	Gene Name	Gene ID	Reads	Σ scores	E3 embryo	E3 aorta	E3 anterior slice 1	E3 anterior slice 2	E3 anterior slice 3	E3 posterior slice 1	E3 posterior slice 2	E3 posterior slice 3	E4 anterior slice 1	E4 posterior slice 1	Annotation
1.	PDX1	ENSGALG00000038454	1	2	-	-	1.000	1.000	-	-	-	-	-	-	pancreatic and duodenal homeobox 1
2.	TPH1	ENSGALG00000006236	21	1	-	-	1.000	-	-	-	-	-	-	-	tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
3.	PPM1H	ENSGALG00000009805	3	1	-	-	1.000	-	-	-	-	-	-	-	protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
4.	NOX3	ENSGALG00000013659	4	1	-	-	1.000	-	-	-	-	-	-	-	NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
5.	B-BTN2	B-BTN2	1	1	-	-	-	1.000	-	-	-	-	-	-
6.	C15orf60	C15orf60	16	1	-	-	-	1.000	-	-	-	-	-	-
7.	AIFM3	ENSGALG00000007720	28	1	-	-	-	1.000	-	-	-	-	-	-	apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
8.	LNX1	ENSGALG00000013940	2	1	-	-	1.000	-	-	-	-	-	-	-	ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
9.	ENSGALG00000023581	ENSGALG00000023581	0	1	-	-	1.000	-	-	-	-	-	-	-
10.	GABRA4	ENSGALG00000014202	1	1	-	-	-	1.000	-	-	-	-	-	-	gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
11.	SLC26A2	ENSGALG00000001239	3	1	-	-	1.000	-	-	-	-	-	-	-	solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
12.	RPA3-AS1	RPA3-AS1	2	1	-	-	1.000	-	-	-	-	-	-	-
13.	CSF3	ENSGALG00000030907	11	1	-	-	1.000	-	-	-	-	-	-	-	colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
14.	NKX6-3	ENSGALG00000018503	1	1	-	-	1.000	-	-	-	-	-	-	-	NK6 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:26328]
15.	GP5	ENSGALG00000045125	3	1	-	-	1.000	-	-	-	-	-	-	-	glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
16.	TSNARE1	ENSGALG00000037014	2	1	-	-	1.000	-	-	-	-	-	-	-	t-SNARE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26437]
17.	DNER	ENSGALG00000002958	3	1	-	-	1.000	-	-	-	-	-	-	-	delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
18.	ENSGALG00000027945	ENSGALG00000027945	2	1	-	-	-	1.000	-	-	-	-	-	-
19.	HOXD10	ENSGALG00000009270	66	1	-	-	1.000	-	-	-	-	-	-	-	homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
20.	SMIM15	ENSGALG00000023443	4	1	-	-	1.000	-	-	-	-	-	-	-	small integral membrane protein 15 [Source:NCBI gene;Acc:770642]
21.	NEUROD1	ENSGALG00000008908	3	1	-	-	1.000	-	-	-	-	-	-	-	neuronal differentiation 1 [Source:NCBI gene;Acc:395754]
22.	TMEM56	ENSGALG00000005580	10	1	-	-	-	1.000	-	-	-	-	-	-	transmembrane protein 56 [Source:NCBI gene;Acc:424483]
23.	ENSGALG00000028667	ENSGALG00000028667	1	1	-	-	-	1.000	-	-	-	-	-	-
24.	ANXA13	ENSGALG00000036418	5	1	-	-	1.000	-	-	-	-	-	-	-	annexin A13 [Source:NCBI gene;Acc:420342]
25.	C6orf58	ENSGALG00000045522	2	1	-	-	-	1.000	-	-	-	-	-	-	chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
26.	PLEKHN1	ENSGALG00000002121	0	1	-	-	1.000	-	-	-	-	-	-	-	pleckstrin homology domain containing N1 [Source:HGNC Symbol;Acc:HGNC:25284]
27.	BRS3.5	BRS3.5	0	1	-	-	1.000	-	-	-	-	-	-	-
28.	C14orf159	C14orf159	7	1	-	-	-	1.000	-	-	-	-	-	-
29.	P2RY4	ENSGALG00000004346	11	1	-	-	-	1.000	-	-	-	-	-	-	pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
30.	gga-mir-18b	ENSGALG00000018324	0	1	-	-	1.000	-	-	-	-	-	-	-	gga-mir-18b [Source:miRBase;Acc:MI0001209]
31.	SNORD12	SNORD12	1	1	-	-	1.000	-	-	-	-	-	-	-
32.	CASZ1	ENSGALG00000002888	2	1	-	-	1.000	-	-	-	-	-	-	-	castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
33.	TPP1		52	1	-	-	-	1.000	-	-	-	-	-	-	tripeptidyl peptidase 1
34.	ENSGALG00000006114	ENSGALG00000006114	1	1	-	-	1.000	-	-	-	-	-	-	-
35.	CLPS	ENSGALG00000034934	2	1	-	-	1.000	-	-	-	-	-	-	-	colipase [Source:NCBI gene;Acc:771102]
36.	BPIFB7	BPIFB7	22	1	-	-	1.000	-	-	-	-	-	-	-
37.	gga-mir-130b	ENSGALG00000030434	125	1	-	-	1.000	-	-	-	-	-	-	-	gga-mir-130b [Source:miRBase;Acc:MI0001239]
38.	ENSGALG00000027164	ENSGALG00000027164	8	1	-	-	-	1.000	-	-	-	-	-	-
39.	APOAIV	APOAIV	5	1	-	-	1.000	-	-	-	-	-	-	-
40.	CHB1	CHB1	0	1	-	-	1.000	-	-	-	-	-	-	-
41.	LINS	LINS	18	1	-	-	1.000	-	-	-	-	-	-	-
42.	KLHL8	ENSGALG00000011017	3	1	-	-	1.000	-	-	-	-	-	-	-	kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
43.	ATRN	ENSGALG00000016034	16	0.918	-	-	0.918	-	-	-	-	-	-	-	attractin [Source:HGNC Symbol;Acc:HGNC:885]
44.	CRYBA2	ENSGALG00000011354	14	0.905	-	-	-	0.905	-	-	-	-	-	-	crystallin beta A2 [Source:NCBI gene;Acc:373999]
45.	CHRM2	ENSGALG00000012894	21	0.849	-	-	-	0.849	-	-	-	-	-	-	cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
46.	LITAF	ENSGALG00000003217	7	0.849	-	-	-	0.849	-	-	-	-	-	-	lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
47.	OSTN	ENSGALG00000007226	33	0.814	-	-	0.814	-	-	-	-	-	-	-	osteocrin [Source:NCBI gene;Acc:424907]
48.	CDX2	ENSGALG00000034983	34	0.807	-	-	-	0.807	-	-	-	-	-	-	caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
49.	EPB42	ENSGALG00000021230	20	0.805	-	-	-	0.805	-	-	-	-	-	-	Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
50.	EVX1	ENSGALG00000037310	1974	0.796	-	-	0.796	-	-	-	-	-	-	-	even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
51.	CD101		12	0.794	-	-	-	0.794	-	-	-	-	-	-	CD101 molecule, transcript variant X4
52.	HYDIN	ENSGALG00000002407	3	0.778	-	-	0.778	-	-	-	-	-	-	-	HYDIN, axonemal central pair apparatus protein [Source:NCBI gene;Acc:427538]
53.	F8	ENSGALG00000005077	56	0.763	-	-	-	0.763	-	-	-	-	-	-	coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
54.	MAPK8IP1		2	0.753	-	-	0.753	-	-	-	-	-	-	-	mitogen-activated protein kinase 8 interacting protein 1, transcript variant X1
55.	GMPR	ENSGALG00000012705	30	0.737	-	-	0.737	-	-	-	-	-	-	-	guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
56.	YTHDF3	ENSGALG00000039774	170	0.733	-	-	-	0.733	-	-	-	-	-	-	YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
57.	CBLN4	ENSGALG00000030821	9	0.72	-	-	0.720	-	-	-	-	-	-	-	cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
58.	B3GALT6	ENSGALG00000001859	5	0.71	-	-	0.710	-	-	-	-	-	-	-	beta-1,3-galactosyltransferase 6