Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDS5B

Gene Name Gene ID Reads Annotation
PDS5B ENSGALG00000017070 3998 PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]











Genes with expression patterns similar to PDS5B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDS5B ENSGALG00000017070 3998 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
2. FZD6 ENSGALG00000030626 3336 1.753 - - - - - - - 0.992 - 0.761 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
3. HEXA ENSGALG00000043828 4789 1.742 - - - - - - - 0.995 - 0.747 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
4. PDIA3 ENSGALG00000008348 4982 1.732 - - - - - - - 0.994 - 0.738 protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
5. ANKRD49 ENSGALG00000017210 3247 1.716 - - - - - - 0.724 0.992 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
6. MIPEP ENSGALG00000017118 8666 1.659 - - - - - - - 0.940 - 0.719 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
7. ADD3 ENSGALG00000008542 13814 1.593 - - - - - - - 0.825 - 0.768 adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
8. ENSGALG00000014171 ENSGALG00000014171 10383 1.544 - - - - - - - 0.815 - 0.729
9. GTF2H1 ENSGALG00000042340 1553 0.996 - - - - - - - 0.996 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
10. ELP3 ENSGALG00000016624 4483 0.996 - - - - - - - 0.996 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
11. CHEK2 ENSGALG00000005695 1558 0.995 - - - - - - - 0.995 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
12. PIK3C2B ENSGALG00000037043 4522 0.995 - - - - - - - 0.995 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
13. FPGS ENSGALG00000042460 1749 0.995 - - - - - - - 0.995 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
14. EFNB1 ENSGALG00000036539 2706 0.995 - - - - - - - 0.995 - - ephrin B1 [Source:NCBI gene;Acc:395896]
15. MED1 ENSGALG00000001708 9556 0.995 - - - - - - - 0.995 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
16. ERICH1 ENSGALG00000031021 1495 0.995 - - - - - - - 0.995 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
17. C20ORF7 C20ORF7 2383 0.995 - - - - - - - 0.995 - -
18. MAP9 ENSGALG00000020253 785 0.995 - - - - - - - 0.995 - - microtubule associated protein 9, transcript variant X7
19. C12orf45 C12orf45 2445 0.995 - - - - - - - 0.995 - -
20. ATOX1 ENSGALG00000004176 16486 0.995 - - - - - - - 0.995 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
21. IFT81 ENSGALG00000003854 2534 0.994 - - - - - - - 0.994 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
22. ERAL1 ENSGALG00000003995 1114 0.994 - - - - - - - 0.994 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
23. STXBP3 ENSGALG00000002001 1740 0.994 - - - - - - - 0.994 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
24. UQCC UQCC 5913 0.994 - - - - - - - 0.994 - -
25. ADAMTSL1 1479 0.994 - - - - - - - 0.994 - - ADAMTS like 1, transcript variant X3
26. ANKS1B ENSGALG00000011549 440 0.994 - - - - - - - 0.994 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
27. XPOT ENSGALG00000009835 2953 0.994 - - - - - - - 0.994 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
28. NEK1 ENSGALG00000009683 4305 0.994 - - - - - - - 0.994 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
29. DUSP3 ENSGALG00000035369 1790 0.994 - - - - - - - 0.994 - - dual specificity phosphatase 3
30. FAM69B ENSGALG00000002437 1253 0.994 - - - - - - - 0.994 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
31. PDE4B ENSGALG00000011094 1871 0.994 - - - - - - - 0.994 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
32. VPS39 ENSGALG00000008991 4018 0.994 - - - - - - - 0.994 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
33. CRADD ENSGALG00000011297 1653 0.994 - - - - - - - 0.994 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
34. WDR92 ENSGALG00000008760 3934 0.993 - - - - - - - 0.993 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
35. SOX9 ENSGALG00000004386 14802 0.993 - - - - - - - 0.993 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
36. ARPC5L ENSGALG00000001014 5642 0.992 - - - - - - - 0.992 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
37. DCTN6 ENSGALG00000010298 7507 0.992 - - - - - - - 0.992 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
38. BCL2L1 ENSGALG00000006211 2490 0.991 - - - - - - - 0.991 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
39. TBC1D1 ENSGALG00000039380 4423 0.99 - - - - - - - 0.990 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
40. EIF1AY ENSGALG00000016410 6431 0.989 - - - - - - - 0.989 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
41. FABP3 ENSGALG00000037050 873 0.988 - - - - - - - 0.988 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
42. C4orf46 ENSGALG00000009432 3255 0.987 - - - - - - - 0.987 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
43. EMC7 ENSGALG00000009637 4969 0.987 - - - - - - - 0.987 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
44. PES1 ENSGALG00000007778 12248 0.987 - - - - - - - 0.987 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
45. ZEB1 ENSGALG00000007260 9277 0.986 - - - - - - - 0.986 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
46. SDHA ENSGALG00000013167 6509 0.985 - - - - - - - 0.985 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
47. UBE2B ENSGALG00000032664 6069 0.984 - - - - - - - 0.984 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
48. CABIN1 ENSGALG00000006363 4415 0.982 - - - - - - - 0.982 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
49. TAB2 ENSGALG00000012356 3467 0.978 - - - - - - - 0.978 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
50. SURF6 ENSGALG00000038413 11178 0.972 - - - - - - - 0.972 - - surfeit 6 [Source:NCBI gene;Acc:417160]
51. POLR2H ENSGALG00000008534 21521 0.969 - - - - - - - 0.969 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
52. DEK ENSGALG00000012684 14179 0.969 - - - - - - - 0.969 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
53. CMPK CMPK 9569 0.968 - - - - - - - 0.968 - -
54. LUC7L2 ENSGALG00000036238 11817 0.968 - - - - - - - 0.968 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
55. ACTR3 ENSGALG00000012159 16020 0.965 - - - - - - - 0.965 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
56. PPP2R5D ENSGALG00000040005 6804 0.961 - - - - - - - 0.961 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
57. DYNC1LI1 ENSGALG00000011491 11011 0.959 - - - - - - - 0.959 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
58. SUCLG1 ENSGALG00000015961 14323 0.958 - - - - - - - 0.958 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
59. WDR61 ENSGALG00000003221 11352 0.95 - - - - - - - 0.950 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
60. PDLIM1 ENSGALG00000005422 3385 0.941 - - - - - - - 0.941 - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
61. C28H19ORF10 C28H19ORF10 16529 0.94 - - - - - - - 0.940 - -
62. ARHGAP18 ENSGALG00000031843 2117 0.94 - - - - - - - 0.940 - - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
63. PCMTD2 ENSGALG00000005901 1833 0.938 - - - - - - - 0.938 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
64. POC1A ENSGALG00000034572 1572 0.938 - - - - - - - 0.938 - - POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488]
65. EHMT1 ENSGALG00000033678 5720 0.936 - - - - - - - 0.936 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
66. PUM2 ENSGALG00000016481 23625 0.935 - - - - - - - 0.935 - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
67. XPR1 ENSGALG00000003893 5642 0.933 - - - - - - - 0.933 - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
68. SHISA5 ENSGALG00000004661 8573 0.931 - - - - - - - 0.931 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
69. SPINT1 ENSGALG00000008469 5735 0.93 - - - - - - - 0.930 - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
70. CASK ENSGALG00000042400 8485 0.926 - - - - - - - 0.926 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
71. PFDN2 ENSGALG00000026374 22020 0.926 - - - - - - - 0.926 - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
72. TLE4 TLE4 7278 0.923 - - - - - - - 0.923 - -
73. ACADS ENSGALG00000007072 2737 0.922 - - - - - - - 0.922 - - acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:416969]
74. FDX1 ENSGALG00000026507 2573 0.922 - - - - - - - 0.922 - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
75. GATA6 ENSGALG00000014976 3256 0.92 - - - - - - - 0.920 - - GATA binding protein 6 [Source:NCBI gene;Acc:396390]
76. TET1 ENSGALG00000031604 13002 0.916 - - - - - - - 0.916 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
77. FOXK2 ENSGALG00000001577 6346 0.912 - - - - - - - 0.912 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
78. RAB14 ENSGALG00000001474 12617 0.909 - - - - - - - 0.909 - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
79. ASF1A ENSGALG00000014887 11319 0.899 - - - - - - - 0.899 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
80. CHP1 ENSGALG00000008569 6876 0.898 - - - - - - - 0.898 - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
81. HLX ENSGALG00000037257 5834 0.897 - - - - - - - 0.897 - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
82. BASP1 ENSGALG00000012952 19549 0.895 - - - - - - - 0.895 - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
83. ACTN1 ENSGALG00000042458 10477 0.888 - - - - - - - 0.888 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
84. KIF2A ENSGALG00000014737 16391 0.884 - - - - - - - 0.884 - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
85. NAA15 ENSGALG00000009782 18563 0.883 - - - - - - - 0.883 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
86. TBCA ENSGALG00000004353 18510 0.882 - - - - - - - 0.882 - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
87. SMNDC1 ENSGALG00000008561 14415 0.878 - - - - - - - 0.878 - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
88. FAM168B ENSGALG00000002172 12162 0.863 - - - - - - - 0.863 - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
89. SMC4 ENSGALG00000009553 15715 0.853 - - - - - - - - - 0.853 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
90. CCNE2 ENSGALG00000040794 1229 0.853 - - - - - - - - - 0.853 cyclin E2 [Source:NCBI gene;Acc:420231]
91. PTCH1 ENSGALG00000012620 4840 0.853 - - - - - - - - - 0.853 patched 1 [Source:NCBI gene;Acc:395806]
92. CDC40 ENSGALG00000015061 6118 0.853 - - - - - - - 0.853 - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
93. VWF ENSGALG00000017272 1012 0.849 - - - - - - - - - 0.849 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
94. E2F6 ENSGALG00000016454 4747 0.845 - - - - - - - 0.845 - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
95. SPDL1 ENSGALG00000001942 4403 0.844 - - - - - - - - - 0.844 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
96. N4BP2 ENSGALG00000014281 3144 0.844 - - - - - - - - - 0.844 NEDD4 binding protein 2, transcript variant X6
97. RBM38 ENSGALG00000026081 7115 0.844 - - - - - - - 0.844 - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
98. DKC1 ENSGALG00000005054 30350 0.84 - - - - - - - 0.840 - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
99. RPL22 ENSGALG00000000719 74238 0.834 - - - - - - - - - 0.834 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
100. POLR2D ENSGALG00000002057 14548 0.832 - - - - - - - 0.832 - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]

There are 395 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA