Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDK1

Gene Name Gene ID Reads Annotation
PDK1 ENSGALG00000013235 238 pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]











Genes with expression patterns similar to PDK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDK1 ENSGALG00000013235 238 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]
2. XYLT1 ENSGALG00000006757 169 1.75 - - 0.853 - - - - - - 0.897 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
3. DAB2IP ENSGALG00000001419 100 1.679 - - 0.834 - - - - - - 0.845 DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
4. DNAAF1 ENSGALG00000003258 115 1.637 - - 0.833 - - - - - - 0.804 dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
5. ENSGALG00000026309 ENSGALG00000026309 360 1.551 - - 0.780 - - - - - - 0.771
6. UBE3C ENSGALG00000006461 57 1.547 - - 0.825 - - - - 0.722 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
7. NAV3 ENSGALG00000010311 133 1.469 - - 0.739 - - - - - - 0.730 neuron navigator 3 [Source:NCBI gene;Acc:417869]
8. LANCL3 ENSGALG00000016265 9 0.919 - - - - - - - - - 0.919 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
9. HERPUD1 ENSGALG00000001220 18 0.918 - - - - - - - - - 0.918 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
10. PAG1 ENSGALG00000034188 9 0.917 - - - - - - - - - 0.917 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
11. SIAT7E SIAT7E 13 0.917 - - - - - - - - - 0.917
12. TPCN2 ENSGALG00000007550 10 0.917 - - - - - - - - - 0.917 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
13. FAM160A2 ENSGALG00000003416 23 0.916 - - - - - - - - - 0.916 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
14. IPMK ENSGALG00000002710 40 0.914 - - - - - - - - - 0.914 inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
15. EHD4 ENSGALG00000008950 22 0.913 - - - - - - - - - 0.913 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
16. LPGAT1 ENSGALG00000009848 33 0.912 - - - - - - - - - 0.912 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
17. FAM161A ENSGALG00000008810 36 0.911 - - - - - - - - - 0.911 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
18. FANCA ENSGALG00000000516 250 0.911 - - - - - - - - - 0.911 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
19. RAD54L2 ENSGALG00000003243 187 0.91 - - - - - - - - - 0.910 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
20. AKAP10 ENSGALG00000004679 103 0.909 - - - - - - - - - 0.909 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
21. SCL SCL 69 0.909 - - - - - - - - - 0.909
22. ENSGALG00000009344 ENSGALG00000009344 330 0.908 - - - - - - - - - 0.908
23. S1PR1 ENSGALG00000005208 12 0.908 - - - - - - - - - 0.908 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
24. SP2 ENSGALG00000000233 43 0.908 - - - - - - - - - 0.908 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
25. LONRF2 ENSGALG00000016768 193 0.906 - - - - - - - - - 0.906 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
26. KIAA1644 254 0.903 - - - - - 0.903 - - - - KIAA1644, transcript variant X8
27. PLEKHA1 ENSGALG00000034548 34 0.902 - - - - - - - - - 0.902 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
28. ESYT2 ENSGALG00000006542 111 0.901 - - - - - - - - - 0.901 extended synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:22211]
29. WDR63 ENSGALG00000008696 15 0.9 - - - - - - - - - 0.900 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
30. CCP110 ENSGALG00000006925 59 0.9 - - - - - - - - - 0.900 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
31. CSMD3 ENSGALG00000031578 23 0.897 - - - - - - - - - 0.897 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
32. JAG1 ENSGALG00000009020 25 0.897 - - - - - - - - - 0.897 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
33. EPC1 ENSGALG00000007169 101 0.896 - - - - - - - - - 0.896 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
34. C22orf39 ENSGALG00000044654 1364 0.895 - - - - - - - - - 0.895 chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
35. VPS13B 2293 0.893 - - - - - - - - - 0.893 vacuolar protein sorting 13 homolog B
36. WARS ENSGALG00000011228 193 0.892 - - - - - - - - - 0.892 tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
37. GAA ENSGALG00000038853 158 0.892 - - - - - - - - - 0.892 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
38. FER1L6 ENSGALG00000033783 196 0.891 - - - - - - - - - 0.891 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
39. ATP6AP2 ENSGALG00000016241 257 0.891 - - - - - - - - - 0.891 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
40. GLRX ENSGALG00000027483 217 0.888 - - - - - - - - - 0.888 glutaredoxin [Source:NCBI gene;Acc:396069]
41. PRTFDC1 ENSGALG00000007694 111 0.888 - - - - - - - - - 0.888 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
42. CSRP3 ENSGALG00000004044 456 0.887 - - - - - - - - - 0.887 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
43. ETNPPL ENSGALG00000034741 39 0.887 - - - - - - - - - 0.887 ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
44. POLR3B ENSGALG00000012655 704 0.884 - - - - - - - - - 0.884 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
45. CSGALNACT2 ENSGALG00000002543 138 0.884 - - - - - - - - - 0.884 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24292]
46. ARHGAP42 ENSGALG00000017196 240 0.881 - - - - - - - - - 0.881 Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:HGNC:26545]
47. DARS2 ENSGALG00000023749 2386 0.88 - - - - - - - - - 0.880 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
48. NBEAL1 ENSGALG00000008786 104 0.878 - - - - - - - - - 0.878 neurobeachin like 1 [Source:HGNC Symbol;Acc:HGNC:20681]
49. ACSF3 ENSGALG00000035225 261 0.878 - - - - - - - - - 0.878 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
50. CSMD2 ENSGALG00000030229 716 0.877 - - - - - - - - - 0.877 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
51. PRODH ENSGALG00000007728 1659 0.876 - - - - - - - - - 0.876 proline dehydrogenase 1
52. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.876 - - - - - - - - - 0.876
53. OSBPL9 ENSGALG00000010555 395 0.875 - - - - - - - - - 0.875 oxysterol binding protein like 9 [Source:HGNC Symbol;Acc:HGNC:16386]
54. MCMBP ENSGALG00000009455 90 0.874 - - - - - - - - - 0.874 minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
55. HNF4G ENSGALG00000042621 484 0.874 - - 0.874 - - - - - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
56. RIT1 ENSGALG00000014647 7174 0.872 - - - - - - - - - 0.872 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
57. ZNF839 ENSGALG00000011368 148 0.871 - - - - - - - - - 0.871 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
58. C1orf131 C1orf131 141 0.87 - - 0.870 - - - - - - -
59. TMEM242 ENSGALG00000013689 377 0.87 - - - - - - - - - 0.870 transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
60. PIK3R3 ENSGALG00000010335 374 0.87 - - - - - - - - - 0.870 phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
61. ZNF330 ENSGALG00000009868 257 0.869 - - - - - - - - - 0.869 zinc finger protein 330 [Source:NCBI gene;Acc:422453]
62. MRVI1 ENSGALG00000005632 450 0.867 - - - - - - - - - 0.867 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
63. LOXL1 ENSGALG00000028247 672 0.866 - - 0.866 - - - - - - - lysyl oxidase like 1
64. PRKCZ ENSGALG00000001270 12 0.866 - - 0.866 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
65. KLHL5 ENSGALG00000031388 2461 0.864 - - - - - - - - - 0.864 kelch like family member 5 [Source:HGNC Symbol;Acc:HGNC:6356]
66. WNK4 ENSGALG00000032191 962 0.863 - - - - - - - - - 0.863 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
67. TCF20 ENSGALG00000011878 69 0.863 - - - - - - - - - 0.863 transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
68. RACGAP1L ENSGALG00000011252 664 0.863 - - - - - - - - - 0.863 rac GTPase-activating protein 1-like
69. UBAC1 ENSGALG00000042564 598 0.862 - - - - - - - - - 0.862 UBA domain containing 1 [Source:NCBI gene;Acc:427754]
70. LRRC56 ENSGALG00000041955 16 0.862 - - 0.862 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
71. APBA1 ENSGALG00000015111 261 0.862 - - - - - - - - - 0.862 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]
72. PLCG2 ENSGALG00000033507 348 0.861 - - - - - - - - - 0.861 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
73. OSTM1 ENSGALG00000015306 192 0.859 - - - - - - - - - 0.859 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
74. NEK3 ENSGALG00000017024 696 0.858 - - - - - - - - - 0.858 NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
75. ZBTB21 ENSGALG00000016147 13 0.857 - - 0.857 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
76. IKBIP ENSGALG00000026284 31 0.857 - - 0.857 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
77. HVCN1 ENSGALG00000004562 2550 0.856 - - - - - - - - - 0.856 hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
78. LHX6 ENSGALG00000001347 7 0.856 - - 0.856 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
79. SPTSSBL ENSGALG00000026131 70 0.856 - - 0.856 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
80. GTF3C6 ENSGALG00000015044 112 0.856 - - - - - - - - - 0.856 general transcription factor IIIC subunit 6 [Source:NCBI gene;Acc:421754]
81. ANKRD42 8 0.856 - - 0.856 - - - - - - - ankyrin repeat domain 42
82. HOXA9 ENSGALG00000028983 9298 0.855 - - 0.855 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
83. ANKS6 ENSGALG00000013196 215 0.855 - - - - - - - - - 0.855 ankyrin repeat and sterile alpha motif domain containing 6 [Source:HGNC Symbol;Acc:HGNC:26724]
84. GPR180 ENSGALG00000016897 1545 0.854 - - - - - - - - - 0.854 G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
85. IFT172 ENSGALG00000016509 1226 0.854 - - - - - - - - - 0.854 intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
86. PIGV ENSGALG00000039883 32 0.854 - - - - - - - - - 0.854 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
87. PSMD4 ENSGALG00000028505 16 0.854 - - 0.854 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
88. TLN1 ENSGALG00000002548 489 0.853 - - - - - - - - - 0.853 talin 1 [Source:NCBI gene;Acc:395194]
89. ENSGALG00000000407 ENSGALG00000000407 32 0.853 - - 0.853 - - - - - - -
90. DNAH7 ENSGALG00000007841 32 0.851 - - 0.851 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
91. PLAG1 ENSGALG00000015407 17 0.851 - - 0.851 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
92. SCAF4 ENSGALG00000033965 2027 0.851 - - - - - - - - - 0.851 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
93. ENSGALG00000026975 ENSGALG00000026975 8 0.85 - - 0.850 - - - - - - -
94. RFX3 ENSGALG00000010179 305 0.849 - - - - - - - - - 0.849 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
95. RNF126 ENSGALG00000042948 4724 0.849 - - - - - - - - - 0.849 ring finger protein 126 [Source:NCBI gene;Acc:420085]
96. RFESD ENSGALG00000014673 198 0.848 - - - - - - - - - 0.848 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
97. ADC ADC 178 0.848 - - - - - - - - - 0.848
98. DENND4A ENSGALG00000041403 57 0.847 - - - - - - - - - 0.847 DENN domain containing 4A [Source:HGNC Symbol;Acc:HGNC:24321]
99. SLC25A46 ENSGALG00000000253 226 0.846 - - 0.846 - - - - - - - solute carrier family 25 member 46 [Source:NCBI gene;Acc:415610]
100. YDJC ENSGALG00000029198 14 0.845 - - 0.845 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]

There are 268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA