Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDP1

Gene Name Gene ID Reads Annotation
PDP1 ENSGALG00000034876 2965 pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]











Genes with expression patterns similar to PDP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDP1 ENSGALG00000034876 2965 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
2. MRM1 ENSGALG00000039523 2009 2.286 - - - - - - 0.865 0.716 0.705 - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
3. FDFT1 ENSGALG00000016665 3053 1.612 - - - - - - 0.847 - 0.765 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
4. RAD17 ENSGALG00000015571 1374 1.591 - - - - - - 0.858 - 0.733 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
5. GNMT ENSGALG00000043290 3288 1.584 - - - - - - 0.842 - 0.742 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
6. ENSGALG00000026433 ENSGALG00000026433 14463 1.543 - - - - - - 0.808 0.735 - -
7. COX20 ENSGALG00000027440 5881 0.942 - - - - - - 0.942 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
8. NEK7 ENSGALG00000002216 4532 0.94 - - - - - - 0.940 - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
9. USP5 ENSGALG00000014525 21883 0.93 - - - - - - 0.930 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
10. C9orf85 ENSGALG00000026001 4110 0.924 - - - - - - 0.924 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
11. DDX42 ENSGALG00000000581 8780 0.92 - - - - - - 0.920 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
12. ZC3H7A ENSGALG00000003143 7114 0.918 - - - - - - 0.918 - - - zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:HGNC:30959]
13. COMMD5 ENSGALG00000008867 12173 0.912 - - - - - - 0.912 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
14. TMEM14A ENSGALG00000019894 5279 0.911 - - - - - - 0.911 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
15. CASP6 ENSGALG00000012186 6639 0.911 - - - - - - 0.911 - - - caspase 6 [Source:NCBI gene;Acc:395477]
16. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.91 - - - - - - 0.910 - - -
17. PWP1 ENSGALG00000012631 10536 0.909 - - - - - - 0.909 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
18. ZER1 ENSGALG00000004659 1635 0.907 - - - - - - 0.907 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
19. RHOT2 ENSGALG00000002497 1744 0.905 - - - - - - 0.905 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
20. CCDC132 CCDC132 2632 0.904 - - - - - - 0.904 - - -
21. BAG4 ENSGALG00000003254 5751 0.903 - - - - - - 0.903 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
22. SALL1 ENSGALG00000039238 3740 0.903 - - - - - - 0.903 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
23. PITPNB ENSGALG00000005654 21578 0.901 - - - - - - 0.901 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
24. DECR1 ENSGALG00000036990 6360 0.901 - - - - - - 0.901 - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
25. C12orf66 ENSGALG00000027682 2110 0.901 - - - - - - 0.901 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
26. TSPAN13 ENSGALG00000027240 8999 0.9 - - - - - - 0.900 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
27. XPR1 ENSGALG00000003893 5642 0.899 - - - - - - 0.899 - - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
28. OSBPL8 ENSGALG00000010246 4565 0.898 - - - - - - 0.898 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
29. USP47 ENSGALG00000005569 4813 0.897 - - - - - - 0.897 - - - ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
30. FOXK2 ENSGALG00000001577 6346 0.895 - - - - - - 0.895 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
31. ARL6IP4 ENSGALG00000003682 2467 0.895 - - - - - - 0.895 - - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
32. CDC16 ENSGALG00000016816 2162 0.895 - - - - - - 0.895 - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
33. MYEOV2 MYEOV2 5155 0.895 - - - - - - 0.895 - - -
34. TBC1D12 ENSGALG00000034044 5588 0.894 - - - - - - 0.894 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
35. DLAT ENSGALG00000007904 3297 0.894 - - - - - - 0.894 - - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
36. TIRAP ENSGALG00000040224 2578 0.893 - - - - - - 0.893 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
37. QSER1 ENSGALG00000012030 4490 0.892 - - - - - - 0.892 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
38. COG4 ENSGALG00000002603 4485 0.891 - - - - - - 0.891 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
39. BUD13_1 ENSGALG00000025882 1118 0.89 - - - - - - 0.890 - - - BUD13 homolog [Source:NCBI gene;Acc:428248]
40. C11H19ORF12 C11H19ORF12 5149 0.889 - - - - - - 0.889 - - -
41. UXS1 ENSGALG00000016801 3724 0.888 - - - - - - 0.888 - - - UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
42. LYRM4 ENSGALG00000027339 2917 0.888 - - - - - - 0.888 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
43. ZCCHC8 ENSGALG00000004486 3201 0.887 - - - - - - 0.887 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
44. MLLT10 ENSGALG00000007928 4022 0.886 - - - - - - 0.886 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
45. PLEKHA5 ENSGALG00000013134 3656 0.885 - - - - - - 0.885 - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
46. C1GALT1 ENSGALG00000009752 7148 0.885 - - - - - - 0.885 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
47. RHOT1 ENSGALG00000003397 5149 0.885 - - - - - - 0.885 - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
48. TMA16 ENSGALG00000009501 6651 0.884 - - - - - - 0.884 - - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
49. IFT52 ENSGALG00000003523 1858 0.884 - - - - - - 0.884 - - - intraflagellar transport 52 [Source:NCBI gene;Acc:419165]
50. ANXA11 ENSGALG00000043826 5189 0.883 - - - - - - 0.883 - - - annexin A11 [Source:NCBI gene;Acc:423637]
51. PPIL2 ENSGALG00000042052 4349 0.882 - - - - - - 0.882 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
52. ZBTB26 ENSGALG00000042762 1920 0.881 - - - - - - 0.881 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
53. NIPSNAP3L ENSGALG00000027334 7514 0.88 - - - - - - 0.880 - - - nipsnap homolog 3-like
54. DNTTIP2 4528 0.88 - - - - - - 0.880 - - - deoxynucleotidyltransferase, terminal, interacting protein 2, transcript variant X3
55. C7orf50 ENSGALG00000004055 5786 0.88 - - - - - - 0.880 - - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
56. QRICH1 ENSGALG00000006867 2031 0.879 - - - - - - 0.879 - - - glutamine rich 1 [Source:NCBI gene;Acc:100858758]
57. TRDMT1 ENSGALG00000008686 2663 0.879 - - - - - - 0.879 - - - tRNA aspartic acid methyltransferase 1 [Source:NCBI gene;Acc:420520]
58. SLC6A15 ENSGALG00000010992 2837 0.879 - - - - - - 0.879 - - - solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]
59. RNF144A ENSGALG00000028709 2855 0.878 - - - - - - 0.878 - - - ring finger protein 144A, transcript variant X1
60. SMYD4 ENSGALG00000003031 2362 0.878 - - - - - - 0.878 - - - SET and MYND domain containing 4 [Source:NCBI gene;Acc:417562]
61. MRPL23 ENSGALG00000006561 13737 0.878 - - - - - - 0.878 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
62. RFFL ENSGALG00000002225 928 0.877 - - - - - - 0.877 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
63. TMEM129 ENSGALG00000015710 1519 0.876 - - - - - - 0.876 - - - transmembrane protein 129 [Source:NCBI gene;Acc:422900]
64. EML1 1941 0.876 - - - - - - 0.876 - - - echinoderm microtubule associated protein like 1, transcript variant X11
65. UFL1 ENSGALG00000015580 3845 0.876 - - - - - - 0.876 - - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
66. TUFT1 ENSGALG00000032955 1317 0.874 - - - - - - 0.874 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
67. LMBRD1 ENSGALG00000016174 3469 0.873 - - - - - - 0.873 - - - LMBR1 domain containing 1 [Source:NCBI gene;Acc:421874]
68. STX8 ENSGALG00000001238 7403 0.872 - - - - - - 0.872 - - - syntaxin 8 [Source:NCBI gene;Acc:417321]
69. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 0.871 - - - - - - 0.871 - - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
70. WWC3 ENSGALG00000034834 9392 0.871 - - - - - - 0.871 - - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
71. WDR12 ENSGALG00000008470 7654 0.871 - - - - - - 0.871 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
72. SDK1 ENSGALG00000004420 571 0.87 - - - - - - 0.870 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
73. TBPL1 ENSGALG00000013981 3710 0.87 - - - - - - 0.870 - - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
74. GADD45 GADD45 8780 0.87 - - - - - - 0.870 - - -
75. FBXO28 ENSGALG00000009331 2871 0.87 - - - - - - 0.870 - - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
76. CCDC53 CCDC53 3732 0.869 - - - - - - 0.869 - - -
77. SLAIN2 ENSGALG00000014115 1292 0.869 - - - - - - 0.869 - - - SLAIN motif family member 2 [Source:HGNC Symbol;Acc:HGNC:29282]
78. ARL5A ENSGALG00000041099 4592 0.868 - - - - - - 0.868 - - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
79. PYCR1 ENSGALG00000007300 7987 0.868 - - - - - - 0.868 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
80. TTI1 ENSGALG00000006791 1218 0.868 - - - - - - 0.868 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
81. ACTR10 ENSGALG00000012041 2752 0.868 - - - - - - 0.868 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
82. FREM3 ENSGALG00000020561 1824 0.867 - - - - - - 0.867 - - - FRAS1 related extracellular matrix 3
83. BEND5 ENSGALG00000010505 3298 0.866 - - - - - - 0.866 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
84. FBXW7 ENSGALG00000010103 5982 0.866 - - - - - - 0.866 - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
85. EFNB1 ENSGALG00000036539 2706 0.866 - - - - - - 0.866 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
86. TRNT1 ENSGALG00000017368 11932 0.865 - - - - - - 0.865 - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
87. PRDM10 632 0.865 - - - - - - 0.865 - - - PR domain 10, transcript variant X10
88. NNT ENSGALG00000014869 8496 0.865 - - - - - - 0.865 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
89. CINP ENSGALG00000011372 2366 0.864 - - - - - - 0.864 - - - cyclin dependent kinase 2 interacting protein [Source:NCBI gene;Acc:423467]
90. NARFL ENSGALG00000005365 2668 0.864 - - - - - - 0.864 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
91. FAM49B ENSGALG00000036490 7984 0.864 - - - - - - 0.864 - - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
92. CAPN1 ENSGALG00000041685 4011 0.863 - - - - - - 0.863 - - - calpain 1 [Source:NCBI gene;Acc:693249]
93. PANK1 ENSGALG00000006431 2910 0.863 - - - - - - 0.863 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
94. ESCO1 ENSGALG00000014936 739 0.863 - - - - - - 0.863 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
95. ETV5 ENSGALG00000005768 9679 0.862 - - - - - - 0.862 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
96. RIC8B ENSGALG00000029484 6141 0.862 - - - - - - 0.862 - - - RIC8 guanine nucleotide exchange factor B [Source:HGNC Symbol;Acc:HGNC:25555]
97. EPB41L1 ENSGALG00000034171 3616 0.862 - - - - - - 0.862 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
98. GPX8 ENSGALG00000026704 4497 0.862 - - - - - - 0.862 - - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
99. FAM86A FAM86A 1860 0.862 - - - - - - 0.862 - - -
100. AP1AR ENSGALG00000028807 2398 0.862 - - - - - - 0.862 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]

There are 334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA