Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDX1

Gene Name Gene ID Reads Annotation
PDX1 ENSG00000139515 590 pancreatic and duodenal homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6107]



Genes with expression patterns similar to PDX1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PDX1 ENSG00000139515 590 2 1.000 1.000 pancreatic and duodenal homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6107]
2. ANKRD20A19P ENSG00000196593 2 1 1.000 - ankyrin repeat domain 20 family member A19, pseudogene [Source:HGNC Symbol;Acc:HGNC:42737]
3. ADAM7 ENSG00000069206 3 1 1.000 - ADAM metallopeptidase domain 7 [Source:HGNC Symbol;Acc:HGNC:214]
4. LOC100505658 6 1 1.000 - uncharacterized LOC100505658
5. LINC01268 ENSG00000227502 3 1 1.000 - long intergenic non-protein coding RNA 1268 [Source:HGNC Symbol;Acc:HGNC:50323]
6. PCED1B-AS1 ENSG00000247774 4 1 1.000 - PCED1B antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44166]
7. PLG ENSG00000122194 160 1 1.000 - plasminogen [Source:HGNC Symbol;Acc:HGNC:9071]
8. SPRED3 ENSG00000188766 5 1 1.000 - sprouty related EVH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31041]
9. LOC101927356 3 1 1.000 - uncharacterized LOC101927356, transcript variant 2
10. LOC101929084 2 1 1.000 - uncharacterized LOC101929084
11. DBET ENSG00000281591 3 1 1.000 - D4Z4 binding element transcript [Source:HGNC Symbol;Acc:HGNC:43904]
12. PMS2P5 ENSG00000123965 4 1 1.000 - PMS1 homolog 2, mismatch repair system component pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:9130]
13. AVPR2 ENSG00000126895 2 1 1.000 - arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]
14. LINC00581 ENSG00000280989 2 1 1.000 - long intergenic non-protein coding RNA 581 [Source:HGNC Symbol;Acc:HGNC:43840]
15. LYPD2 ENSG00000197353 2 1 1.000 - LY6/PLAUR domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25215]
16. DNAJB8 ENSG00000179407 2 1 1.000 - DnaJ heat shock protein family (Hsp40) member B8 [Source:HGNC Symbol;Acc:HGNC:23699]
17. LINC01127 ENSG00000281162 2 1 1.000 - long intergenic non-protein coding RNA 1127 [Source:HGNC Symbol;Acc:HGNC:49292]
18. GTF2IP1 ENSG00000277053 3 1 1.000 - general transcription factor IIi pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4660]
19. STKLD1 ENSG00000198870, ENSG00000281245 5 1 1.000 - serine/threonine kinase like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28669]
20. C1orf87 ENSG00000162598 2 1 1.000 - chromosome 1 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:28547]
21. TSPAN16 ENSG00000130167 2 1 1.000 - tetraspanin 16 [Source:HGNC Symbol;Acc:HGNC:30725]
22. PCDHAC1 ENSG00000248383 2 1 1.000 - protocadherin alpha subfamily C, 1 [Source:HGNC Symbol;Acc:HGNC:8676]
23. FAM217A ENSG00000145975 2 1 1.000 - family with sequence similarity 217 member A [Source:HGNC Symbol;Acc:HGNC:21362]
24. C7orf62 7 1 1.000 - chromosome 7 open reading frame 62, transcript variant X1
25. LOC100128176 LOC100128176 2 1 1.000 -
26. SCARNA11 ENSG00000251898 18 0.963 0.963 - small Cajal body-specific RNA 11 [Source:HGNC Symbol;Acc:HGNC:32568]
27. CRYGN ENSG00000127377 24 0.897 0.897 - crystallin gamma N [Source:HGNC Symbol;Acc:HGNC:20458]
28. NR5A2 ENSG00000116833 757 0.89 - 0.890 nuclear receptor subfamily 5 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7984]
29. CPA2 ENSG00000158516 457 0.876 - 0.876 carboxypeptidase A2 [Source:HGNC Symbol;Acc:HGNC:2297]
30. ZEB2-AS1 ENSG00000238057 18 0.872 0.872 - ZEB2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37149]
31. SV2B ENSG00000185518 272 0.867 - 0.867 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
32. UOX ENSG00000240520 6 0.866 0.866 - urate oxidase (pseudogene) [Source:HGNC Symbol;Acc:HGNC:12575]
33. SLC22A7 ENSG00000137204 6 0.853 0.853 - solute carrier family 22 member 7 [Source:HGNC Symbol;Acc:HGNC:10971]
34. SYNE1-AS1 ENSG00000234577 6 0.853 0.853 - SYNE1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40793]
35. PTF1A ENSG00000168267 232 0.853 - 0.853 pancreas associated transcription factor 1a [Source:HGNC Symbol;Acc:HGNC:23734]
36. HIST1H4A ENSG00000278637 16 0.853 0.853 - histone cluster 1 H4 family member a [Source:HGNC Symbol;Acc:HGNC:4781]
37. TM4SF4 ENSG00000169903 1352 0.846 - 0.846 transmembrane 4 L six family member 4 [Source:HGNC Symbol;Acc:HGNC:11856]
38. EPCAM ENSG00000119888 1090 0.842 - 0.842 epithelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:11529]
39. LOC613037 10 0.84 0.840 - nuclear pore complex interacting protein member, transcript variant X9
40. SLC16A12 ENSG00000152779 142 0.84 - 0.840 solute carrier family 16 member 12 [Source:HGNC Symbol;Acc:HGNC:23094]
41. F3 ENSG00000117525 303 0.835 - 0.835 coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]
42. SPINK1 ENSG00000164266 34921 0.83 - 0.830 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
43. LOC101928254 7 0.815 0.815 - uncharacterized LOC101928254, transcript variant 2
44. C15orf32 ENSG00000183643 8 0.815 0.815 - chromosome 15 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]
45. MAL2 ENSG00000147676 671 0.814 - 0.814 mal, T cell differentiation protein 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:13634]
46. AMZ1 ENSG00000174945 4 0.811 0.811 - archaelysin family metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:22231]
47. LINC00595 6 0.811 0.811 - long intergenic non-protein coding RNA 595
48. CLPS ENSG00000137392 9 0.808 - 0.808 colipase [Source:HGNC Symbol;Acc:HGNC:2085]
49. PIK3AP1 ENSG00000155629 143 0.8 - 0.800 phosphoinositide-3-kinase adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:30034]
50. UGDH ENSG00000109814 12537 0.799 - 0.799 UDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]
51. DSCR8 ENSG00000198054 4 0.782 0.782 - Down syndrome critical region 8 [Source:HGNC Symbol;Acc:HGNC:16707]
52. LINC00557 ENSG00000260962 4 0.782 0.782 - long intergenic non-protein coding RNA 557 [Source:HGNC Symbol;Acc:HGNC:43701]
53. RTBDN ENSG00000132026 5 0.782 0.782 - retbindin [Source:HGNC Symbol;Acc:HGNC:30310]
54. LINC00518 ENSG00000183674 15 0.781 0.781 - long intergenic non-protein coding RNA 518 [Source:HGNC Symbol;Acc:HGNC:28626]
55. TAF1L ENSG00000122728 8 0.779 0.779 - TATA-box binding protein associated factor 1 like [Source:HGNC Symbol;Acc:HGNC:18056]
56. KCNIP4-IT1 ENSG00000280650 19 0.779 0.779 - KCNIP4 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:29895]
57. BEX5 ENSG00000184515 877 0.777 - 0.777 brain expressed X-linked 5 [Source:HGNC Symbol;Acc:HGNC:27990]
58. GPR160 ENSG00000173890 139 0.775 - 0.775 G protein-coupled receptor 160 [Source:HGNC Symbol;Acc:HGNC:23693]
59. CCDC89 ENSG00000179071 18 0.773 0.773 - coiled-coil domain containing 89 [Source:HGNC Symbol;Acc:HGNC:26762]
60. TEX11 ENSG00000120498 65 0.772 - 0.772 testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
61. PAQR9 ENSG00000188582 93 0.767 0.767 - progestin and adipoQ receptor family member 9 [Source:HGNC Symbol;Acc:HGNC:30131]
62. GATM ENSG00000171766 560 0.765 - 0.765 glycine amidinotransferase [Source:HGNC Symbol;Acc:HGNC:4175]
63. EHF ENSG00000135373 38 0.761 - 0.761 ETS homologous factor [Source:HGNC Symbol;Acc:HGNC:3246]
64. PHOX2A ENSG00000165462 30 0.758 0.758 - paired like homeobox 2A [Source:HGNC Symbol;Acc:HGNC:691]
65. COL5A3 ENSG00000080573 26 0.757 0.757 - collagen type V alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:14864]
66. GRIN2C ENSG00000161509 10 0.756 0.756 - glutamate ionotropic receptor NMDA type subunit 2C [Source:HGNC Symbol;Acc:HGNC:4587]
67. FGF17 ENSG00000158815 6 0.752 0.752 - fibroblast growth factor 17 [Source:HGNC Symbol;Acc:HGNC:3673]
68. EYS ENSG00000188107 5 0.75 0.750 - eyes shut homolog (Drosophila) [Source:HGNC Symbol;Acc:HGNC:21555]
69. C1orf116 ENSG00000182795 37 0.75 - 0.750 chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
70. ANGPT2 ENSG00000091879 602 0.744 - 0.744 angiopoietin 2 [Source:HGNC Symbol;Acc:HGNC:485]
71. PRSS16 ENSG00000112812 49 0.739 - 0.739 serine protease 16 [Source:HGNC Symbol;Acc:HGNC:9480]
72. ANXA4 ENSG00000196975 1020 0.737 - 0.737 annexin A4 [Source:HGNC Symbol;Acc:HGNC:542]
73. GALNT4 ENSG00000257594 15 0.737 0.737 - polypeptide N-acetylgalactosaminyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:4126]
74. CELA3A ENSG00000142789 18 0.736 - 0.736 chymotrypsin like elastase family member 3A [Source:HGNC Symbol;Acc:HGNC:15944]
75. ANKRD23 ENSG00000163126 21 0.735 0.735 - ankyrin repeat domain 23 [Source:HGNC Symbol;Acc:HGNC:24470]
76. SLC4A4 ENSG00000080493 366 0.734 - 0.734 solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
77. RAB17 ENSG00000124839 39 0.733 - 0.733 RAB17, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16523]
78. PINK1 ENSG00000158828 7 0.732 0.732 - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
79. SIAH3 ENSG00000215475 20 0.73 0.730 - siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
80. JAG1 ENSG00000101384 2164 0.729 - 0.729 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
81. TJP2 ENSG00000119139 1262 0.727 - 0.727 tight junction protein 2 [Source:HGNC Symbol;Acc:HGNC:11828]
82. CDH1 ENSG00000039068 594 0.726 - 0.726 cadherin 1 [Source:HGNC Symbol;Acc:HGNC:1748]
83. CLEC3B ENSG00000163815 12 0.725 0.725 - C-type lectin domain family 3 member B [Source:HGNC Symbol;Acc:HGNC:11891]
84. HRASLS5 ENSG00000168004 86 0.724 - 0.724 HRAS like suppressor family member 5 [Source:HGNC Symbol;Acc:HGNC:24978]
85. LOC101060553 5 0.723 0.723 - uncharacterized LOC101060553
86. RIPK4 ENSG00000183421 163 0.723 - 0.723 receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
87. DRICH1 ENSG00000189269 22 0.723 - 0.723 aspartate rich 1 [Source:HGNC Symbol;Acc:HGNC:28031]
88. CHRDL2 ENSG00000054938 9 0.718 0.718 - chordin like 2 [Source:HGNC Symbol;Acc:HGNC:24168]
89. OR51V1 ENSG00000176742 12 0.717 0.717 - olfactory receptor family 51 subfamily V member 1 [Source:HGNC Symbol;Acc:HGNC:19597]
90. LOC101927746 5 0.714 0.714 - uncharacterized LOC101927746
91. FAM3B ENSG00000183844 48 0.711 - 0.711 family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
92. LINC01280 ENSG00000224391 5 0.704 0.704 - long intergenic non-protein coding RNA 1280 [Source:HGNC Symbol;Acc:HGNC:50336]
93. RBPJL ENSG00000124232 19 0.702 - 0.702 recombination signal binding protein for immunoglobulin kappa J region like [Source:HGNC Symbol;Acc:HGNC:13761]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA