Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PDHB

Gene Name Gene ID Reads Annotation
PDHB ENSGALG00000029576 12254 pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]











Genes with expression patterns similar to PDHB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDHB ENSGALG00000029576 12254 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
2. CHD4 ENSGALG00000013565 25695 1.887 - - - - 0.970 - - 0.917 - - chromodomain helicase DNA binding protein 4
3. RNFT1 ENSGALG00000005205 2888 1.826 - - - - - - 0.838 0.988 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
4. CTSL2 CTSL2 7966 1.8 - - - - 0.955 - 0.845 - - -
5. CDCA7 ENSGALG00000040833 7484 1.794 - - - - - - 0.801 0.993 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
6. GLI2 ENSGALG00000011630 3347 1.786 - - - - 0.972 - 0.814 - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
7. TMEM126A ENSGALG00000014066 6149 1.763 - - - - - - 0.772 0.991 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
8. DAP ENSGALG00000013002 6815 1.746 - - 0.779 - 0.967 - - - - - death associated protein [Source:NCBI gene;Acc:420923]
9. ATAD5 ENSGALG00000003294 4830 1.735 - - - - 0.974 - 0.761 - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
10. BRMS1L ENSGALG00000010093 4964 1.734 - - - - 0.961 - 0.773 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
11. RASA2 ENSGALG00000002850 2231 1.732 - - - - 0.984 - 0.748 - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
12. CRCP ENSGALG00000002587 8809 1.722 - - - - 0.984 - 0.738 - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
13. RCOR3 ENSGALG00000009871 7022 1.713 - - - - - - 0.722 0.991 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
14. RUVBL1 ENSGALG00000005931 9379 1.711 - - - - 0.956 - 0.755 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
15. TCEA2 ENSGALG00000005976 9143 1.71 - - - - 0.955 - 0.755 - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
16. TMEM70 ENSGALG00000033568 10720 1.707 - - - - 0.892 - 0.815 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
17. TMEM184C ENSGALG00000010019 7856 1.706 - - - - 0.981 - 0.725 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
18. TNFAIP8L1 ENSGALG00000004266 12611 1.699 - - - - - - 0.804 0.895 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
19. BBS2 ENSGALG00000042415 1816 1.699 - - - - 0.983 - 0.716 - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
20. KIAA0196 KIAA0196 4011 1.692 - - - - - - 0.732 0.960 - -
21. NUPL1 NUPL1 8197 1.687 - - - - 0.946 - 0.741 - - -
22. COG6 ENSGALG00000017035 2777 1.687 - - - - 0.980 - 0.707 - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
23. LARP7 ENSGALG00000012048 8393 1.685 - - - - 0.962 - 0.723 - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
24. PPA2 ENSGALG00000010582 22301 1.681 - - - - 0.754 - - 0.927 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
25. METAP2 ENSGALG00000011377 16311 1.677 - - - - 0.873 - 0.804 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
26. RFC3 ENSGALG00000017064 7011 1.676 - - - - - - 0.705 0.971 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
27. DBI ENSGALG00000012112 6910 1.675 - - - - 0.909 - 0.766 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
28. TTC37 ENSGALG00000014670 5715 1.668 - - - - 0.955 - 0.713 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
29. DCAF12 ENSGALG00000005800 6419 1.664 - - - - 0.960 - 0.704 - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
30. MRPL54 ENSGALG00000027611 39450 1.66 - - - - - - 0.728 0.932 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
31. CYB5R2 ENSGALG00000032372 7967 1.656 - - - - 0.936 - 0.720 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
32. PPP1R7 ENSGALG00000031766 22187 1.635 - - - - 0.878 - 0.757 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
33. CASP3 ENSGALG00000010638 11572 1.634 - - - - 0.927 - 0.707 - - - caspase 3 [Source:NCBI gene;Acc:395476]
34. ENSGALG00000017396 ENSGALG00000017396 9028 1.62 - - - - - - 0.714 0.906 - -
35. FASN ENSGALG00000040896 17372 1.612 - - - - 0.872 - - 0.740 - - fatty acid synthase [Source:NCBI gene;Acc:396061]
36. NDUFAF2 ENSGALG00000027564 7302 1.6 - - - - 0.802 - 0.798 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
37. ILF2 ENSGALG00000011570 23050 1.598 - - - - 0.856 - 0.742 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
38. ZOV3 ZOV3 3267 1.597 - - - - - - 0.718 0.879 - -
39. PPIH ENSGALG00000004874 25558 1.498 - - - - 0.740 - 0.758 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
40. CTDP1 ENSGALG00000031461 4818 1.49 - - - - - - 0.753 0.737 - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
41. ELF1 ENSGALG00000016947 2769 1.486 - - - - - - 0.783 - - 0.703 E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
42. TERF2 ENSGALG00000000657 7865 1.462 - - - - - - 0.761 0.701 - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
43. MLST8 ENSGALG00000005878 8116 1.433 - - - - - - 0.719 0.714 - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
44. TAPA1 TAPA1 8669 1.41 - - - - - - 0.707 - - 0.703
45. CETN1 ENSGALG00000026741 7243 0.994 - - - - - - - 0.994 - - centrin 1 [Source:NCBI gene;Acc:422668]
46. RBM7 ENSGALG00000007017 8779 0.993 - - - - - - - 0.993 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
47. PPM1D ENSGALG00000035610 6530 0.993 - - - - - - - 0.993 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
48. CRNKL1 ENSGALG00000008429 7280 0.993 - - - - - - - 0.993 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
49. FUNDC2 ENSGALG00000029585 9334 0.992 - - - - - - - 0.992 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
50. CENPL ENSGALG00000038411 4867 0.991 - - - - - - - 0.991 - - centromere protein L [Source:NCBI gene;Acc:426563]
51. gga-mir-6587 ENSGALG00000026386 9441 0.991 - - - - - - - 0.991 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
52. EXO1 ENSGALG00000010748 7572 0.99 - - - - - - - 0.990 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
53. ATE1 ENSGALG00000009502 3751 0.99 - - - - - - - 0.990 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
54. DLC1 ENSGALG00000013715 5297 0.99 - - - - - - - 0.990 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
55. TMEM192 ENSGALG00000009528 2428 0.989 - - - - - - - 0.989 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
56. C6ORF192 C6ORF192 4224 0.989 - - - - - - - 0.989 - -
57. ITPA ENSGALG00000003250 7722 0.988 - - - - 0.988 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
58. PMP22 ENSGALG00000031425 5358 0.988 - - - - - - - 0.988 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
59. NVL ENSGALG00000009322 5286 0.988 - - - - - - - 0.988 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
60. COX7A2L ENSGALG00000037996 13646 0.987 - - - - - - - 0.987 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
61. G3BP2 ENSGALG00000010882 21129 0.987 - - - - - - - 0.987 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
62. RFT1 ENSGALG00000001945 2446 0.986 - - - - - - - 0.986 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
63. NBL1 ENSGALG00000040297 8165 0.986 - - - - - - - 0.986 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
64. SLC35D1 ENSGALG00000011121 4456 0.986 - - - - - - - 0.986 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
65. MAP2K2 ENSGALG00000001267 3857 0.986 - - - - - - - 0.986 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
66. IFT172 ENSGALG00000016509 1226 0.985 - - - - 0.985 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
67. CRELD2 ENSGALG00000008551 2084 0.985 - - - - - - - 0.985 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
68. AP1S3 ENSGALG00000005171 2981 0.985 - - - - 0.985 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
69. RNF207 2949 0.985 - - - - 0.985 - - - - - ring finger protein 207, transcript variant X1
70. REXO5 ENSGALG00000002239 2466 0.984 - - - - 0.984 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
71. ERICH1 ENSGALG00000031021 1495 0.984 - - - - 0.984 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
72. METTL25 1538 0.984 - - - - 0.984 - - - - - methyltransferase like 25, transcript variant X1
73. VCPKMT ENSGALG00000012269 2107 0.984 - - - - 0.984 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
74. Sep-11 Sep-11 2005 0.984 - - - - 0.984 - - - - -
75. DAP3 ENSGALG00000019796 13278 0.984 - - - - 0.984 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
76. FZD6 ENSGALG00000030626 3336 0.984 - - - - 0.984 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
77. DNAJA1 ENSGALG00000023066 3820 0.984 - - - - 0.984 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
78. FANCM ENSGALG00000031182 1030 0.984 - - - - 0.984 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
79. SNIP1 ENSGALG00000002010 1429 0.984 - - - - - - - 0.984 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
80. TCERG1L ENSGALG00000010470 490 0.983 - - - - 0.983 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
81. IL4RA IL4RA 1237 0.983 - - - - 0.983 - - - - -
82. LOC770492 ENSGALG00000027778 695 0.983 - - - - 0.983 - - - - - ras-related and estrogen-regulated growth inhibitor-like
83. ZNF319 ENSGALG00000000999 1272 0.983 - - - - - - - 0.983 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
84. PIGL ENSGALG00000004492 669 0.983 - - - - - - - 0.983 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
85. RPAP3 ENSGALG00000009743 3380 0.983 - - - - 0.983 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
86. RAB23 ENSGALG00000016279 597 0.983 - - - - 0.983 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
87. DRD2 ENSGALG00000007794 399 0.983 - - - - 0.983 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
88. ELAVL4 ENSGALG00000010533 4978 0.983 - - - - - - - 0.983 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
89. ZNF318 ENSGALG00000034040 1758 0.983 - - - - 0.983 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
90. RAI2 ENSGALG00000016538 1074 0.983 - - - - - - - 0.983 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
91. TTL ENSGALG00000008614 3991 0.982 - - - - - - - 0.982 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
92. ALDH18A1 ENSGALG00000034655 3038 0.982 - - - - 0.982 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
93. TEL TEL 1231 0.982 - - - - 0.982 - - - - -
94. OGFOD3 ENSGALG00000001618 2438 0.982 - - - - 0.982 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
95. PPP3R1 ENSGALG00000023648 3417 0.982 - - - - - - - 0.982 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
96. KLF3 ENSGALG00000041717 2787 0.982 - - - - 0.982 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
97. ENSGALG00000012250 ENSGALG00000012250 581 0.982 - - - - - - - 0.982 - -
98. RNF168 ENSGALG00000006392 507 0.982 - - - - - - - 0.982 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
99. ATP2B4 ENSGALG00000003601 3746 0.982 - - - - - - - 0.982 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
100. YAF2 ENSGALG00000009540 8452 0.982 - - - - - - - 0.982 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]

There are 675 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA