Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDSS1

Gene Name Gene ID Reads Annotation
PDSS1 ENSGALG00000007559 432 Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 1 (PDSS1), mRNA. [Source:RefSeq mRNA;Acc:NM_001321600]











Genes with expression patterns similar to PDSS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDSS1 ENSGALG00000007559 432 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 1 (PDSS1), mRNA. [Source:RefSeq mRNA;Acc:NM_001321600]
2. CYP2H1 CYP2H1 363 0.865 - - - - - - 0.865 - - -
3. TNFSF11 ENSGALG00000026163 26 0.853 - - - - - - 0.853 - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
4. FAM84A ENSGALG00000016459 400 0.843 - - - - - - 0.843 - - - family with sequence similarity 84 member A [Source:HGNC Symbol;Acc:HGNC:20743]
5. IL22RA1 ENSGALG00000004221 71 0.837 - - - - - - 0.837 - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
6. TSPAN4 ENSGALG00000006837 150 0.834 - - - - - - 0.834 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
7. SULF2 ENSGALG00000004593 428 0.833 - - - - - - 0.833 - - - sulfatase 2 [Source:HGNC Symbol;Acc:HGNC:20392]
8. LCAT ENSGALG00000028928 484 0.812 - - - - - - 0.812 - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
9. EDN3 ENSGALG00000040880 1061 0.809 - - - - - - 0.809 - - - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
10. CADM2 ENSGALG00000043393 810 0.801 - - - - - - 0.801 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
11. RPUSD1 ENSGALG00000005315 651 0.801 - - - - - - 0.801 - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
12. ZNF503 ENSGALG00000041935 2895 0.797 - - - - - 0.797 - - - - zinc finger protein 503 [Source:HGNC Symbol;Acc:HGNC:23589]
13. CCDC40 ENSGALG00000007042 596 0.797 - - - - - - 0.797 - - - coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:HGNC:26090]
14. FIBIN ENSGALG00000023904 3350 0.793 - - - - - - 0.793 - - - fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
15. GRIA2 ENSGALG00000009405 275 0.787 - - - - - - 0.787 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
16. MEAF6 ENSGALG00000002013 2208 0.781 - - - - - - 0.781 - - - MYST/Esa1 associated factor 6 [Source:NCBI gene;Acc:419617]
17. RAB8B ENSGALG00000003487 295 0.78 - - - - - - 0.780 - - - RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]
18. NCOA6 ENSGALG00000001182 83 0.779 - - - - - - 0.779 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
19. FGB ENSGALG00000009262 1169 0.777 - - - - - - 0.777 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
20. APBA2 ENSGALG00000003930 408 0.776 - - - - - - 0.776 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
21. PPWD1 ENSGALG00000014756 1118 0.774 - - - - - - - 0.774 - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
22. KDELC2 ENSGALG00000017158 479 0.773 - - - - - - 0.773 - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
23. ENDOV 121 0.772 - - - - - - 0.772 - - - endonuclease V
24. PCGF2 ENSGALG00000018815 38 0.771 - - - - - - 0.771 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
25. NKD1 ENSGALG00000003767 76 0.77 - - - - - - 0.770 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
26. MOCOS ENSGALG00000013149 25 0.768 - - - - - - 0.768 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
27. F2 ENSGALG00000008332 298 0.768 - - - - - - 0.768 - - - coagulation factor II, thrombin [Source:NCBI gene;Acc:395306]
28. MUC5B MUC5B 62 0.764 - - - - - - 0.764 - - -
29. NAPRT1 NAPRT1 227 0.764 - - - - - - 0.764 - - -
30. ENSGALG00000023475 ENSGALG00000023475 19 0.764 - - - - - - 0.764 - - -
31. ANO3 ENSGALG00000013311 16 0.764 - - - - - - 0.764 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
32. DCBLD1 ENSGALG00000014907 19 0.764 - - - - - - 0.764 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
33. C18H17ORF67 ENSGALG00000024428 10 0.764 - - - - - - 0.764 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
34. TEX2 ENSGALG00000003496 23 0.764 - - - - - - 0.764 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
35. SLC45A4 ENSGALG00000034971 142 0.761 - - - - - - 0.761 - - - solute carrier family 45 member 4 [Source:HGNC Symbol;Acc:HGNC:29196]
36. LMCD1 ENSGALG00000008349 928 0.761 - - - - - - 0.761 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
37. YTHDC1 ENSGALG00000035906 471 0.757 - - - - - - 0.757 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
38. ENSGALG00000009344 ENSGALG00000009344 330 0.757 - - - - - - 0.757 - - -
39. LAMP1 ENSGALG00000037697 247 0.757 - - - - - - 0.757 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
40. LIN28A ENSGALG00000036022 542 0.756 - - - - - - 0.756 - - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
41. CPNE7 ENSGALG00000000507 54 0.754 - - - - - - 0.754 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
42. ANKS1B ENSGALG00000011549 440 0.753 - - - - - - 0.753 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
43. DCAF5 ENSGALG00000009463 1297 0.753 - - - - - - 0.753 - - - DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
44. ELK4 ENSGALG00000042137 69 0.752 - - - - - - 0.752 - - - ELK4, ETS transcription factor
45. KYNU ENSGALG00000012418 353 0.752 - - - - - - 0.752 - - - kynureninase, transcript variant X3
46. VTI1B ENSGALG00000009526 133 0.752 - - - - - - 0.752 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
47. MKL2 186 0.752 - - - - - - 0.752 - - - MKL1/myocardin like 2, transcript variant X4
48. SVOPL ENSGALG00000012812 27 0.751 - - - - - - 0.751 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
49. PIDD PIDD 397 0.75 - - - - - - 0.750 - - -
50. ENSGALG00000014900 ENSGALG00000014900 335 0.75 - - - - - - 0.750 - - -
51. TMEM43 ENSGALG00000006345 2284 0.748 - - - - - - 0.748 - - - transmembrane protein 43
52. GUCA2A ENSGALG00000027269 4340 0.748 - - - - - - 0.748 - - - guanylate cyclase activator 2A [Source:NCBI gene;Acc:419498]
53. FAM82B FAM82B 374 0.745 - - - - - - 0.745 - - -
54. FBXL18 ENSGALG00000004611 97 0.743 - - - - - - 0.743 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
55. TC2N ENSGALG00000010738 92 0.743 - - - - - - 0.743 - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
56. KCTD5 ENSGALG00000006423 192 0.743 - - - - - - 0.743 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
57. RAD54B ENSGALG00000043597 1699 0.742 - - - - - - 0.742 - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
58. POFUT1 ENSGALG00000006594 367 0.741 - - - - - - 0.741 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
59. KRT222 ENSGALG00000003859 53 0.74 - - - - - - 0.740 - - - keratin 222 [Source:NCBI gene;Acc:420046]
60. ENSGALG00000029120 ENSGALG00000029120 73 0.74 - - - - - - 0.740 - - -
61. RSBN1 ENSGALG00000001860 761 0.739 - - - - - - 0.739 - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
62. C9orf171 C9orf171 35 0.739 - - - - - - 0.739 - - -
63. TSPAN14 ENSGALG00000002414 69 0.738 - - - - - - 0.738 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
64. FAM76B ENSGALG00000017202 688 0.735 - - - - - - 0.735 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
65. PRKCE ENSGALG00000010000 99 0.735 - - - - - - 0.735 - - - protein kinase C epsilon, transcript variant X1
66. AMACR ENSGALG00000003326 2657 0.733 - - - - - - 0.733 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
67. RIPPLY2 ENSGALG00000015845 34 0.733 - - - - - - 0.733 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
68. HTR2C ENSGALG00000005853 90 0.732 - - - - - - 0.732 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
69. ATP6V1AL ENSGALG00000000048 21 0.73 - - - - - - 0.730 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
70. DDX28 ENSGALG00000003415 979 0.729 - - - - - - 0.729 - - - DEAD-box helicase 28
71. TDRD5 ENSGALG00000033634 40 0.728 - - - - - - 0.728 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
72. KCNQ1 ENSGALG00000037138 179 0.728 - - - - - - 0.728 - - - potassium voltage-gated channel subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:6294]
73. ANGPTL3 ENSGALG00000010978 335 0.727 - - - - - - 0.727 - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
74. NDNF ENSGALG00000011962 2261 0.725 - - - - - 0.725 - - - - neuron-derived neurotrophic factor, transcript variant X4
75. ARHGAP15 ENSGALG00000012421 58 0.725 - - - - - - 0.725 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
76. FAM21A FAM21A 251 0.725 - - - - - - 0.725 - - -
77. MAP3K1 ENSGALG00000014718 60 0.724 - - - - - - 0.724 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
78. ENSGALG00000001515 ENSGALG00000001515 833 0.724 - - - - - - 0.724 - - -
79. SNORD2 SNORD2 51 0.723 - - - - - - 0.723 - - -
80. PCP4 ENSGALG00000022819 880 0.723 - - - - - - 0.723 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
81. ALS2CL ENSGALG00000005430 161 0.722 - - - - - - 0.722 - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
82. CEP85 ENSGALG00000042624 59 0.722 - - 0.722 - - - - - - - centrosomal protein 85 [Source:HGNC Symbol;Acc:HGNC:25309]
83. MRVI1 ENSGALG00000005632 450 0.721 - - - - - - 0.721 - - - murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
84. NPTXR ENSGALG00000041604 256 0.721 - - 0.721 - - - - - - - neuronal pentraxin receptor [Source:HGNC Symbol;Acc:HGNC:7954]
85. VPS72 ENSGALG00000000793 329 0.72 - - 0.720 - - - - - - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
86. SLC12A2 ENSGALG00000014690 48 0.719 - - - - - - - 0.719 - - solute carrier family 12 member 2 [Source:HGNC Symbol;Acc:HGNC:10911]
87. TP53I3 ENSGALG00000016502 178 0.719 - - - - - - 0.719 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
88. PDE4D ENSGALG00000014727 53 0.719 - - - - - - 0.719 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
89. CRY2 ENSGALG00000008436 1732 0.717 - - - - - - 0.717 - - - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
90. PHTF2 ENSGALG00000008335 722 0.717 - - - - - - 0.717 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
91. ENSGALG00000012463 ENSGALG00000012463 242 0.716 - - - - - - 0.716 - - -
92. BTG2 ENSGALG00000026858 6716 0.715 - - - - - - 0.715 - - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
93. LOC770996 ENSGALG00000016570 635 0.714 - - - - - - 0.714 - - - L-gulonolactone oxidase-like
94. HRSP12 HRSP12 1165 0.714 - - - - - - 0.714 - - -
95. GPATCH3 ENSGALG00000000881 113 0.714 - - - - - - - 0.714 - - G-patch domain containing 3 [Source:NCBI gene;Acc:419577]
96. BBS12 142 0.712 - - - - - - 0.712 - - - Bardet-Biedl syndrome 12
97. TGFBR3 ENSGALG00000006038 2951 0.712 - - - - - - 0.712 - - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
98. PTPRN2 ENSGALG00000030054 947 0.71 - - - - - - 0.710 - - - protein tyrosine phosphatase, receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]
99. KDM5A ENSGALG00000012986 624 0.709 - - - - - - 0.709 - - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
100. CAPN7 ENSGALG00000041731 114 0.709 - - - - - - 0.709 - - - calpain 7 [Source:HGNC Symbol;Acc:HGNC:1484]

There are 11 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA