Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDGF-A

Gene Name Gene ID Reads Annotation
PDGF-A PDGF-A 5166











Genes with expression patterns similar to PDGF-A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDGF-A PDGF-A 5166 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CUL5 ENSGALG00000017165 2480 1.669 - - 0.766 - - - - 0.903 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
3. ABCE1 ENSGALG00000009961 958 1.659 - - 0.753 - - - - 0.906 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
4. TTPAL ENSGALG00000004244 2734 1.651 - - 0.739 - - - - 0.912 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
5. ANO6 ENSGALG00000009638 470 1.63 - - - - - - - 0.915 - 0.715 anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
6. NF1 ENSGALG00000005660 1610 1.629 - - 0.714 - - - - 0.915 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
7. RSRC2 ENSGALG00000004493 9008 1.505 - - - - - - 0.705 0.800 - - arginine and serine rich coiled-coil 2 [Source:NCBI gene;Acc:416864]
8. RAD54L2 ENSGALG00000003243 187 1.463 - - 0.761 - - - - - - 0.702 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
9. TMEM242 ENSGALG00000013689 377 1.463 - - 0.759 - - - - - - 0.704 transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
10. SMOC2 ENSGALG00000011205 340 1.441 - - 0.738 0.703 - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
11. TXN2 ENSGALG00000012532 12518 1.436 - - 0.736 - - - 0.700 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
12. SIPA1L2 ENSGALG00000037506 3651 0.95 - - - - - - - 0.950 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
13. SUN1 ENSGALG00000003781 3442 0.949 - - - - - - - 0.949 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
14. CLUAP1 ENSGALG00000030877 4269 0.944 - - - - - - - 0.944 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
15. C10ORF58 C10ORF58 5045 0.938 - - - - - - - 0.938 - -
16. TST ENSGALG00000012488 5314 0.937 - - - - - - - 0.937 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
17. NAPEPLD ENSGALG00000008285 1295 0.935 - - - - - - - 0.935 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
18. GNPAT ENSGALG00000011163 4286 0.935 - - - - - - - 0.935 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
19. SURF1 ENSGALG00000033754 2130 0.933 - - - - - - - 0.933 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
20. RPS6KA RPS6KA 6745 0.933 - - - - - - - 0.933 - -
21. LSMD1 LSMD1 2562 0.932 - - - - - - - 0.932 - -
22. GTF2H4 GTF2H4 5227 0.931 - - - - - - - 0.931 - -
23. CLCN7 ENSGALG00000030826 3173 0.93 - - - - - - - 0.930 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
24. ENSGALG00000009863 ENSGALG00000009863 7375 0.93 - - - - - - - 0.930 - -
25. SERINC1 ENSGALG00000014868 12484 0.93 - - - - - - - 0.930 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
26. CENPI ENSGALG00000005038 2608 0.929 - - - - - - - 0.929 - - centromere protein I [Source:NCBI gene;Acc:395207]
27. MAP3K4 ENSGALG00000020003 6378 0.929 - - - - - - - 0.929 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
28. MICU1 ENSGALG00000004372 1978 0.929 - - - - - - - 0.929 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
29. MST4 MST4 1931 0.929 - - - - - - - 0.929 - -
30. KIF25 ENSGALG00000011299 2601 0.929 - - - - - - - 0.929 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
31. PLA2G12A ENSGALG00000012185 5261 0.928 - - - - - - - 0.928 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
32. USP12P1 USP12P1 4193 0.928 - - - - - - - 0.928 - -
33. ENSGALG00000017324 ENSGALG00000017324 8235 0.928 - - - - - - - 0.928 - -
34. LGALS1_1 ENSGALG00000012420 1560 0.927 - - - - - - - 0.927 - - galectin 1 [Source:NCBI gene;Acc:396491]
35. TMEM33 ENSGALG00000014248 6069 0.927 - - - - - - - 0.927 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
36. PARPBP ENSGALG00000012756 1895 0.926 - - - - - - - 0.926 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
37. C1orf50 ENSGALG00000004800 4894 0.925 - - - - - - - 0.925 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
38. SNTB1 ENSGALG00000034528 3907 0.924 - - - - - - - 0.924 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
39. ESRRG ENSGALG00000009645 2783 0.923 - - - - - - - 0.923 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
40. PPM1B ENSGALG00000030691 4513 0.923 - - - - - - - 0.923 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
41. STX16 ENSGALG00000007541 6458 0.923 - - - - - - - 0.923 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
42. TAF1B ENSGALG00000016437 2318 0.922 - - - - - - - 0.922 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
43. OFD1 ENSGALG00000016576 1916 0.922 - - - - - - - 0.922 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
44. NUDT4 ENSGALG00000011285 2998 0.921 - - - - - - - 0.921 - - nudix hydrolase 4, transcript variant X5
45. POLD3 ENSGALG00000017307 2136 0.921 - - - - - - - 0.921 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
46. GOLPH3 ENSGALG00000028267 9692 0.92 - - - - - - - 0.920 - - golgi phosphoprotein 3, transcript variant X1
47. OSR1 ENSGALG00000016473 1202 0.92 - - - - - - - 0.920 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
48. DNA2 ENSGALG00000004037 5426 0.919 - - - - - - - 0.919 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
49. MACF1 ENSGALG00000003693 1043 0.919 - - - - - - - 0.919 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
50. WDYHV1 ENSGALG00000030059 2961 0.919 - - - - - - - 0.919 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
51. ZBTB24 ENSGALG00000015231 1384 0.919 - - - - - - - 0.919 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
52. ZBED4 ENSGALG00000032659 5313 0.919 - - - - - - - 0.919 - - zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
53. POLR1C ENSGALG00000010349 7059 0.918 - - - - - - - 0.918 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
54. SUV420H1 SUV420H1 2361 0.918 - - - - - - - 0.918 - -
55. ZMYM3 ENSGALG00000005533 2927 0.918 - - - - - - - 0.918 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
56. ATAD2 ENSGALG00000034348 4440 0.917 - - - - - - - 0.917 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
57. SMARCD2 ENSGALG00000029304 11867 0.917 - - - - - - - 0.917 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
58. TRIP11 ENSGALG00000010763 3146 0.917 - - - - - - - 0.917 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
59. PRKAB2 ENSGALG00000001678 1999 0.916 - - - - - - - 0.916 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
60. FBXW5 ENSGALG00000030831 5927 0.916 - - - - - - - 0.916 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
61. DMTF1 ENSGALG00000030844 3584 0.916 - - - - - - - 0.916 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
62. TRAFD1 ENSGALG00000043208 1009 0.915 - - - - - - - 0.915 - - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
63. CMTM7 ENSGALG00000011488 1406 0.914 - - - - - - - 0.914 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
64. STAU2 ENSGALG00000031390 2008 0.914 - - - - - - - 0.914 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
65. ATG2B ENSGALG00000042088 918 0.912 - - - - - - - 0.912 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
66. CHMP2B ENSGALG00000015496 3973 0.912 - - - - - - - 0.912 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
67. CHTF18 ENSGALG00000040157 2140 0.912 - - - - - - - 0.912 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
68. DCUN1D2 ENSGALG00000029145 2414 0.911 - - - - - - - 0.911 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
69. FAF1 ENSGALG00000010536 1522 0.911 - - - - - - - 0.911 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
70. MCAT ENSGALG00000034275 4598 0.911 - - - - - - - 0.911 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
71. SMPD2 ENSGALG00000033245 462 0.91 - - - - - - - 0.910 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
72. gga-mir-1737 ENSGALG00000025206 3910 0.91 - - - - - - - 0.910 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
73. PIBPPDD4L ENSGALG00000003345 1689 0.909 - - - - - - - 0.909 - - 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4-like
74. XRCC3 ENSGALG00000011533 3768 0.909 - - - - - - - 0.909 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
75. MED12L ENSGALG00000010370 765 0.908 - - - - - - - 0.908 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
76. FER1L6 ENSGALG00000033783 196 0.908 - - - - - - - 0.908 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
77. CNEP1R1 ENSGALG00000029793 6536 0.908 - - - - - - - 0.908 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
78. DAB1 ENSGALG00000010857 1085 0.908 - - - - - - - 0.908 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
79. ENSGALG00000003847 ENSGALG00000003847 1220 0.908 - - - - - - - 0.908 - -
80. gga-mir-6596 ENSGALG00000026117 2893 0.908 - - - - - - - 0.908 - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
81. ZNF142 ENSGALG00000011393 2078 0.908 - - - - - - - 0.908 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
82. HNMT ENSGALG00000012377 227 0.907 - - - - - - - 0.907 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
83. ZNF652 ENSGALG00000001279 1188 0.907 - - - - - - - 0.907 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
84. SMPDL3B ENSGALG00000000737 223 0.905 - - - - - - - 0.905 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
85. CHCHD6 ENSGALG00000006056 6121 0.905 - - - - - - - 0.905 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
86. PPP1CB ENSGALG00000010026 6909 0.905 - - - - - - - 0.905 - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
87. KIAA1239 KIAA1239 263 0.904 - - - - - - - 0.904 - -
88. TMEM185A ENSGALG00000009139 4424 0.903 - - - - - - - 0.903 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
89. RGN ENSGALG00000016724 3184 0.903 - - - - - - - 0.903 - - regucalcin [Source:NCBI gene;Acc:395480]
90. ARHGAP12 ENSGALG00000007254 479 0.901 - - - - - - - 0.901 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
91. LAMB1 ENSGALG00000007905 7737 0.901 - - - - - - - 0.901 - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
92. VWF ENSGALG00000017272 1012 0.901 - - - - - - - 0.901 - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
93. PRRG1 ENSGALG00000016266 3473 0.899 - - - - - - - 0.899 - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
94. SLC16A9 ENSGALG00000003172 266 0.899 - - - - - - - 0.899 - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
95. FAM92A1 FAM92A1 511 0.899 - - - - - - - 0.899 - -
96. KAT6B ENSGALG00000005035 301 0.899 - - - - - - - 0.899 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
97. ZNF598 ENSGALG00000005598 8270 0.898 - - - - - - - 0.898 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
98. MKP3 MKP3 4418 0.897 - - - - - - - 0.897 - -
99. OSBPL1A ENSGALG00000015086 2702 0.895 - - - - - - - 0.895 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
100. SEMA6D ENSGALG00000030542 3780 0.892 - - - - - - - 0.892 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]

There are 354 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA