Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDX1

Gene Name Gene ID Reads Annotation
PDX1 ENSGALG00000038454 1 pancreatic and duodenal homeobox 1











Genes with expression patterns similar to PDX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDX1 ENSGALG00000038454 1 2 - - 1.000 1.000 - - - - - - pancreatic and duodenal homeobox 1
2. NKX6-3 ENSGALG00000018503 1 1 - - 1.000 - - - - - - - NK6 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:26328]
3. SMIM15 ENSGALG00000023443 4 1 - - 1.000 - - - - - - - small integral membrane protein 15 [Source:NCBI gene;Acc:770642]
4. CSF3 ENSGALG00000030907 11 1 - - 1.000 - - - - - - - colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
5. B-BTN2 B-BTN2 1 1 - - - 1.000 - - - - - -
6. RPA3-AS1 RPA3-AS1 2 1 - - 1.000 - - - - - - -
7. SLC26A2 ENSGALG00000001239 3 1 - - 1.000 - - - - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
8. gga-mir-130b ENSGALG00000030434 125 1 - - 1.000 - - - - - - - gga-mir-130b [Source:miRBase;Acc:MI0001239]
9. gga-mir-18b ENSGALG00000018324 0 1 - - 1.000 - - - - - - - gga-mir-18b [Source:miRBase;Acc:MI0001209]
10. ENSGALG00000006114 ENSGALG00000006114 1 1 - - 1.000 - - - - - - -
11. KLHL8 ENSGALG00000011017 3 1 - - 1.000 - - - - - - - kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
12. TSNARE1 ENSGALG00000037014 2 1 - - 1.000 - - - - - - - t-SNARE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26437]
13. LNX1 ENSGALG00000013940 2 1 - - 1.000 - - - - - - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
14. HOXD10 ENSGALG00000009270 66 1 - - 1.000 - - - - - - - homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
15. ENSGALG00000027945 ENSGALG00000027945 2 1 - - - 1.000 - - - - - -
16. BPIFB7 BPIFB7 22 1 - - 1.000 - - - - - - -
17. LINS LINS 18 1 - - 1.000 - - - - - - -
18. P2RY4 ENSGALG00000004346 11 1 - - - 1.000 - - - - - - pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
19. ENSGALG00000023581 ENSGALG00000023581 0 1 - - 1.000 - - - - - - -
20. TMEM56 ENSGALG00000005580 10 1 - - - 1.000 - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
21. AIFM3 ENSGALG00000007720 28 1 - - - 1.000 - - - - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
22. NEUROD1 ENSGALG00000008908 3 1 - - 1.000 - - - - - - - neuronal differentiation 1 [Source:NCBI gene;Acc:395754]
23. BRS3.5 BRS3.5 0 1 - - 1.000 - - - - - - -
24. C6orf58 ENSGALG00000045522 2 1 - - - 1.000 - - - - - - chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
25. APOAIV APOAIV 5 1 - - 1.000 - - - - - - -
26. CASZ1 ENSGALG00000002888 2 1 - - 1.000 - - - - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
27. SNORD12 SNORD12 1 1 - - 1.000 - - - - - - -
28. TPP1 52 1 - - - 1.000 - - - - - - tripeptidyl peptidase 1
29. TPH1 ENSGALG00000006236 21 1 - - 1.000 - - - - - - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
30. GP5 ENSGALG00000045125 3 1 - - 1.000 - - - - - - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
31. C14orf159 C14orf159 7 1 - - - 1.000 - - - - - -
32. DNER ENSGALG00000002958 3 1 - - 1.000 - - - - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
33. CHB1 CHB1 0 1 - - 1.000 - - - - - - -
34. GABRA4 ENSGALG00000014202 1 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
35. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - 1.000 - - - - - -
36. CLPS ENSGALG00000034934 2 1 - - 1.000 - - - - - - - colipase [Source:NCBI gene;Acc:771102]
37. PLEKHN1 ENSGALG00000002121 0 1 - - 1.000 - - - - - - - pleckstrin homology domain containing N1 [Source:HGNC Symbol;Acc:HGNC:25284]
38. C15orf60 C15orf60 16 1 - - - 1.000 - - - - - -
39. ENSGALG00000028667 ENSGALG00000028667 1 1 - - - 1.000 - - - - - -
40. PPM1H ENSGALG00000009805 3 1 - - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
41. ANXA13 ENSGALG00000036418 5 1 - - 1.000 - - - - - - - annexin A13 [Source:NCBI gene;Acc:420342]
42. NOX3 ENSGALG00000013659 4 1 - - 1.000 - - - - - - - NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
43. ATRN ENSGALG00000016034 16 0.918 - - 0.918 - - - - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
44. CRYBA2 ENSGALG00000011354 14 0.905 - - - 0.905 - - - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
45. LITAF ENSGALG00000003217 7 0.849 - - - 0.849 - - - - - - lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
46. CHRM2 ENSGALG00000012894 21 0.849 - - - 0.849 - - - - - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
47. OSTN ENSGALG00000007226 33 0.814 - - 0.814 - - - - - - - osteocrin [Source:NCBI gene;Acc:424907]
48. CDX2 ENSGALG00000034983 34 0.807 - - - 0.807 - - - - - - caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
49. EPB42 ENSGALG00000021230 20 0.805 - - - 0.805 - - - - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
50. EVX1 ENSGALG00000037310 1974 0.796 - - 0.796 - - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
51. CD101 12 0.794 - - - 0.794 - - - - - - CD101 molecule, transcript variant X4
52. HYDIN ENSGALG00000002407 3 0.778 - - 0.778 - - - - - - - HYDIN, axonemal central pair apparatus protein [Source:NCBI gene;Acc:427538]
53. F8 ENSGALG00000005077 56 0.763 - - - 0.763 - - - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
54. MAPK8IP1 2 0.753 - - 0.753 - - - - - - - mitogen-activated protein kinase 8 interacting protein 1, transcript variant X1
55. GMPR ENSGALG00000012705 30 0.737 - - 0.737 - - - - - - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
56. YTHDF3 ENSGALG00000039774 170 0.733 - - - 0.733 - - - - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
57. CBLN4 ENSGALG00000030821 9 0.72 - - 0.720 - - - - - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
58. B3GALT6 ENSGALG00000001859 5 0.71 - - 0.710 - - - - - - - beta-1,3-galactosyltransferase 6
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA