Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDPN

Gene Name Gene ID Reads Annotation
PDPN ENSGALG00000030096 647 podoplanin, transcript variant X4











Genes with expression patterns similar to PDPN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDPN ENSGALG00000030096 647 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 podoplanin, transcript variant X4
2. FAM190B FAM190B 165 1.743 - - 0.758 - - - - - - 0.985
3. PRR14L ENSGALG00000028473 439 1.685 - - 0.758 - - - - - - 0.927 proline rich 14-like, transcript variant X5
4. KDR ENSGALG00000013907 869 1.685 - - - - - - - 0.832 - 0.853 kinase insert domain receptor [Source:NCBI gene;Acc:395323]
5. SOX6 ENSGALG00000006074 102 0.988 - - - - - - - - - 0.988 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
6. PROM1 ENSGALG00000014496 2494 0.987 - - - - - - - - - 0.987 prominin 1 [Source:NCBI gene;Acc:422825]
7. SLC2A3 SLC2A3 527 0.987 - - - - - - - - - 0.987
8. CNTRL ENSGALG00000001513 1773 0.986 - - - - - - - - - 0.986 centriolin [Source:NCBI gene;Acc:417121]
9. IL10R2 IL10R2 72 0.985 - - - - - - - - - 0.985
10. AURKA ENSGALG00000007768 793 0.985 - - - - - - - - - 0.985 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
11. 5S_2 5S_2 58 0.985 - - - - - - - - - 0.985
12. RTN4R ENSGALG00000007732 1515 0.985 - - - - - - - - - 0.985 reticulon 4 receptor
13. ZNF6 ZNF6 138 0.984 - - - - - - - - - 0.984
14. CPNE2 ENSGALG00000001316 236 0.984 - - - - - - - - - 0.984 copine 2 [Source:NCBI gene;Acc:415646]
15. PM20D2 ENSGALG00000015779 1301 0.984 - - - - - - - - - 0.984 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
16. MTSS1 ENSGALG00000041969 1312 0.984 - - - - - - - - - 0.984 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
17. CXADR ENSGALG00000015701 96 0.984 - - - - - - - - - 0.984 coxsackie virus and adenovirus receptor, transcript variant X2
18. SSH1 ENSGALG00000004928 222 0.983 - - - - - - - - - 0.983 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
19. HAUS8 ENSGALG00000003727 351 0.983 - - - - - - - - - 0.983 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
20. APBA3 ENSGALG00000000740 1249 0.983 - - - - - - - - - 0.983 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
21. MSI1 ENSGALG00000007227 2279 0.983 - - - - - - - - - 0.983 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
22. DIAPH3 ENSGALG00000016937 1069 0.983 - - - - - - - - - 0.983 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
23. CASKIN1 604 0.982 - - - - - - - - - 0.982 CASK interacting protein 1, transcript variant X4
24. ITSN2 ENSGALG00000016504 651 0.982 - - - - - - - - - 0.982 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
25. WDSUB1 ENSGALG00000012574 2038 0.981 - - - - - - - - - 0.981 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
26. FASTKD3 ENSGALG00000033521 1186 0.981 - - - - - - - - - 0.981 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
27. AGGF1 ENSGALG00000004311 3011 0.981 - - - - - - - - - 0.981 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
28. BRD1 ENSGALG00000029379 6047 0.98 - - - - - - - - - 0.980 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
29. ARHGAP21 ENSGALG00000007721 3961 0.979 - - - - - - - - - 0.979 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
30. ITGA9 ENSGALG00000029378 415 0.979 - - - - - - - - - 0.979 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
31. ENSGALG00000005389 ENSGALG00000005389 553 0.979 - - - - - - - - - 0.979
32. FSTL4 ENSGALG00000031487 529 0.978 - - - - - - - - - 0.978 follistatin like 4 [Source:NCBI gene;Acc:395163]
33. PCLO 249 0.978 - - - - - - - - - 0.978 piccolo presynaptic cytomatrix protein
34. PREX2 ENSGALG00000042354 134 0.978 - - - - - - - - - 0.978 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
35. HYAL3 ENSGALG00000029000 712 0.978 - - - - - - - - - 0.978 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
36. TP53BP1 ENSGALG00000042201 708 0.977 - - - - - - - - - 0.977 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
37. CRYM ENSGALG00000002484 3558 0.977 - - - - - - - - - 0.977 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
38. C10orf118 C10orf118 762 0.977 - - - - - - - - - 0.977
39. PTX3 ENSGALG00000028284 2984 0.976 - - - - - - - - - 0.976 pentraxin 3 [Source:NCBI gene;Acc:548626]
40. ARPC1B ENSGALG00000032588 2407 0.975 - - - - - - - - - 0.975 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
41. SGSH ENSGALG00000007027 1115 0.975 - - - - - - - - - 0.975 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
42. LRRN4 ENSGALG00000008815 481 0.975 - - - - - - - - - 0.975 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
43. WHSC1 1712 0.975 - - - - - - - - - 0.975 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
44. CDH1-A CDH1-A 343 0.975 - - - - - - - - - 0.975
45. C14orf80 C14orf80 1921 0.975 - - - - - - - - - 0.975
46. CPNE1 ENSGALG00000040856 610 0.975 - - - - - - - - - 0.975 copine 1 [Source:NCBI gene;Acc:419134]
47. SLC39A13 ENSGALG00000008122 2003 0.974 - - - - - - - - - 0.974 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
48. FBXO21 ENSGALG00000008201 2608 0.974 - - - - - - - - - 0.974 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
49. GRK4 ENSGALG00000015645 1065 0.974 - - - - - - - - - 0.974 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
50. FAM129A ENSGALG00000004812 269 0.974 - - - - - - - - - 0.974 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
51. MYH1D ENSGALG00000027323 365 0.974 - - - - - - - - - 0.974 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
52. NARS ENSGALG00000040506 9506 0.974 - - - - - - - - - 0.974 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
53. MRPL50 ENSGALG00000015543 11649 0.974 - - - - - - - - - 0.974 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
54. FRMD3 ENSGALG00000012577 999 0.974 - - - - - - - - - 0.974 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
55. PLA2G15 ENSGALG00000041787 762 0.974 - - - - - - - - - 0.974 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
56. CPT2 ENSGALG00000010681 3211 0.973 - - - - - - - - - 0.973 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
57. INTS10 ENSGALG00000010130 6320 0.973 - - - - - - - - - 0.973 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
58. MGA 1911 0.973 - - - - - - - - - 0.973 MGA, MAX dimerization protein, transcript variant X15
59. SSR2 ENSGALG00000000764 32190 0.973 - - - - - - - - - 0.973 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
60. ESRRG ENSGALG00000009645 2783 0.973 - - - - - - - - - 0.973 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
61. MPRIP ENSGALG00000004798 6700 0.973 - - - - - - - - - 0.973 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
62. TANGO2 ENSGALG00000002056 1971 0.972 - - - - - - - - - 0.972 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
63. HEXA ENSGALG00000043828 4789 0.971 - - - - - - - - - 0.971 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
64. GRTP1 ENSGALG00000016828 3145 0.971 - - - - - - - - - 0.971 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
65. TMEM237 ENSGALG00000008381 1317 0.971 - - - - - - - - - 0.971 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
66. TMEM130 ENSGALG00000003569 949 0.971 - - - - - - - - - 0.971 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
67. CCT8 ENSGALG00000015821 12161 0.971 - - - - - - - - - 0.971 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
68. ACADL ENSGALG00000002891 8058 0.97 - - - - - - - - - 0.970 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
69. GXYLT1 ENSGALG00000009532 5682 0.97 - - - - - - - - - 0.970 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
70. TBC1D19 ENSGALG00000029673 1868 0.97 - - - - - - - - - 0.970 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
71. FREM3 ENSGALG00000020561 1824 0.97 - - - - - - - - - 0.970 FRAS1 related extracellular matrix 3
72. KLHL7 ENSGALG00000010938 528 0.97 - - - - - - - - - 0.970 kelch like family member 7 [Source:NCBI gene;Acc:420612]
73. HOTAIRM1 HOTAIRM1 4335 0.969 - - - - - - - - - 0.969
74. RNF219 ENSGALG00000016911 4458 0.968 - - - - - - - - - 0.968 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
75. CCDC88A ENSGALG00000043587 2208 0.968 - - - - - - - - - 0.968 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
76. ASB3 ENSGALG00000008176 5422 0.968 - - - - - - - - - 0.968 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
77. ERI2 1087 0.968 - - - - - - - - - 0.968 ERI1 exoribonuclease family member 2, transcript variant X1
78. ASAP2 ENSGALG00000016419 1393 0.967 - - - - - - - - - 0.967 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
79. OSBPL1A ENSGALG00000015086 2702 0.967 - - - - - - - - - 0.967 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
80. CCDC51 ENSGALG00000006465 1845 0.966 - - - - - - - - - 0.966 coiled-coil domain containing 51, transcript variant X1
81. SPTSSA ENSGALG00000025755 3361 0.966 - - - - - - - - - 0.966 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
82. ZFR ENSGALG00000003235 8466 0.965 - - - - - - - - - 0.965 zinc finger RNA binding protein, transcript variant X3
83. RHOT1 ENSGALG00000003397 5149 0.964 - - - - - - - - - 0.964 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
84. PPM1E ENSGALG00000005061 2606 0.964 - - - - - - - - - 0.964 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
85. SMC6 ENSGALG00000016467 3321 0.964 - - - - - - - - - 0.964 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
86. ANKRD17 ENSGALG00000011642 3192 0.963 - - - - - - - - - 0.963 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
87. EMP2 ENSGALG00000027058 3925 0.963 - - - - - - - - - 0.963 epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
88. TMEM243 ENSGALG00000006633 1592 0.963 - - - - - - - - - 0.963 transmembrane protein 243 [Source:HGNC Symbol;Acc:HGNC:21707]
89. FBXO25 ENSGALG00000016359 1547 0.963 - - - - - - - - - 0.963 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
90. RWDD2B ENSGALG00000015807 3601 0.963 - - - - - - - - - 0.963 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
91. CKAP2 ENSGALG00000017025 25020 0.963 - - - - - - - - - 0.963 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
92. SPDL1 ENSGALG00000001942 4403 0.962 - - - - - - - - - 0.962 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
93. MPP5 ENSGALG00000009581 724 0.961 - - - - - - - - - 0.961 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
94. LAMP2 ENSGALG00000008572 198 0.961 - - - - - - - - - 0.961 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
95. FBLIM1 ENSGALG00000003636 1498 0.961 - - - - - - - - - 0.961 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
96. RSPO2 ENSGALG00000030030 1271 0.961 - - - - - - - - - 0.961 R-spondin 2 [Source:NCBI gene;Acc:420271]
97. SLC35B1 ENSGALG00000035057 10683 0.961 - - - - - - - - - 0.961 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
98. UQCR11 ENSGALG00000001096 25245 0.961 - - - - - - - - - 0.961 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
99. MB21D1 2460 0.961 - - - - - - - - - 0.961 Mab-21 domain containing 1
100. CETN1 ENSGALG00000026741 7243 0.96 - - - - - - - - - 0.960 centrin 1 [Source:NCBI gene;Acc:422668]

There are 561 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA