Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDLIM3

Gene Name Gene ID Reads Annotation
PDLIM3 ENSGALG00000013414 52 PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]











Genes with expression patterns similar to PDLIM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDLIM3 ENSGALG00000013414 52 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
2. DGKQ ENSGALG00000002142 31 1.74 - - - - 0.914 0.826 - - - - diacylglycerol kinase theta [Source:HGNC Symbol;Acc:HGNC:2856]
3. TDRD12 ENSGALG00000004704 19 1.643 - - - - - 0.902 - - - 0.741 tudor domain containing 12, transcript variant X3
4. NPY ENSGALG00000010983 441 1.575 - - - - - - - 0.811 - 0.764 neuropeptide Y [Source:NCBI gene;Acc:396464]
5. COL11A1 ENSGALG00000005180 244 1.444 - - - - - - 0.711 - - 0.733 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
6. MPP4 ENSGALG00000008398 188 1.409 - - - - - - - 0.701 - 0.708 membrane palmitoylated protein 4 [Source:HGNC Symbol;Acc:HGNC:13680]
7. LOC100859850 ENSGALG00000000803 3 1 - - - - - 1.000 - - - - lisH domain-containing protein C1711.05-like
8. SCN3A ENSGALG00000011040 62 1 - - - - - 1.000 - - - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
9. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - - - 1.000 - - - -
10. SORCS2 ENSGALG00000015554 7 1 - - - - - 1.000 - - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
11. ATG14 ENSGALG00000012148 2 1 - - - - - 1.000 - - - - autophagy related 14 [Source:HGNC Symbol;Acc:HGNC:19962]
12. SP5 ENSGALG00000034094 130 1 - - - - - 1.000 - - - - Sp5 transcription factor [Source:NCBI gene;Acc:693261]
13. WDR64 ENSGALG00000010760 1 1 - - - - - 1.000 - - - - WD repeat domain 64 [Source:HGNC Symbol;Acc:HGNC:26570]
14. KLHL12 ENSGALG00000000518 5 1 - - - - - 1.000 - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
15. ENSGALG00000022812 ENSGALG00000022812 0 1 - - - - - 1.000 - - - -
16. TMEM179 ENSGALG00000011590 0 1 - - - - - 1.000 - - - - transmembrane protein 179 [Source:NCBI gene;Acc:423491]
17. D2HGDH ENSGALG00000039535 3 1 - - - - - 1.000 - - - - D-2-hydroxyglutarate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:28358]
18. TRIM42 ENSGALG00000005286 2 1 - - - - - 1.000 - - - - tripartite motif containing 42 [Source:HGNC Symbol;Acc:HGNC:19014]
19. STXBP1 ENSGALG00000040003 157 1 - - - - - 1.000 - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
20. THSD7B ENSGALG00000012362 8 1 - - - - - 1.000 - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
21. TRMT61A ENSGALG00000011522 14 1 - - - - - 1.000 - - - - tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
22. TROJANZ ENSGALG00000027747 37 1 - - - - - 1.000 - - - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
23. ENSGALG00000019428 ENSGALG00000019428 1 1 - - - - - 1.000 - - - -
24. ICOS ENSGALG00000008656 27 1 - - - - - 1.000 - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
25. LRIT3 ENSGALG00000026627 6 1 - - - - - 1.000 - - - - leucine rich repeat, Ig-like and transmembrane domains 3 [Source:HGNC Symbol;Acc:HGNC:24783]
26. DYDC1 ENSGALG00000002432 54 1 - - - - - 1.000 - - - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
27. PAPPA2 40 1 - - - - - 1.000 - - - - pappalysin 2
28. SS2R SS2R 3 1 - - - - - 1.000 - - - -
29. ENSGALG00000016201 ENSGALG00000016201 1 1 - - - - - 1.000 - - - -
30. E2F3 ENSGALG00000012680 21 1 - - - - - 1.000 - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
31. SLC28A3 ENSGALG00000012593 131 1 - - - - - 1.000 - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
32. GJA3 ENSGALG00000017137 0 1 - - - - - 1.000 - - - - gap junction protein alpha 3 [Source:NCBI gene;Acc:428084]
33. FSD2 ENSGALG00000005996 2 1 - - - - - 1.000 - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
34. RASGRP1 ENSGALG00000009740 15 1 - - - - - 1.000 - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
35. DLX6 ENSGALG00000023195 29 1 - - - - - 1.000 - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
36. ENSGALG00000005960 ENSGALG00000005960 3 1 - - - - - 1.000 - - - -
37. ENSGALG00000021838 ENSGALG00000021838 0 1 - - - - - 1.000 - - - -
38. ADRA2C ENSGALG00000015608 42 1 - - - - - 1.000 - - - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
39. ADAMTS7 7 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 7
40. ANKRD44 ENSGALG00000007996 17 1 - - - - - 1.000 - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
41. PHF19 ENSGALG00000001595 1 1 - - - - - 1.000 - - - - PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]
42. FAM109B 1 1 - - - - - 1.000 - - - - family with sequence similarity 109 member B
43. ST6GAL2 ENSGALG00000016803 24 1 - - - - - 1.000 - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
44. ANKRD34B ENSGALG00000044727 9 1 - - - - - 1.000 - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
45. GALNT10 ENSGALG00000004033 3 1 - - - - - 1.000 - - - - polypeptide N-acetylgalactosaminyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19873]
46. KCTD15 ENSGALG00000004907 8 1 - - - - - 1.000 - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
47. IMPG1 ENSGALG00000015897 4 1 - - - - - 1.000 - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
48. STS ENSGALG00000016622 11 1 - - - - - 1.000 - - - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
49. AGBL1 ENSGALG00000006819 7 1 - - - - - 1.000 - - - - ATP/GTP binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:26504]
50. RBP1 ENSGALG00000037875 7 1 - - - - - 1.000 - - - - retinol binding protein 1 [Source:NCBI gene;Acc:424821]
51. LURAP1 ENSGALG00000031467 0 1 - - - - - 1.000 - - - - leucine rich adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:32327]
52. SLCO1B1 ENSGALG00000019276 7 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
53. SLC15A1 ENSGALG00000016884 10 1 - - - - - 1.000 - - - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
54. LOC395381 ENSGALG00000006717 10 1 - - - - - 1.000 - - - - ovomucin, alpha subunit, transcript variant X4
55. ENSGALG00000001694 ENSGALG00000001694 3 1 - - - - - 1.000 - - - -
56. KLF13 ENSGALG00000026590 13 1 - - - - - 1.000 - - - - Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
57. SNORA41 SNORA41 4 1 - - - - - 1.000 - - - -
58. SNTN ENSGALG00000007288 0 1 - - - - - 1.000 - - - - sentan, cilia apical structure protein [Source:NCBI gene;Acc:416076]
59. ENSGALG00000019864 ENSGALG00000019864 4 1 - - - - - 1.000 - - - -
60. IGJ IGJ 26 1 - - - - - 1.000 - - - -
61. PRA1 PRA1 2 1 - - - - - 1.000 - - - -
62. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - 1.000 - - - -
63. PFKFB2 ENSGALG00000001117 2 1 - - - - - 1.000 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
64. CNNM2 ENSGALG00000008160 3 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
65. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - 1.000 - - - -
66. EML5 ENSGALG00000010639 25 1 - - - - - 1.000 - - - - echinoderm microtubule associated protein like 5, transcript variant X1
67. TDRD5 ENSGALG00000033634 40 1 - - - - - 1.000 - - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
68. RBL2 ENSGALG00000003663 10 1 - - - - - 1.000 - - - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
69. MEGF11 ENSGALG00000007631 0 1 - - - - - 1.000 - - - - multiple EGF like domains 11 [Source:HGNC Symbol;Acc:HGNC:29635]
70. GABRA2 ENSGALG00000014206 19 1 - - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
71. GGGT5L ENSGALG00000013762 0 1 - - - - - 1.000 - - - - protein-glutamine gamma-glutamyltransferase 5-like
72. STEAP2 ENSGALG00000009017 10 1 - - - - - 1.000 - - - - STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
73. VPS29L ENSGALG00000005951 31 1 - - - - - 1.000 - - - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
74. SRGN ENSGALG00000004167 77 1 - - - - - 1.000 - - - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
75. LARGE LARGE 3 1 - - - - - 1.000 - - - -
76. KNDC1 ENSGALG00000007007 31 1 - - - - - 1.000 - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
77. KLHL25 ENSGALG00000006826 2 1 - - - - - 1.000 - - - - kelch like family member 25 [Source:HGNC Symbol;Acc:HGNC:25732]
78. SPARCL1 ENSGALG00000010929 10 1 - - - - - 1.000 - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
79. NOX2 NOX2 2 1 - - - - - 1.000 - - - -
80. TTC7B ENSGALG00000010680 4 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
81. TECRL ENSGALG00000038771 126 1 - - - - - 1.000 - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
82. ENSGALG00000023460 ENSGALG00000023460 0 1 - - - - - 1.000 - - - -
83. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - 1.000 - - - -
84. PCGF5 ENSGALG00000006502 2 1 - - - - - 1.000 - - - - polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
85. GAS2L1 ENSGALG00000036731 2 1 - - - - - 1.000 - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
86. ENSGALG00000013912 ENSGALG00000013912 3 1 - - - - - 1.000 - - - -
87. MAPK8IP1 2 1 - - - - - 1.000 - - - - mitogen-activated protein kinase 8 interacting protein 1, transcript variant X1
88. CNTNAP4 ENSGALG00000023179 13 1 - - - - - 1.000 - - - - contactin associated protein like 4
89. SUSD5 ENSGALG00000042289 1 1 - - - - - 1.000 - - - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
90. RNase RNase 15 1 - - - - - 1.000 - - - -
91. CCDC85C 2 1 - - - - - 1.000 - - - - coiled-coil domain containing 85C, transcript variant X1
92. CCDC157 ENSGALG00000007907 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
93. KLHL33 ENSGALG00000027742 18 1 - - - - - 1.000 - - - - kelch like family member 33, transcript variant X2
94. LAG3 ENSGALG00000044449 0 1 - - - - - 1.000 - - - - lymphocyte activating 3, transcript variant X1
95. SCRT2 ENSGALG00000028912 0 1 - - - - - 1.000 - - - - scratch family transcriptional repressor 2 [Source:NCBI gene;Acc:100379662]
96. DPH1 ENSGALG00000003082 5 1 - - - - - 1.000 - - - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
97. PROM2 ENSGALG00000041347 6 1 - - - - - 1.000 - - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
98. TJP3 ENSGALG00000000748 45 0.981 - - - - - - - 0.981 - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
99. SNORA40 SNORA40 12 0.956 - - - - - 0.956 - - - -
100. ENSGALG00000016601 ENSGALG00000016601 16 0.954 - - - - - 0.954 - - - -

There are 203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA