Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDGFD

Gene Name Gene ID Reads Annotation
PDGFD ENSGALG00000017179 1517 platelet derived growth factor D [Source:NCBI gene;Acc:418978]











Genes with expression patterns similar to PDGFD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDGFD ENSGALG00000017179 1517 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet derived growth factor D [Source:NCBI gene;Acc:418978]
2. POPDC2 ENSGALG00000014988 281 0.836 - - - - - - - 0.836 - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
3. VRK2 ENSGALG00000032770 117 0.822 - - - - - 0.822 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
4. MALL ENSGALG00000023882 241 0.804 - - - - - - - 0.804 - - mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
5. MNR2 ENSGALG00000011349 3340 0.803 - - - - - - - 0.803 - - homeodomain protein
6. LRRC8D ENSGALG00000020805 164 0.796 - - - - - - - 0.796 - - leucine rich repeat containing 8 VRAC subunit D [Source:HGNC Symbol;Acc:HGNC:16992]
7. ATP1B1 ENSGALG00000015233 5102 0.795 - - - - - - - 0.795 - - ATPase Na+/K+ transporting subunit beta 1 [Source:NCBI gene;Acc:396529]
8. C5H15ORF57 C5H15ORF57 4113 0.793 - - - - - 0.793 - - - -
9. gga-mir-1766 ENSGALG00000028725 54 0.792 - - - - - - - 0.792 - - gga-mir-1766 [Source:miRBase;Acc:MI0007508]
10. SVEP1 ENSGALG00000015721 4026 0.788 - - - - 0.788 - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
11. BBS4 ENSGALG00000001798 667 0.776 - - - - - 0.776 - - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
12. FGD4 ENSGALG00000012932 50 0.764 - - - - - 0.764 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
13. LASP-2 LASP-2 4415 0.764 - - - - - - - 0.764 - -
14. IRF-3 IRF-3 129 0.76 - - - - - - - 0.760 - -
15. KCNMA1 ENSGALG00000004980 261 0.756 - - - - - 0.756 - - - - potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
16. CO6 CO6 1623 0.756 - - - - 0.756 - - - - -
17. ARHGAP40 ENSGALG00000003550 484 0.756 - - - - - - - 0.756 - - Rho GTPase activating protein 40 [Source:NCBI gene;Acc:419168]
18. C2orf40 ENSGALG00000043690 7790 0.754 - - - - 0.754 - - - - - chromosome 2 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:24642]
19. LBP ENSGALG00000006756 1684 0.743 - - 0.743 - - - - - - - lipopolysaccharide binding protein, transcript variant X1
20. FGF7 ENSGALG00000028158 189 0.742 - - - - - 0.742 - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
21. PRNP ENSGALG00000000209 2159 0.741 - - - - - - - 0.741 - - prion protein [Source:NCBI gene;Acc:396452]
22. ANG-1 ANG-1 5239 0.74 - - - - - - - 0.740 - -
23. TBC1D22A ENSGALG00000043058 1614 0.738 - - - - - 0.738 - - - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
24. BET1 ENSGALG00000024485 2451 0.734 - - - - - 0.734 - - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
25. ST6GALNAC1 ENSGALG00000001862 133 0.734 - - - - - - - 0.734 - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396168]
26. TRIM55 ENSGALG00000041327 1097 0.733 - - - - - - - 0.733 - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
27. TMEM63A ENSGALG00000009275 1481 0.731 - - - - - 0.731 - - - - transmembrane protein 63A [Source:HGNC Symbol;Acc:HGNC:29118]
28. OSR1 ENSGALG00000016473 1202 0.731 - - - - - 0.731 - - - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
29. PON2 ENSGALG00000009689 1416 0.73 - - - - - 0.730 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
30. SERPINF2 ENSGALG00000002987 236 0.729 - - - - - 0.729 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
31. ENSGALG00000000017 ENSGALG00000000017 1965 0.729 - - - - - - - 0.729 - -
32. GCHFR ENSGALG00000032239 1608 0.727 - - 0.727 - - - - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
33. FAM65C 36 0.726 - - - - - - - 0.726 - - family with sequence similarity 65 member C, transcript variant X29
34. SLC9A9 ENSGALG00000002374 179 0.726 - - - - - 0.726 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
35. ABCC3 ENSGALG00000007522 340 0.719 - - - - - 0.719 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
36. OVCA2 ENSGALG00000045371 2862 0.718 - - - - - 0.718 - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
37. THBS4 ENSGALG00000014804 4228 0.717 - - - 0.717 - - - - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
38. FUT10 ENSGALG00000015399 1985 0.717 - - - - - - - 0.717 - - fucosyltransferase 10 [Source:NCBI gene;Acc:395073]
39. DSEL ENSGALG00000042505 92 0.716 - - - - - 0.716 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
40. LEMD3 ENSGALG00000009873 347 0.714 - - - - - 0.714 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
41. ACTN2 ENSGALG00000014463 1724 0.714 - - - - - 0.714 - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
42. TPPP ENSGALG00000042784 215 0.712 - - - - - - - 0.712 - - tubulin polymerization promoting protein [Source:HGNC Symbol;Acc:HGNC:24164]
43. ABHD17C ENSGALG00000006420 2220 0.711 - - - - - - - 0.711 - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
44. ADAM12 ENSGALG00000041255 796 0.711 - - - - - - - 0.711 - - ADAM metallopeptidase domain 12 [Source:NCBI gene;Acc:425843]
45. DAB2 ENSGALG00000003803 6143 0.71 - - - - 0.710 - - - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
46. WWC3 ENSGALG00000034834 9392 0.71 - - - - - - - - 0.710 - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
47. LMO2 ENSGALG00000029892 4773 0.71 - - - - - - - 0.710 - - LIM domain only 2 [Source:NCBI gene;Acc:374129]
48. C9orf89 C9orf89 3056 0.705 - - - - - 0.705 - - - -
49. CSRP2 ENSGALG00000029921 6629 0.705 - - - - 0.705 - - - - - cysteine and glycine rich protein 2 [Source:NCBI gene;Acc:396128]
50. DCLK1 ENSGALG00000041263 40 0.704 - - - - - - - 0.704 - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
51. EMP2 ENSGALG00000027058 3925 0.702 - - - - - 0.702 - - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
52. TMEM57 ENSGALG00000001067 3367 0.702 - - - - - 0.702 - - - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA