Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDHA1

Gene Name Gene ID Reads Annotation
PDHA1 ENSGALG00000016430 7070 pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]











Genes with expression patterns similar to PDHA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDHA1 ENSGALG00000016430 7070 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
2. NDUFAF1 ENSGALG00000008587 14779 1.58 - - - - - - 0.768 0.812 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
3. UBE2E3 ENSGALG00000020793 9517 1.566 - - 0.776 - - - 0.790 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
4. WTAP ENSGALG00000011660 10811 1.565 - - 0.738 - - - 0.827 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
5. TIAR TIAR 2471 1.54 - - 0.785 - - - - - 0.755 -
6. MRPL20 ENSGALG00000001542 28764 1.531 - - - - - - 0.729 0.802 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
7. SPG21 ENSGALG00000007262 8050 1.529 - - - - - - 0.725 0.804 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
8. UTP6 ENSGALG00000003260 4909 1.526 - - 0.738 - - - - 0.788 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
9. REXO2 ENSGALG00000035980 16319 1.52 - - 0.794 - - - 0.726 - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
10. PIGK ENSGALG00000009015 7942 1.518 - - 0.760 - - - - 0.758 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
11. AHCTF1 ENSGALG00000010630 4809 1.518 - - 0.786 - - - - 0.732 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
12. SCO1 ENSGALG00000030475 7304 1.516 - - - - - - 0.713 0.803 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
13. SPCS3 ENSGALG00000010839 19106 1.508 - - 0.709 - - - 0.799 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
14. PFDN1 ENSGALG00000000946 18822 1.507 - - 0.718 - - - - 0.789 - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
15. CEP104 ENSGALG00000000978 1130 1.498 - - 0.747 - - - - - 0.751 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
16. CHORDC1 ENSGALG00000035461 2439 1.496 - - 0.752 - - - 0.744 - - - cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
17. URB1 ENSGALG00000015887 5854 1.496 - - 0.729 - - - 0.767 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
18. DCTD ENSGALG00000010674 8396 1.494 - - 0.765 - - - 0.729 - - - dCMP deaminase [Source:NCBI gene;Acc:422556]
19. CAMSAP2 ENSGALG00000002145 6109 1.488 - - - - - - 0.720 0.768 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
20. CHMP6 ENSGALG00000026428 18026 1.484 - - - - - - 0.730 0.754 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
21. PRPF40A ENSGALG00000012526 7724 1.482 - - 0.701 - - - 0.781 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
22. HNRNPLL ENSGALG00000008504 14719 1.481 - - 0.710 - - - 0.771 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
23. HOXA7 ENSGALG00000026989 6746 1.478 - - 0.734 - - - 0.744 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
24. UBE2D1 ENSGALG00000021213 5876 1.474 - - - - - - 0.729 0.745 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
25. MAPK9 ENSGALG00000039099 5467 1.47 - - - - - - 0.704 0.766 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
26. RNF214 ENSGALG00000036993 3729 1.462 - - 0.755 - - - - 0.707 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
27. BRMS1L ENSGALG00000010093 4964 1.462 - - - - - - 0.710 - 0.752 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
28. SREK1IP1 ENSGALG00000026028 5756 1.457 - - - - - - 0.703 - 0.754 - SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
29. WDR92 ENSGALG00000008760 3934 1.444 - - 0.728 - - - 0.716 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
30. CEP170 ENSGALG00000010733 4177 1.437 - - - - - - 0.708 0.729 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
31. BRE 10440 1.431 - - 0.709 - - - 0.722 - - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
32. HCFC2 ENSGALG00000029616 4525 1.43 - - 0.727 - - - 0.703 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
33. HSPE1 ENSGALG00000009070 87567 1.413 - - 0.704 - 0.709 - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
34. CHN1 ENSGALG00000009293 6415 1.413 - - 0.702 - - - 0.711 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
35. SMU1 ENSGALG00000002014 8136 0.905 - - - - - - 0.905 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
36. RAB3IP ENSGALG00000009959 1652 0.882 - - 0.882 - - - - - - - RAB3A interacting protein, transcript variant X1
37. LEPROT ENSGALG00000011047 7132 0.876 - - - - - - 0.876 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
38. LMAN1 ENSGALG00000034821 12788 0.872 - - - - - - 0.872 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
39. PHAX ENSGALG00000014691 8114 0.871 - - - - - - 0.871 - - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
40. WDR61 ENSGALG00000003221 11352 0.87 - - - - - - 0.870 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
41. RPL7L1 ENSGALG00000011974 20292 0.869 - - - - - - 0.869 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
42. QTRTD1 QTRTD1 10765 0.868 - - - - - - 0.868 - - -
43. EFTUD1 EFTUD1 3455 0.867 - - - - - - - - 0.867 -
44. ZFR ENSGALG00000003235 8466 0.864 - - - - - - 0.864 - - - zinc finger RNA binding protein, transcript variant X3
45. MRPS18A ENSGALG00000010296 11039 0.864 - - - - - - 0.864 - - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
46. CNI CNI 18453 0.861 - - - - - - 0.861 - - -
47. RFC3 ENSGALG00000017064 7011 0.86 - - - - - - 0.860 - - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
48. UQCRC1 ENSGALG00000005789 23201 0.859 - - - - - - 0.859 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
49. KCTD10 ENSGALG00000005138 1191 0.858 - - 0.858 - - - - - - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
50. PSMD12 ENSGALG00000026225 17473 0.857 - - - - - - 0.857 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
51. RANBP1 ENSGALG00000002107 17715 0.856 - - - - - - 0.856 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
52. SBNO1 ENSGALG00000003392 6731 0.856 - - - - - - 0.856 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
53. RRP9 ENSGALG00000043359 9747 0.853 - - - - - - 0.853 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
54. VPS35 ENSGALG00000004375 8059 0.847 - - - - - - 0.847 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
55. LOC776067 ENSGALG00000016808 9164 0.846 - - - - - - 0.846 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
56. TMPO ENSGALG00000011504 14454 0.846 - - - - - - 0.846 - - - thymopoietin [Source:NCBI gene;Acc:417923]
57. EIF4E2 ENSGALG00000007919 8163 0.846 - - - - - - 0.846 - - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
58. MCTS1 ENSGALG00000008517 27514 0.846 - - - - - - 0.846 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
59. CPSF6 ENSGALG00000019355 7634 0.845 - - - - - - 0.845 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
60. CLN6 ENSGALG00000007981 5656 0.844 - - - - - - - 0.844 - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
61. TPD52L2 ENSGALG00000004683 13624 0.844 - - - - - - 0.844 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
62. GLRX3 ENSGALG00000010464 22578 0.842 - - - - - - 0.842 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
63. CHMP5 ENSGALG00000013160 13347 0.841 - - - - - - 0.841 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
64. NXN 20202 0.841 - - - - - - 0.841 - - - nucleoredoxin, transcript variant X1
65. RBBP4 ENSGALG00000003522 72455 0.84 - - - - - - 0.840 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
66. ARPC1A ENSGALG00000004693 11583 0.84 - - - - - - 0.840 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
67. RAD21 ENSGALG00000029523 25658 0.839 - - - - - - 0.839 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
68. SKP2 ENSGALG00000003547 14637 0.839 - - - - - - 0.839 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
69. PPME1 ENSGALG00000017312 2634 0.838 - - 0.838 - - - - - - - protein phosphatase methylesterase 1 [Source:NCBI gene;Acc:419058]
70. EIF2B EIF2B 28702 0.838 - - - - - - 0.838 - - -
71. SRSF6 ENSGALG00000000990 12424 0.837 - - - - - - 0.837 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
72. SDF2L1 ENSGALG00000031982 6084 0.836 - - - - - - 0.836 - - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
73. KDELR2 ENSGALG00000040793 29669 0.836 - - - - - - 0.836 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
74. CDC20 ENSGALG00000009971 11197 0.836 - - - - - - 0.836 - - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
75. STXBP6 ENSGALG00000009847 224 0.835 - - 0.835 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
76. PARN ENSGALG00000003091 6363 0.833 - - - - - - 0.833 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
77. EXO1 ENSGALG00000010748 7572 0.833 - - - - - - 0.833 - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
78. TOMM20 ENSGALG00000035299 23431 0.833 - - - - - - 0.833 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
79. KCTD2 ENSGALG00000007934 15085 0.832 - - - - - - 0.832 - - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
80. RALGAPA2 240 0.832 - - 0.832 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
81. RCHY1 ENSGALG00000023335 12947 0.831 - - - - - - 0.831 - - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
82. TRIP12 ENSGALG00000002929 11713 0.83 - - - - - - 0.830 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
83. PSMD14 ENSGALG00000011128 13335 0.83 - - 0.830 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
84. MRPL54 ENSGALG00000027611 39450 0.829 - - - - - - 0.829 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
85. MRPS33 ENSGALG00000028879 17966 0.827 - - 0.827 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
86. GTPBP4 ENSGALG00000006703 16183 0.827 - - - - - - 0.827 - - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
87. RECQL ENSGALG00000013174 1323 0.826 - - 0.826 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
88. GNL3 ENSGALG00000001613 10911 0.826 - - - - - - 0.826 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
89. PRCC ENSGALG00000040696 9346 0.826 - - - - - - 0.826 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
90. GLO1 ENSGALG00000010127 31662 0.826 - - - - - - 0.826 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
91. STAMBP ENSGALG00000042555 1362 0.824 - - 0.824 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
92. NDC80 ENSGALG00000014801 3237 0.823 - - 0.823 - - - - - - - NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
93. BAG5 ENSGALG00000031062 4498 0.823 - - 0.823 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
94. KDM5B ENSGALG00000038948 50645 0.822 - - - - - - 0.822 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
95. SQLE ENSGALG00000036915 4172 0.822 - - 0.822 - - - - - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
96. HSDL2 ENSGALG00000015663 8966 0.821 - - - - - - 0.821 - - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
97. CENPH ENSGALG00000014788 10601 0.82 - - - - - - 0.820 - - - centromere protein H [Source:NCBI gene;Acc:395316]
98. SRSF5 ENSGALG00000009421 8502 0.82 - - - - - - 0.820 - - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
99. SRRM1 ENSGALG00000001283 23820 0.82 - - - - - - 0.820 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
100. RNF219 ENSGALG00000016911 4458 0.819 - - - - - - 0.819 - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]

There are 684 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA