Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDGFRB

Gene Name Gene ID Reads Annotation
PDGFRB ENSGALG00000030613 4 platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]











Genes with expression patterns similar to PDGFRB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DMB1 ENSGALG00000000162 7 1 - - 1.000 - - - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
2. ENSGALG00000012002 ENSGALG00000012002 4 1 - - 1.000 - - - - - - -
3. PDGFRB ENSGALG00000030613 4 1 - - 1.000 - - - - - - - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
4. GZMM ENSGALG00000015192 8 1 - - 1.000 - - - - - - - granzyme M
5. H2B-V H2B-V 24 0.989 - - 0.989 - - - - - - -
6. BDH1B ENSGALG00000006976 9 0.986 - - 0.986 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
7. LOC418544 ENSGALG00000019175 19 0.985 - - 0.985 - - - - - - - cystathionine beta-synthase-like
8. PTBP3 ENSGALG00000015669 16 0.978 - - 0.978 - - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
9. ZFYVE26 ENSGALG00000028762 18 0.968 - - 0.968 - - - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
10. PGF ENSGALG00000026557 33 0.968 - - 0.968 - - - - - - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
11. LRRC55 ENSGALG00000029130 21 0.958 - - 0.958 - - - - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
12. CD200R1A CD200R1A 105 0.956 - - 0.956 - - - - - - -
13. SYN1 SYN1 432 0.956 - - 0.956 - - - - - - -
14. TP53I3 ENSGALG00000016502 178 0.95 - - 0.950 - - - - - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
15. RAD54L ENSGALG00000010356 7 0.946 - - 0.946 - - - - - - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
16. NPDC1 ENSGALG00000042635 12 0.939 - - 0.939 - - - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
17. ZBTB2 ENSGALG00000012966 112 0.929 - - 0.929 - - - - - - - zinc finger and BTB domain containing 2 [Source:NCBI gene;Acc:421635]
18. SH3BP5 ENSGALG00000039337 17 0.925 - - 0.925 - - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
19. SPRTN ENSGALG00000011065 24 0.925 - - 0.925 - - - - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
20. THBD ENSGALG00000044442 6 0.923 - - 0.923 - - - - - - - thrombomodulin
21. ENSGALG00000006277 ENSGALG00000006277 284 0.923 - - 0.923 - - - - - - -
22. ADMP ENSGALG00000037408 24 0.919 - - 0.919 - - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
23. MPZL1 ENSGALG00000015438 72 0.918 - - 0.918 - - - - - - - myelin protein zero like 1 [Source:HGNC Symbol;Acc:HGNC:7226]
24. GNB4 ENSGALG00000008983 26 0.909 - - 0.909 - - - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
25. PAK7 PAK7 136 0.904 - - 0.904 - - - - - - -
26. STAB2 32 0.903 - - 0.903 - - - - - - - stabilin 2
27. CXorf22 CXorf22 20 0.902 - - 0.902 - - - - - - -
28. RHBG ENSGALG00000013232 233 0.9 - - 0.900 - - - - - - - Rh family B glycoprotein [Source:NCBI gene;Acc:378792]
29. CGN ENSGALG00000000920 407 0.899 - - 0.899 - - - - - - - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
30. CRB2 ENSGALG00000001169 23 0.895 - - 0.895 - - - - - - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
31. HMGCLL1 ENSGALG00000016294 33 0.892 - - 0.892 - - - - - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
32. CHOBF-1 CHOBF-1 41 0.889 - - 0.889 - - - - - - -
33. EPGN ENSGALG00000010859 187 0.88 - - 0.880 - - - - - - - epithelial mitogen [Source:NCBI gene;Acc:497270]
34. KCTD20 ENSGALG00000000511 298 0.867 - - 0.867 - - - - - - - potassium channel tetramerization domain containing 20 [Source:HGNC Symbol;Acc:HGNC:21052]
35. AMHR2 ENSGALG00000012055 55 0.866 - - 0.866 - - - - - - - anti-Mullerian hormone receptor, type II, transcript variant X1
36. SIN3B ENSGALG00000003771 60 0.863 - - 0.863 - - - - - - - SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]
37. TBC1D8 ENSGALG00000016776 42 0.859 - - 0.859 - - - - - - - TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]
38. CHRD ENSGALG00000026983 712 0.858 - - 0.858 - - - - - - - chordin [Source:NCBI gene;Acc:395828]
39. TTLL7 ENSGALG00000008850 49 0.857 - - 0.857 - - - - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
40. MYBL1 ENSGALG00000033304 29 0.856 - - 0.856 - - - - - - - MYB proto-oncogene like 1 [Source:NCBI gene;Acc:396158]
41. SLCO4A1 ENSGALG00000005460 109 0.854 - - 0.854 - - - - - - - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
42. VSX2 ENSGALG00000033517 30 0.852 - - 0.852 - - - - - - - visual system homeobox 2 [Source:NCBI gene;Acc:395536]
43. OXCT1 ENSGALG00000014846 17 0.85 - - 0.850 - - - - - - - 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
44. KIAA1430 KIAA1430 440 0.846 - - 0.846 - - - - - - -
45. GAB3 ENSGALG00000008408 19 0.846 - - 0.846 - - - - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
46. SUFU ENSGALG00000008096 307 0.838 - - 0.838 - - - - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
47. DFFA ENSGALG00000002820 2046 0.835 - - 0.835 - - - - - - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
48. ENSGALG00000019077 ENSGALG00000019077 49 0.835 - - 0.835 - - - - - - -
49. EPB41L5 ENSGALG00000011605 18 0.826 - - 0.826 - - - - - - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
50. INF2 ENSGALG00000011608 36 0.825 - - 0.825 - - - - - - - inverted formin, FH2 and WH2 domain containing [Source:HGNC Symbol;Acc:HGNC:23791]
51. TMEM35A ENSGALG00000005041 115 0.824 - - 0.824 - - - - - - - transmembrane protein 35A [Source:HGNC Symbol;Acc:HGNC:25864]
52. ENSGALG00000026058 ENSGALG00000026058 144 0.823 - - 0.823 - - - - - - -
53. ARV1 ENSGALG00000011155 38 0.822 - - 0.822 - - - - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
54. FAM189A2 ENSGALG00000015110 273 0.817 - - 0.817 - - - - - - - family with sequence similarity 189 member A2 [Source:HGNC Symbol;Acc:HGNC:24820]
55. MAP3K5 ENSGALG00000013892 565 0.816 - - 0.816 - - - - - - - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
56. NUP160 ENSGALG00000043074 46 0.814 - - 0.814 - - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
57. LRRC48 LRRC48 118 0.814 - - 0.814 - - - - - - -
58. VIT ENSGALG00000010583 16 0.811 - - 0.811 - - - - - - - vitrin [Source:NCBI gene;Acc:421471]
59. TNK2 ENSGALG00000027983 144 0.81 - - 0.810 - - - - - - - tyrosine kinase non receptor 2, transcript variant X7
60. KIF24 ENSGALG00000005806 124 0.81 - - 0.810 - - - - - - - kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
61. CUX2 ENSGALG00000004598 231 0.806 - - 0.806 - - - - - - - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
62. SDCCAG8 ENSGALG00000010713 311 0.806 - - 0.806 - - - - - - - serologically defined colon cancer antigen 8, transcript variant X5
63. KIAA0040 ENSGALG00000030543 53 0.803 - - 0.803 - - - - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
64. FLII ENSGALG00000004997 623 0.802 - - 0.802 - - - - - - - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
65. ZFAT ENSGALG00000037698 34 0.8 - - 0.800 - - - - - - - zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
66. ZCCHC11 700 0.796 - - 0.796 - - - - - - - zinc finger CCHC-type containing 11, transcript variant X5
67. ENSGALG00000010911 ENSGALG00000010911 469 0.795 - - 0.795 - - - - - - -
68. ENSGALG00000026422 ENSGALG00000026422 34 0.795 - - 0.795 - - - - - - -
69. NRROS 72 0.789 - - 0.789 - - - - - - - negative regulator of reactive oxygen species, transcript variant X2
70. STOX1 330 0.78 - - 0.780 - - - - - - - storkhead box 1, transcript variant X3
71. UBE2Z ENSGALG00000001315 103 0.777 - - 0.777 - - - - - - - ubiquitin conjugating enzyme E2 Z [Source:HGNC Symbol;Acc:HGNC:25847]
72. CD164 30 0.776 - - 0.776 - - - - - - - CD164 molecule, transcript variant X2
73. CVG1 CVG1 636 0.772 - - 0.772 - - - - - - -
74. ITGA8 ENSGALG00000008747 406 0.767 - - 0.767 - - - - - - - integrin subunit alpha 8 [Source:NCBI gene;Acc:396225]
75. RASD1 ENSGALG00000004860 133 0.767 - - 0.767 - - - - - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
76. ZBTB17 ENSGALG00000035352 280 0.766 - - 0.766 - - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
77. BACH1 ENSGALG00000015828 114 0.764 - - 0.764 - - - - - - - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
78. SMTNL2 ENSGALG00000006069 827 0.764 - - 0.764 - - - - - - - smoothelin like 2 [Source:HGNC Symbol;Acc:HGNC:24764]
79. CHST12 ENSGALG00000004276 653 0.762 - - 0.762 - - - - - - - carbohydrate sulfotransferase 12 [Source:HGNC Symbol;Acc:HGNC:17423]
80. ELMO3 ENSGALG00000030220 375 0.761 - - 0.761 - - - - - - - engulfment and cell motility 3 [Source:NCBI gene;Acc:100857533]
81. CNFI-A4 CNFI-A4 128 0.753 - - 0.753 - - - - - - -
82. TUBGCP4 ENSGALG00000008549 352 0.753 - - 0.753 - - - - - - - tubulin gamma complex associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16691]
83. MTX3 ENSGALG00000014807 127 0.748 - - 0.748 - - - - - - - metaxin 3 [Source:NCBI gene;Acc:427176]
84. ST6GALNAC2L ENSGALG00000006900 85 0.744 - - 0.744 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like, transcript variant X3
85. PNLDC1 ENSGALG00000011624 150 0.74 - - 0.740 - - - - - - - PARN like, ribonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21185]
86. WDR19 ENSGALG00000014064 49 0.733 - - 0.733 - - - - - - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
87. TFB1M ENSGALG00000013647 84 0.733 - - 0.733 - - - - - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
88. DYRK1A ENSGALG00000016053 345 0.726 - - 0.726 - - - - - - - dual specificity tyrosine phosphorylation regulated kinase 1A [Source:NCBI gene;Acc:395233]
89. SYPL1 ENSGALG00000029006 126 0.723 - - 0.723 - - - - - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
90. ENSGALG00000026371 ENSGALG00000026371 106 0.722 - - 0.722 - - - - - - -
91. GMEB1 ENSGALG00000038488 158 0.722 - - 0.722 - - - - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
92. PCDHA11 58 0.72 - - 0.720 - - - - - - - protocadherin alpha 11
93. BMPER ENSGALG00000029811 636 0.719 - - 0.719 - - - - - - - BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
94. GBF1 ENSGALG00000005637 32 0.719 - - 0.719 - - - - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
95. MFAP5 ENSGALG00000027471 161 0.716 - - 0.716 - - - - - - - microfibril associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29673]
96. MIS18BP1 ENSGALG00000012452 1358 0.714 - - 0.714 - - - - - - - MIS18 binding protein 1
97. gga-mir-1564 ENSGALG00000043133 4645 0.711 - - 0.711 - - - - - - - gga-mir-1564 [Source:miRBase;Acc:MI0007289]
98. LMX1A ENSGALG00000003424 335 0.71 - - 0.710 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
99. FANCD2 ENSGALG00000003720 634 0.71 - - 0.710 - - - - - - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
100. AXIN2 ENSGALG00000039200 2333 0.709 - - 0.709 - - - - - - - axin 2 [Source:NCBI gene;Acc:395152]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA