Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDSS2

Gene Name Gene ID Reads Annotation
PDSS2 ENSGALG00000015313 280 Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 2 (PDSS2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318441]











Genes with expression patterns similar to PDSS2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDSS2 ENSGALG00000015313 280 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 2 (PDSS2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318441]
2. BACH1 ENSGALG00000015828 114 1.676 - - - - 0.834 - - - 0.842 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
3. UGGT2 ENSGALG00000016893 206 0.956 - - - - - - 0.956 - - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:NCBI gene;Acc:418785]
4. ENSGALG00000000099 ENSGALG00000000099 16 0.929 - - - - - - 0.929 - - -
5. LHX4 ENSGALG00000036587 14 0.929 - - - - - - 0.929 - - - LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]
6. OLFML1 ENSGALG00000027184 19 0.929 - - - - - - 0.929 - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
7. OVST_1 ENSGALG00000011930 9 0.929 - - - - - - 0.929 - - - ovostatin [Source:NCBI gene;Acc:396151]
8. TMCO4 ENSGALG00000004081 31 0.929 - - - - - - 0.929 - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
9. GALNT11 ENSGALG00000006233 210 0.929 - - - - - - 0.929 - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
10. WIPF2 ENSGALG00000037633 178 0.929 - - - - - - 0.929 - - - WAS/WASL interacting protein family member 2 [Source:HGNC Symbol;Acc:HGNC:30923]
11. PSKH1 5 0.929 - - - - - - 0.929 - - - protein serine kinase H1, transcript variant X1
12. RUNX3 ENSGALG00000043372 43 0.929 - - - - - - 0.929 - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
13. BTBD3 ENSGALG00000009028 45 0.929 - - - - - - 0.929 - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
14. MYRF ENSGALG00000041253 13 0.929 - - - - - - 0.929 - - - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
15. DCLK3 ENSGALG00000034493 50 0.929 - - - - - - 0.929 - - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
16. SLC44A3 ENSGALG00000005610 18 0.929 - - - - - - 0.929 - - - solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
17. MYH7 ENSGALG00000035594 188 0.929 - - - - - - 0.929 - - - myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
18. B3GAT1L ENSGALG00000015075 2 0.929 - - - - - - 0.929 - - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
19. ENTPD2 ENSGALG00000039696 3 0.929 - - - - - - 0.929 - - - ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
20. OTC ENSGALG00000016254 6 0.929 - - - - - - 0.929 - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
21. ST3GAL2 ENSGALG00000002651 20 0.929 - - - - - - 0.929 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
22. ENSGALG00000024266 ENSGALG00000024266 5 0.929 - - - - - - 0.929 - - -
23. QRSL1 ENSGALG00000015338 16 0.929 - - - - - - 0.929 - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
24. ENSGALG00000012780 ENSGALG00000012780 10 0.929 - - - - - - 0.929 - - -
25. PIK3C3 ENSGALG00000035773 52 0.929 - - - - - - 0.929 - - - phosphatidylinositol 3-kinase catalytic subunit type 3 [Source:HGNC Symbol;Acc:HGNC:8974]
26. ENSGALG00000023791 ENSGALG00000023791 3 0.929 - - - - - - 0.929 - - -
27. LOC415324 ENSGALG00000002097 17 0.929 - - - - - - 0.929 - - - epididymal protein-like, transcript variant X16
28. URB2 ENSGALG00000011101 12 0.929 - - - - - - 0.929 - - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
29. ENSGALG00000026204 ENSGALG00000026204 2 0.929 - - - - - - 0.929 - - -
30. NEK8 ENSGALG00000003979 4 0.929 - - - - - - 0.929 - - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
31. TMEM52B ENSGALG00000034698 169 0.91 - - - - - - 0.910 - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
32. RUFY2 1442 0.907 - - - - - - - - 0.907 - RUN and FYVE domain containing 2, transcript variant X1
33. KRT19 ENSGALG00000019719 38711 0.904 - - - - - - - - 0.904 - keratin 19 [Source:NCBI gene;Acc:395861]
34. HAGH ENSGALG00000005398 168 0.902 - - - - - - - - 0.902 - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
35. CELF2 ENSGALG00000034590 31 0.894 - - - - - - 0.894 - - - CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
36. FRA10AC1 ENSGALG00000006622 286 0.89 - - - - - - - - 0.890 - FRA10A associated CGG repeat 1 [Source:HGNC Symbol;Acc:HGNC:1162]
37. GRIK3 ENSGALG00000002098 111 0.89 - - - - - - 0.890 - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
38. CHAMP1 ENSGALG00000016813 508 0.885 - - - - - - - - 0.885 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
39. LRP12 ENSGALG00000033630 2534 0.883 - - - - - - - - 0.883 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
40. DTX3L ENSGALG00000012075 399 0.882 - - - - - - - - 0.882 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
41. PEX3 ENSGALG00000013777 3158 0.879 - - - - - - - - 0.879 - peroxisomal biogenesis factor 3
42. CDX1 ENSGALG00000005679 461 0.878 - - - - - - 0.878 - - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
43. CSRP1 ENSGALG00000000318 3702 0.876 - - - - - - - - 0.876 - cysteine and glycine rich protein 1 [Source:NCBI gene;Acc:396176]
44. TRIM3 ENSGALG00000034004 110 0.876 - - - - - - - - 0.876 - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
45. TLN1 ENSGALG00000002548 489 0.872 - - - - - - - - 0.872 - talin 1 [Source:NCBI gene;Acc:395194]
46. XPOT ENSGALG00000009835 2953 0.869 - - - - - - - - 0.869 - exportin for tRNA [Source:NCBI gene;Acc:417824]
47. PGS1 ENSGALG00000007181 3187 0.869 - - - - - - - - 0.869 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
48. GRIN3A ENSGALG00000015551 856 0.869 - - - - - - - - 0.869 - glutamate ionotropic receptor NMDA type subunit 3A [Source:HGNC Symbol;Acc:HGNC:16767]
49. SENP2 ENSGALG00000031128 1162 0.868 - - - - - - - - 0.868 - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
50. VWF ENSGALG00000017272 1012 0.866 - - - - - - - - 0.866 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
51. CREB5 ENSGALG00000038265 92 0.864 - - - - - - - - 0.864 - cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
52. TULP4 ENSGALG00000037377 563 0.863 - - - - - - - - 0.863 - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
53. MAP3K5 ENSGALG00000013892 565 0.861 - - - - - - - - 0.861 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
54. PM20D1 ENSGALG00000000724 2108 0.854 - - - - - - - - 0.854 - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
55. LRRC59 ENSGALG00000007673 2081 0.853 - - - - - - - - 0.853 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
56. SLC45A3 ENSGALG00000000703 85 0.848 - - - - - - - - 0.848 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
57. SLTM ENSGALG00000004192 3244 0.846 - - - - - - - - 0.846 - SAFB like transcription modulator [Source:HGNC Symbol;Acc:HGNC:20709]
58. LHCGR ENSGALG00000009095 174 0.844 - - - - - - - - 0.844 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
59. CEP170 ENSGALG00000010733 4177 0.844 - - - - - - - - 0.844 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
60. CAMKK1 ENSGALG00000001617 64 0.844 - - - - - - - - 0.844 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
61. MDN1 ENSGALG00000015733 2352 0.842 - - - - - - - - 0.842 - midasin AAA ATPase 1, transcript variant X1
62. PCLO 249 0.841 - - - - - - - - 0.841 - piccolo presynaptic cytomatrix protein
63. C1orf131 C1orf131 141 0.841 - - - - - - - - 0.841 -
64. AASDH ENSGALG00000013764 1062 0.841 - - - - - - - - 0.841 - aminoadipate-semialdehyde dehydrogenase [Source:HGNC Symbol;Acc:HGNC:23993]
65. SERINC2 ENSGALG00000021685 1581 0.839 - - - - - - - - 0.839 - serine incorporator 2 [Source:NCBI gene;Acc:419558]
66. SH3D19 ENSGALG00000010081 52 0.839 - - - - - - - - 0.839 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
67. GPR39 ENSGALG00000012171 420 0.837 - - - - - - 0.837 - - - G protein-coupled receptor 39 [Source:NCBI gene;Acc:424282]
68. TRIP11 ENSGALG00000010763 3146 0.837 - - - - - - - - 0.837 - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
69. SLC39A10 ENSGALG00000007777 272 0.837 - - - - - - - - 0.837 - solute carrier family 39 member 10 [Source:HGNC Symbol;Acc:HGNC:20861]
70. MSANTD4 ENSGALG00000017177 3306 0.836 - - - - - - - - 0.836 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
71. IFT88 1241 0.833 - - - - - - - - 0.833 - intraflagellar transport 88, transcript variant X3
72. CEP112 ENSGALG00000034989 123 0.832 - - - - - - - - 0.832 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
73. ODZ2 ODZ2 1380 0.83 - - - - - - - - 0.830 -
74. CHRNA7 ENSGALG00000004096 107 0.829 - - - - - - - - 0.829 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
75. SNCAIP ENSGALG00000005330 2425 0.826 - - - - - - - - 0.826 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
76. SLCO4A1 ENSGALG00000005460 109 0.826 - - - - - - - - 0.826 - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
77. TOM1L2 ENSGALG00000004902 89 0.825 - - - - - - - - 0.825 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
78. PIH1D3 ENSGALG00000004870 1365 0.825 - - - - - - - - 0.825 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
79. NTL ENSGALG00000005156 278 0.823 - - - - - - - - 0.823 - neurotrypsin-like, transcript variant X7
80. WBSCR27 3511 0.821 - - - - - - - - 0.821 - Williams Beuren syndrome chromosome region 27
81. FAM120B ENSGALG00000011180 101 0.821 - - - - - - - - 0.821 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
82. YBX3 ENSGALG00000031890 819 0.821 - - - - - - - - 0.821 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
83. TTLL5 ENSGALG00000010340 4875 0.821 - - - - - - - - 0.821 - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
84. TPM4 ENSGALG00000002563 15621 0.82 - - - - - - - - 0.820 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
85. ABCC8 ENSGALG00000006172 41 0.82 - - - - - - - - 0.820 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
86. EPFIP1L ENSGALG00000007683 18050 0.819 - - - - - - - - 0.819 - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
87. CHD2 ENSGALG00000006949 1076 0.818 - - - - - - - - 0.818 - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
88. KCNQ5 ENSGALG00000037249 321 0.818 - - - - - - - - 0.818 - potassium voltage-gated channel subfamily Q member 5 [Source:HGNC Symbol;Acc:HGNC:6299]
89. KRT14 ENSGALG00000003690 682 0.816 - - - - - - - - 0.816 - keratin 14 [Source:NCBI gene;Acc:408039]
90. CNOT6 ENSGALG00000034316 10496 0.816 - - - - - - - - 0.816 - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
91. ROPN1L ENSGALG00000013006 97 0.816 - - - - - - - 0.816 - - rhophilin associated tail protein 1 like [Source:HGNC Symbol;Acc:HGNC:24060]
92. CARS2 ENSGALG00000016847 3814 0.815 - - - - - - - - 0.815 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
93. CISD1 ENSGALG00000002705 999 0.814 - - - - - - - - 0.814 - CDGSH iron sulfur domain 1 [Source:NCBI gene;Acc:423642]
94. ZNF618 ENSGALG00000008886 1326 0.813 - - - - - - - - 0.813 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
95. GDPD2 ENSGALG00000005842 86 0.812 - - - - - - - - 0.812 - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
96. KIF13A ENSGALG00000012689 119 0.811 - - - - 0.811 - - - - - kinesin family member 13A [Source:HGNC Symbol;Acc:HGNC:14566]
97. PRDM15 ENSGALG00000019178 2729 0.811 - - - - - - - - 0.811 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
98. GPR132 ENSGALG00000027407 9 0.81 - - - - - - 0.810 - - - G protein-coupled receptor 132, transcript variant X2
99. ALMS1 ENSGALG00000044620 570 0.809 - - - - - - - - 0.809 - ALMS1, centrosome and basal body associated protein, transcript variant X1
100. HIC2 ENSGALG00000033416 4051 0.809 - - - - - - - - 0.809 - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]

There are 218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA