Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDGFRA

Gene Name Gene ID Reads Annotation
PDGFRA ENSG00000134853 7332 platelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]



Genes with expression patterns similar to PDGFRA

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PDGFRA ENSG00000134853 7332 2 1.000 1.000 platelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]
2. CALD1 ENSG00000122786 14110 1.492 0.766 0.726 caldesmon 1 [Source:HGNC Symbol;Acc:HGNC:1441]
3. CXCL12 ENSG00000107562 23857 0.871 0.871 - C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
4. IFITM2 ENSG00000185201 72348 0.851 0.851 - interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
5. COL3A1 ENSG00000168542 140021 0.826 - 0.826 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
6. IL6ST ENSG00000134352 9416 0.822 - 0.822 interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
7. ROR1 ENSG00000185483 9648 0.81 - 0.810 receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
8. MYH10 ENSG00000133026 19118 0.796 0.796 - myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:7568]
9. TPM1 ENSG00000140416 44382 0.791 0.791 - tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
10. ANO6 ENSG00000177119 1116 0.788 - 0.788 anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
11. IFITM3 ENSG00000142089 57239 0.783 0.783 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
12. MEIS1 ENSG00000143995 11216 0.781 0.781 - Meis homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7000]
13. PGAP1 ENSG00000197121 3543 0.773 - 0.773 post-GPI attachment to proteins 1 [Source:HGNC Symbol;Acc:HGNC:25712]
14. ARMCX2 ENSG00000184867 8129 0.771 0.771 - armadillo repeat containing X-linked 2 [Source:HGNC Symbol;Acc:HGNC:16869]
15. NXPH2 ENSG00000144227 683 0.769 - 0.769 neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
16. LAMB1 ENSG00000091136 9036 0.768 0.768 - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
17. PCDH7 ENSG00000169851 5460 0.768 - 0.768 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
18. ARHGAP28 ENSG00000088756 4386 0.765 - 0.765 Rho GTPase activating protein 28 [Source:HGNC Symbol;Acc:HGNC:25509]
19. FLNA ENSG00000196924 5359 0.764 0.764 - filamin A [Source:HGNC Symbol;Acc:HGNC:3754]
20. PDZRN3 ENSG00000121440 3815 0.763 - 0.763 PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
21. EFNB2 ENSG00000125266 4168 0.762 - 0.762 ephrin B2 [Source:HGNC Symbol;Acc:HGNC:3227]
22. SVIL ENSG00000197321 4660 0.762 - 0.762 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
23. SPIN1 ENSG00000106723 7283 0.761 - 0.761 spindlin 1 [Source:HGNC Symbol;Acc:HGNC:11243]
24. MMP2 ENSG00000087245 4593 0.761 0.761 - matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166]
25. TEAD3 ENSG00000007866 2898 0.76 0.760 - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
26. SFRP1 ENSG00000104332 280077 0.757 - 0.757 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
27. ITGB1 ENSG00000150093 34753 0.757 0.757 - integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
28. HMGA2 ENSG00000149948 86734 0.756 0.756 - high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
29. LRRN3 ENSG00000173114 3693 0.755 - 0.755 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
30. RBMS1 ENSG00000153250 11118 0.755 0.755 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
31. PEAR1 ENSG00000187800 3067 0.754 0.754 - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
32. DACT3 ENSG00000197380 2782 0.752 0.752 - dishevelled binding antagonist of beta catenin 3 [Source:HGNC Symbol;Acc:HGNC:30745]
33. LRP6 ENSG00000070018, ENSG00000281324 8752 0.752 - 0.752 LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
34. FLRT3 ENSG00000125848 10097 0.752 0.752 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
35. GATA6 ENSG00000141448 3614 0.75 - 0.750 GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
36. PPP3CA ENSG00000138814 2616 0.75 - 0.750 protein phosphatase 3 catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9314]
37. PEG10 ENSG00000242265 45369 0.749 0.749 - paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
38. PABPC4L ENSG00000254535 843 0.748 - 0.748 poly(A) binding protein cytoplasmic 4 like [Source:HGNC Symbol;Acc:HGNC:31955]
39. PITX2 ENSG00000164093 1113 0.745 - 0.745 paired like homeodomain 2 [Source:HGNC Symbol;Acc:HGNC:9005]
40. SNAI2 ENSG00000019549 22574 0.744 0.744 - snail family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:11094]
41. PPAP2B PPAP2B 5362 0.744 - 0.744
42. SEMA6D ENSG00000137872 5938 0.743 - 0.743 semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
43. TSHZ3 ENSG00000121297 5861 0.74 - 0.740 teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]
44. MAP3K1 ENSG00000095015 8341 0.738 - 0.738 mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
45. PTN ENSG00000105894 11178 0.738 - 0.738 pleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630]
46. FHL2 ENSG00000115641 3164 0.737 0.737 - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
47. BDH2 ENSG00000164039 7252 0.737 - 0.737 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
48. BAMBI ENSG00000095739 2641 0.736 - 0.736 BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
49. CNN2 ENSG00000064666 22298 0.735 0.735 - calponin 2 [Source:HGNC Symbol;Acc:HGNC:2156]
50. FAM198B ENSG00000164125 9061 0.733 0.733 - family with sequence similarity 198 member B [Source:HGNC Symbol;Acc:HGNC:25312]
51. BNC2 ENSG00000173068 7220 0.732 - 0.732 basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
52. SOX6 ENSG00000110693 4046 0.731 - 0.731 SRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]
53. SLC38A2 ENSG00000134294 18805 0.73 - 0.730 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
54. PXDN ENSG00000130508 44183 0.729 0.729 - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
55. ADAMTS7 ENSG00000136378 7794 0.728 0.728 - ADAM metallopeptidase with thrombospondin type 1 motif 7 [Source:HGNC Symbol;Acc:HGNC:223]
56. FZD4 ENSG00000174804 2195 0.727 0.727 - frizzled class receptor 4 [Source:HGNC Symbol;Acc:HGNC:4042]
57. MIR100HG ENSG00000255248 8967 0.726 - 0.726 mir-100-let-7a-2-mir-125b-1 cluster host gene [Source:HGNC Symbol;Acc:HGNC:39522]
58. NYNRIN ENSG00000205978 4875 0.726 0.726 - NYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]
59. GPC3 ENSG00000147257 34465 0.725 0.725 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
60. TWIST2 ENSG00000233608 3167 0.725 0.725 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]
61. GPC6 ENSG00000183098 5564 0.722 - 0.722 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
62. FN1 ENSG00000115414 18367 0.721 - 0.721 fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]
63. EML4 ENSG00000143924 5403 0.721 - 0.721 echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:HGNC:1316]
64. TIMP1 ENSG00000102265 19585 0.719 0.719 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
65. SERPINH1 ENSG00000149257 8264 0.718 0.718 - serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546]
66. LASP1 ENSG00000002834 16618 0.718 0.718 - LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:HGNC:6513]
67. PLXDC2 ENSG00000120594 1798 0.714 - 0.714 plexin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21013]
68. WDR26 ENSG00000162923 5804 0.714 - 0.714 WD repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:21208]
69. PTGIS ENSG00000124212 3432 0.712 0.712 - prostaglandin I2 synthase [Source:HGNC Symbol;Acc:HGNC:9603]
70. Sep-07 Sep-07 16686 0.712 - 0.712
71. CACNB2 ENSG00000165995 488 0.711 - 0.711 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
72. DNAJB4 ENSG00000162616 464 0.71 - 0.710 DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
73. DSC2 ENSG00000134755 3713 0.71 - 0.710 desmocollin 2 [Source:HGNC Symbol;Acc:HGNC:3036]
74. PARVA ENSG00000197702 7507 0.708 0.708 - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
75. MAGED2 ENSG00000102316 27988 0.706 0.706 - MAGE family member D2 [Source:HGNC Symbol;Acc:HGNC:16353]
76. REST ENSG00000084093 6739 0.706 0.706 - RE1 silencing transcription factor [Source:HGNC Symbol;Acc:HGNC:9966]
77. PLS3 ENSG00000102024 7322 0.706 - 0.706 plastin 3 [Source:HGNC Symbol;Acc:HGNC:9091]
78. COL1A2 ENSG00000164692 43340 0.706 0.706 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
79. SP3 ENSG00000172845 6798 0.705 - 0.705 Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]
80. GPSM1 ENSG00000160360 5143 0.703 0.703 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
81. CNTN4 ENSG00000144619 2198 0.702 - 0.702 contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
82. CD81 ENSG00000110651 39138 0.702 0.702 - CD81 molecule [Source:HGNC Symbol;Acc:HGNC:1701]
83. MDK ENSG00000110492 213340 0.701 0.701 - midkine [Source:HGNC Symbol;Acc:HGNC:6972]
84. YIPF5 ENSG00000145817 3021 0.7 - 0.700 Yip1 domain family member 5 [Source:HGNC Symbol;Acc:HGNC:24877]
85. PCDH18 ENSG00000189184 17043 0.7 - 0.700 protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA