Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDGFC

Gene Name Gene ID Reads Annotation
PDGFC ENSGALG00000009378 218 platelet derived growth factor C [Source:NCBI gene;Acc:395469]











Genes with expression patterns similar to PDGFC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDGFC ENSGALG00000009378 218 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 platelet derived growth factor C [Source:NCBI gene;Acc:395469]
2. DTX3L ENSGALG00000012075 399 0.829 - - - - 0.829 - - - - - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
3. FGF7 ENSGALG00000028158 189 0.82 - - - - 0.820 - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
4. FANCD2 ENSGALG00000003720 634 0.813 - - - - - - - 0.813 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
5. C3ORF64 C3ORF64 49 0.809 - - - - - 0.809 - - - -
6. HOXB13 ENSGALG00000033154 71 0.809 - - - - - 0.809 - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
7. CLDN3 ENSGALG00000022557 189 0.795 - - - - - 0.795 - - - - claudin 3 [Source:NCBI gene;Acc:374029]
8. IQCH ENSGALG00000007909 128 0.779 - - - - - - - 0.779 - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
9. BDNF ENSGALG00000012163 159 0.776 - - - - - - - 0.776 - - brain derived neurotrophic factor [Source:NCBI gene;Acc:396186]
10. CYP2R1 ENSGALG00000006050 1521 0.769 - - - - - - - 0.769 - - cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]
11. PCDH12 ENSGALG00000002544 36 0.767 - - 0.767 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
12. ANKRD40L ENSGALG00000026189 887 0.766 - - - - - 0.766 - - - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
13. LRP5 ENSGALG00000029533 385 0.761 - - - - - - - 0.761 - - LDL receptor related protein 5 [Source:NCBI gene;Acc:423114]
14. SPI1 ENSGALG00000008127 170 0.755 - - - - - - - 0.755 - - Spi-1 proto-oncogene [Source:NCBI gene;Acc:395879]
15. ENSGALG00000013751 ENSGALG00000013751 26 0.749 - - 0.749 - - - - - - -
16. HPS6 ENSGALG00000020741 4 0.749 - - 0.749 - - - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
17. SBDS ENSGALG00000027989 112 0.742 - - - - - 0.742 - - - - SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
18. TBXA2R ENSGALG00000037888 24 0.737 - - 0.737 - - - - - - - thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
19. ADAMTS15 ENSGALG00000001407 11 0.734 - - - - - 0.734 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
20. GAK ENSGALG00000015352 99 0.734 - - - - - 0.734 - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
21. EGF ENSGALG00000012155 8 0.734 - - - - - 0.734 - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
22. LIPML4 ENSGALG00000006302 2 0.734 - - - - - 0.734 - - - - lipase member M-like 4
23. ENSGALG00000011449 ENSGALG00000011449 2 0.734 - - - - - 0.734 - - - -
24. CRYAA ENSGALG00000016199 12 0.734 - - - - - 0.734 - - - - crystallin alpha A [Source:NCBI gene;Acc:418546]
25. PIK3R4 ENSGALG00000040917 10 0.734 - - - - - 0.734 - - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
26. SLC29A1 ENSGALG00000010182 1522 0.734 - - - - - - - 0.734 - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
27. TOR3A ENSGALG00000004216 1 0.734 - - - - - 0.734 - - - - torsin family 3 member A [Source:HGNC Symbol;Acc:HGNC:11997]
28. SMC1B ENSGALG00000014228 19 0.734 - - - - - 0.734 - - - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
29. ENSGALG00000021517 ENSGALG00000021517 7 0.734 - - - - - 0.734 - - - -
30. CAPN3 ENSGALG00000009050 3 0.734 - - - - - 0.734 - - - - calpain 3 [Source:NCBI gene;Acc:423233]
31. MYRFL ENSGALG00000019352 2 0.733 - - 0.733 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
32. CSF3R ENSGALG00000002112 2 0.733 - - 0.733 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
33. ENSGALG00000009969 ENSGALG00000009969 2 0.733 - - 0.733 - - - - - - -
34. GABRG1 ENSGALG00000020143 5 0.733 - - 0.733 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
35. GIF ENSGALG00000031546 2 0.733 - - 0.733 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
36. GRK6 ENSGALG00000014054 6 0.733 - - - - - 0.733 - - - - G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:HGNC:4545]
37. VCAM1 ENSGALG00000005257 102 0.733 - - 0.733 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
38. TAPP2 TAPP2 2 0.733 - - 0.733 - - - - - - -
39. DOK4 ENSGALG00000001160 2 0.733 - - 0.733 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
40. AGRP ENSGALG00000002244 27 0.733 - - 0.733 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
41. PABPC1L ENSGALG00000004123 2 0.733 - - 0.733 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
42. RHCG ENSGALG00000006635 7 0.733 - - 0.733 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
43. PDE1A ENSGALG00000008885 4 0.733 - - 0.733 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
44. CLDN10 ENSGALG00000019114 2 0.732 - - 0.732 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
45. BRAT1 ENSGALG00000004348 158 0.731 - - - - - - - 0.731 - - BRCA1 associated ATM activator 1, transcript variant X3
46. MPV17 ENSGALG00000026239 1698 0.73 - - - - - - - - - 0.730 MPV17, mitochondrial inner membrane protein [Source:HGNC Symbol;Acc:HGNC:7224]
47. PBEF1 PBEF1 25 0.729 - - - - - 0.729 - - - -
48. KLHL42 ENSGALG00000017296 62 0.726 - - 0.726 - - - - - - - kelch like family member 42 [Source:HGNC Symbol;Acc:HGNC:29252]
49. NME5 ENSGALG00000043569 239 0.724 - - 0.724 - - - - - - - NME/NM23 family member 5 [Source:NCBI gene;Acc:426732]
50. TLR15 ENSGALG00000008166 29 0.723 - - - - - 0.723 - - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
51. KCNS3 ENSGALG00000016470 4 0.721 - - - - - 0.721 - - - - potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
52. ENSGALG00000019202 ENSGALG00000019202 9 0.72 - - 0.720 - - - - - - -
53. AMPH ENSGALG00000032958 111 0.72 - - - - 0.720 - - - - - amphiphysin [Source:NCBI gene;Acc:420761]
54. PLK4 ENSGALG00000010195 514 0.719 - - - - 0.719 - - - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
55. LCA5 ENSGALG00000015878 160 0.718 - - - - - 0.718 - - - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
56. NAALAD2 202 0.714 - - - - - - - 0.714 - - N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
57. ENSGALG00000020995 ENSGALG00000020995 2144 0.711 - - - - - - - 0.711 - -
58. TBCK ENSGALG00000010564 1546 0.71 - - - - - 0.710 - - - - TBC1 domain containing kinase [Source:NCBI gene;Acc:422534]
59. NEIL3 ENSGALG00000010719 47 0.71 - - - - - 0.710 - - - - nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
60. HTR1F ENSGALG00000015494 7 0.709 - - - - - - - 0.709 - - 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]
61. CA10 ENSGALG00000002993 1421 0.709 - - - - - - - 0.709 - - carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369]
62. TMC3 ENSGALG00000006376 12 0.708 - - 0.708 - - - - - - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
63. ITSN1 ENSGALG00000036677 5727 0.708 - - - - - - - 0.708 - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
64. A1CF ENSGALG00000003765 36 0.708 - - - - - 0.708 - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
65. TRIM62 ENSGALG00000028437 5124 0.708 - - - - 0.708 - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
66. NUDCD3 ENSGALG00000038299 2691 0.707 - - - - - - - 0.707 - - NudC domain containing 3 [Source:HGNC Symbol;Acc:HGNC:22208]
67. gga-mir-1652 ENSGALG00000025444 119 0.707 - - 0.707 - - - - - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
68. MGRN1 ENSGALG00000037492 372 0.706 - - - - - 0.706 - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
69. FAM167B ENSGALG00000003301 11 0.706 - - - - - - - - - 0.706 family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
70. ENSGALG00000027164 ENSGALG00000027164 8 0.706 - - - - - 0.706 - - - -
71. ATRN ENSGALG00000016034 16 0.706 - - - - - 0.706 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
72. FAM150B 44 0.705 - - - - - 0.705 - - - - family with sequence similarity 150 member B, transcript variant X2
73. ENSGALG00000028936 ENSGALG00000028936 57 0.705 - - - - 0.705 - - - - -
74. KIAA1328 ENSGALG00000002419 162 0.702 - - - - - 0.702 - - - - KIAA1328 [Source:NCBI gene;Acc:426890]
75. ENSGALG00000027367 ENSGALG00000027367 7 0.701 - - - - - 0.701 - - - -
76. PKD2 ENSGALG00000010921 55 0.7 - - - - - 0.700 - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA