Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDPK1

Gene Name Gene ID Reads Annotation
PDPK1 ENSGALG00000006418 13412 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]











Genes with expression patterns similar to PDPK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDPK1 ENSGALG00000006418 13412 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
2. CXXC5 ENSGALG00000000884 16351 1.697 - - 0.798 - - - 0.899 - - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
3. ZNF451 ENSGALG00000016282 3380 1.636 - - 0.884 - - - - 0.752 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
4. THOC2 ENSGALG00000008507 9501 1.602 - - 0.759 - - - - 0.843 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
5. HOXA7 ENSGALG00000026989 6746 1.602 - - 0.841 - - - 0.761 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
6. LPCAT3 ENSGALG00000014570 7919 1.596 - - 0.840 - - - 0.756 - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
7. GID8 ENSGALG00000005700 3992 1.579 - - 0.799 - - - - - 0.780 - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
8. MRPS9 ENSGALG00000016794 5875 1.573 - - - - - - 0.781 0.792 - - mitochondrial ribosomal protein S9 [Source:NCBI gene;Acc:418723]
9. TYW3 ENSGALG00000032549 4869 1.561 - - 0.820 - - - - 0.741 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
10. ELOVL5 ENSGALG00000016314 18163 1.56 - - 0.777 - - - 0.783 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
11. HCFC2 ENSGALG00000029616 4525 1.544 - - 0.830 - - - 0.714 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
12. HMGN1 ENSGALG00000016067 17375 1.544 - - 0.772 - - - 0.772 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
13. ZNF639 ENSGALG00000005944 6387 1.532 - - 0.830 - - - 0.702 - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
14. PSMB2 ENSGALG00000026421 51885 1.531 - - 0.792 - - - 0.739 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
15. ZCCHC8 ENSGALG00000004486 3201 1.513 - - 0.772 - - - 0.741 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
16. PPID ENSGALG00000009451 7529 1.511 - - 0.783 - - - 0.728 - - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
17. SPDL1 ENSGALG00000001942 4403 1.5 - - 0.745 - - - - - 0.755 - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
18. EWSR1 ENSGALG00000008149 13014 1.5 - - - - - - 0.716 0.784 - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
19. SUCLG2 ENSGALG00000007652 9688 1.488 - - 0.754 - - - - 0.734 - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
20. MTAP ENSGALG00000008174 10976 1.477 - - 0.718 - - - 0.759 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
21. RAP1A ENSGALG00000001476 5287 1.468 - - - - - - 0.721 0.747 - - RAP1A, member of RAS oncogene family
22. TXN2 ENSGALG00000012532 12518 1.468 - - 0.752 - - - 0.716 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
23. GTF2H5 ENSGALG00000013733 12293 1.457 - - 0.747 - - - 0.710 - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
24. ROCK1 ENSGALG00000014922 4020 1.452 - - 0.722 - - - 0.730 - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
25. ST14 ENSGALG00000001331 1655 0.934 - - 0.934 - - - - - - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
26. GFER ENSGALG00000005579 1367 0.901 - - 0.901 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
27. FBN1 ENSGALG00000004960 2130 0.901 - - 0.901 - - - - - - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
28. PCYT1B 190 0.901 - - 0.901 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
29. GGT7 ENSGALG00000001062 476 0.899 - - 0.899 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
30. ATF7IP ENSGALG00000011814 1571 0.898 - - 0.898 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
31. CHAMP1 ENSGALG00000016813 508 0.898 - - 0.898 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
32. TCTN2 ENSGALG00000023683 3596 0.896 - - 0.896 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
33. VPS13D ENSGALG00000034777 2350 0.896 - - 0.896 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
34. LMNB2 ENSGALG00000000470 4364 0.896 - - 0.896 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
35. SOBP ENSGALG00000043047 147 0.895 - - 0.895 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
36. PDIA5 ENSGALG00000011689 6913 0.895 - - 0.895 - - - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
37. GCC2 ENSGALG00000016806 1085 0.895 - - 0.895 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
38. GTF2H2 ENSGALG00000002399 2361 0.894 - - 0.894 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
39. RALGDS ENSGALG00000003412 4478 0.894 - - 0.894 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
40. SEC22B ENSGALG00000039704 16080 0.893 - - 0.893 - - - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
41. ITM2B ENSGALG00000016996 1112 0.892 - - 0.892 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
42. CHALK5 CHALK5 1351 0.891 - - 0.891 - - - - - - -
43. MLLT3 ENSGALG00000015078 502 0.89 - - 0.890 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
44. AKAP10 ENSGALG00000004679 103 0.89 - - 0.890 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. MED12 ENSGALG00000036322 814 0.889 - - 0.889 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
46. CDC14B ENSGALG00000012627 110 0.889 - - 0.889 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
47. TTPAL ENSGALG00000004244 2734 0.889 - - 0.889 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
48. RECQL ENSGALG00000013174 1323 0.887 - - 0.887 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
49. ITGB4 ENSGALG00000002389 44 0.886 - - 0.886 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
50. TDRD6 48 0.886 - - 0.886 - - - - - - - tudor domain containing 6
51. RQCD1 RQCD1 110 0.886 - - 0.886 - - - - - - -
52. UEVLD ENSGALG00000006342 164 0.886 - - 0.886 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
53. UBN1 ENSGALG00000031416 2848 0.886 - - 0.886 - - - - - - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
54. FBXL5 ENSGALG00000014510 245 0.886 - - 0.886 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
55. ENSGALG00000028964 ENSGALG00000028964 46 0.886 - - 0.886 - - - - - - -
56. MRC2 ENSGALG00000000461 48 0.886 - - 0.886 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
57. IFT81 ENSGALG00000003854 2534 0.885 - - 0.885 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
58. SLC3A1 ENSGALG00000009973 608 0.885 - - 0.885 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
59. ATP10D ENSGALG00000014192 94 0.885 - - 0.885 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
60. ENSGALG00000004703 ENSGALG00000004703 112 0.884 - - 0.884 - - - - - - -
61. ENSGALG00000002020 ENSGALG00000002020 183 0.884 - - 0.884 - - - - - - -
62. NUPL1 NUPL1 8197 0.884 - - 0.884 - - - - - - -
63. SMAD1 ENSGALG00000009977 3540 0.884 - - 0.884 - - - - - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
64. SZT2 ENSGALG00000028561 255 0.883 - - 0.883 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
65. OSGIN2 ENSGALG00000042840 83 0.883 - - 0.883 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
66. PCDH17 ENSGALG00000016941 1006 0.883 - - 0.883 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
67. ENSGALG00000020103 ENSGALG00000020103 64 0.883 - - 0.883 - - - - - - -
68. LRRC71 ENSGALG00000027351 695 0.883 - - 0.883 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
69. KCTD3 ENSGALG00000009678 335 0.882 - - 0.882 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
70. RPS6KB1 ENSGALG00000005198 169 0.882 - - 0.882 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
71. MIB1 ENSGALG00000014974 3583 0.882 - - 0.882 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
72. CLEC16A ENSGALG00000007167 66 0.882 - - 0.882 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
73. DBN1 ENSGALG00000033405 216 0.882 - - 0.882 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
74. WDR92 ENSGALG00000008760 3934 0.881 - - 0.881 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
75. FAM134C 860 0.881 - - 0.881 - - - - - - - family with sequence similarity 134 member C
76. GORAB ENSGALG00000003329 1958 0.881 - - 0.881 - - - - - - - golgin, RAB6 interacting [Source:HGNC Symbol;Acc:HGNC:25676]
77. PTDSS2 ENSGALG00000004300 682 0.881 - - 0.881 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
78. F2R ENSGALG00000014983 106 0.881 - - 0.881 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
79. L3MBTL3 ENSGALG00000034030 113 0.881 - - 0.881 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
80. BBS5 ENSGALG00000009846 344 0.881 - - 0.881 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
81. U4 U4 69 0.881 - - 0.881 - - - - - - -
82. LRRC42 ENSGALG00000010743 384 0.881 - - 0.881 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
83. ACTR8 ENSGALG00000005385 3647 0.879 - - 0.879 - - - - - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
84. PCYOX1 ENSGALG00000013878 2200 0.879 - - 0.879 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
85. TUBA4A ENSGALG00000000433 1367 0.879 - - 0.879 - - - - - - - tubulin alpha 4a
86. PRUNE PRUNE 452 0.879 - - 0.879 - - - - - - -
87. AKT3 ENSGALG00000034081 866 0.879 - - 0.879 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
88. RAD54L2 ENSGALG00000003243 187 0.879 - - 0.879 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
89. AMFR ENSGALG00000003107 6560 0.879 - - 0.879 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
90. WHSC1 1712 0.879 - - 0.879 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
91. SMARCAD1 ENSGALG00000037339 149 0.878 - - 0.878 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
92. NXPE3 ENSGALG00000015344 111 0.878 - - 0.878 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
93. GDPD4 ENSGALG00000000690 824 0.878 - - 0.878 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
94. TRIM13 ENSGALG00000017011 92 0.877 - - 0.877 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
95. AMBRA1 ENSGALG00000008358 2865 0.877 - - 0.877 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
96. ABCC3 ENSGALG00000007522 340 0.876 - - 0.876 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
97. AASDHPPT ENSGALG00000027981 1017 0.876 - - 0.876 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
98. DARS2 ENSGALG00000023749 2386 0.876 - - 0.876 - - - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
99. TMEM242 ENSGALG00000013689 377 0.875 - - 0.875 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
100. CEP104 ENSGALG00000000978 1130 0.875 - - 0.875 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]

There are 575 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA