Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDE6C

Gene Name Gene ID Reads Annotation
PDE6C ENSGALG00000006626 6 phosphodiesterase 6C [Source:NCBI gene;Acc:395834]











Genes with expression patterns similar to PDE6C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDE6C ENSGALG00000006626 6 4 - - 1.000 1.000 - 1.000 1.000 - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
2. GPX2 ENSGALG00000042031 4 1 - - - 1.000 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
3. CYP39A1 ENSGALG00000016710 16 1 - - - - - - 1.000 - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
4. JMJD4 ENSGALG00000005417 10 1 - - - - - - 1.000 - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
5. GBP ENSGALG00000026152 38 1 - - - - - - 1.000 - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
6. CPB2 ENSGALG00000016985 3 1 - - - 1.000 - - - - - - carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]
7. FAM26D ENSGALG00000014955 1 1 - - - - - - 1.000 - - - family with sequence similarity 26 member D
8. DAZL ENSGALG00000011243 34 1 - - - - - - 1.000 - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
9. KRT20 ENSGALG00000019716 11 1 - - - - - - 1.000 - - - keratin 20 [Source:NCBI gene;Acc:420045]
10. MBLAC2 ENSGALG00000014649 16 1 - - - - - - 1.000 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
11. DHX58 ENSGALG00000023821 15 1 - - - 1.000 - - - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
12. INTS3 8 1 - - - - - - 1.000 - - - integrator complex subunit 3, transcript variant X2
13. AGPAT2 ENSGALG00000023517 21 1 - - - - - - 1.000 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
14. STK31 ENSGALG00000010980 4 1 - - - - - - 1.000 - - - serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]
15. IPCEF1 ENSGALG00000013625 3 1 - - - 1.000 - - - - - - interaction protein for cytohesin exchange factors 1, transcript variant X3
16. ODF1 ENSGALG00000035199 32 1 - - - - - - 1.000 - - - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
17. DNAI2 ENSGALG00000004495 45 1 - - - - - - 1.000 - - - dynein axonemal intermediate chain 2
18. ENSGALG00000000789 ENSGALG00000000789 24 1 - - - - - - 1.000 - - -
19. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - 1.000 - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
20. ENSGALG00000018374 ENSGALG00000018374 3 1 - - - - - - 1.000 - - -
21. SNAPC4 ENSGALG00000044726 36 1 - - - - - - 1.000 - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
22. SYTL2L ENSGALG00000008326 5 1 - - - - - - 1.000 - - - synaptotagmin-like protein 2-like, transcript variant X4
23. RBBP6_1 ENSGALG00000006043 26 1 - - - - - - 1.000 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
24. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - 1.000 - - - - - -
25. LPP ENSGALG00000007337 18 1 - - - - - - 1.000 - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
26. KAT2A ENSGALG00000003369 19 1 - - 1.000 - - - - - - - lysine acetyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:4201]
27. DDAH1 ENSGALG00000008663 8 1 - - - - - - 1.000 - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
28. gga-mir-1652 ENSGALG00000025444 119 1 - - - - - - 1.000 - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
29. WNT9A ENSGALG00000005401 7 1 - - - - - - 1.000 - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
30. FAM120B ENSGALG00000011180 101 1 - - - - - - 1.000 - - - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
31. AMER3 ENSGALG00000041501 5 1 - - - - - - 1.000 - - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
32. FMO3 ENSGALG00000040573 26 1 - - - 1.000 - - - - - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
33. HOXB4 ENSGALG00000000284 16 1 - - - - - - 1.000 - - - homeobox B4 [Source:NCBI gene;Acc:396230]
34. SEC14L5 ENSGALG00000045758 25 0.999 - - - 0.999 - - - - - - SEC14 like lipid binding 5 [Source:HGNC Symbol;Acc:HGNC:29032]
35. NOXO1 ENSGALG00000005572 14 0.995 - - - 0.995 - - - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
36. RASGRP1 ENSGALG00000009740 15 0.98 - - - 0.980 - - - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
37. BCL2 ENSGALG00000012885 45 0.975 - - - 0.975 - - - - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
38. BST1 ENSGALG00000014509 12 0.969 - - - 0.969 - - - - - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
39. TMEM269 ENSGALG00000025800 143 0.968 - - - 0.968 - - - - - - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
40. C1orf222 C1orf222 61 0.964 - - - 0.964 - - - - - -
41. CXorf36 ENSGALG00000016215 108 0.96 - - - 0.960 - - - - - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
42. ENSGALG00000002252 ENSGALG00000002252 19 0.956 - - - - - 0.956 - - - -
43. ENSGALG00000014750 ENSGALG00000014750 9 0.955 - - - 0.955 - - - - - -
44. CYP1A1 ENSGALG00000001325 6 0.955 - - - 0.955 - - - - - - cytochrome P450, family 1, subfamily A, polypeptide 1 [Source:NCBI gene;Acc:396052]
45. ST6GAL1 ENSGALG00000005550 20 0.952 - - - 0.952 - - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396169]
46. ENSGALG00000022662 ENSGALG00000022662 17 0.946 - - - 0.946 - - - - - -
47. C14orf105 C14orf105 135 0.945 - - - 0.945 - - - - - -
48. RPS6KA3 ENSGALG00000016406 24 0.942 - - - - - - 0.942 - - - ribosomal protein S6 kinase A3 [Source:HGNC Symbol;Acc:HGNC:10432]
49. OPN4-1 ENSGALG00000041662 10 0.932 - - - 0.932 - - - - - - photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
50. USP49 ENSGALG00000003461 10 0.93 - - 0.930 - - - - - - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
51. MAB21L1 ENSGALG00000045052 1677 0.926 - - - 0.926 - - - - - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
52. EREG ENSGALG00000010864 46 0.915 - - - 0.915 - - - - - - epiregulin [Source:NCBI gene;Acc:408036]
53. SOHO-1 ENSGALG00000015599 110 0.913 - - - 0.913 - - - - - - sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
54. SVOP ENSGALG00000034278 27 0.909 - - - 0.909 - - - - - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
55. TNFSF10 ENSGALG00000009179 226 0.907 - - - 0.907 - - - - - - tumor necrosis factor superfamily member 10 [Source:NCBI gene;Acc:378894]
56. HAND1 ENSGALG00000035104 2351 0.905 - - - 0.905 - - - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
57. GAREM GAREM 16 0.903 - - - - - 0.903 - - - -
58. GPR174 ENSGALG00000004111 16 0.902 - - - 0.902 - - - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
59. IL10R2 IL10R2 72 0.897 - - 0.897 - - - - - - -
60. IL18R1 ENSGALG00000040621 12 0.88 - - - 0.880 - - - - - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
61. MTTP ENSGALG00000035619 6 0.877 - - - 0.877 - - - - - - microsomal triglyceride transfer protein [Source:NCBI gene;Acc:422709]
62. SLCO2A1 ENSGALG00000006471 18 0.876 - - - 0.876 - - - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
63. MAPK8 ENSGALG00000006109 51 0.868 - - - 0.868 - - - - - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
64. C1QB ENSGALG00000004771 368 0.866 - - - 0.866 - - - - - - complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]
65. EFCAB6 ENSGALG00000014188 139 0.861 - - - - - - 0.861 - - - EF-hand calcium binding domain 6, transcript variant X3
66. MAP3K21 ENSGALG00000011008 54 0.853 - - - - - 0.853 - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
67. ETNK1 ENSGALG00000013205 18 0.846 - - - 0.846 - - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
68. FXYD2 ENSGALG00000007320 168 0.845 - - - 0.845 - - - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
69. SEC24D ENSGALG00000011998 68 0.845 - - - - - 0.845 - - - - SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
70. MCT2L ENSGALG00000007596 127 0.84 - - - 0.840 - - - - - - monocarboxylate transporter 2-like, transcript variant X5
71. GPAM ENSGALG00000008795 18 0.839 - - - - - - 0.839 - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
72. HPX ENSGALG00000022586 46 0.835 - - - 0.835 - - - - - - hemopexin [Source:HGNC Symbol;Acc:HGNC:5171]
73. PNPLA7 ENSGALG00000008736 206 0.834 - - - - - - 0.834 - - - patatin like phospholipase domain containing 7 [Source:NCBI gene;Acc:427774]
74. ADPRHL1 ENSGALG00000016826 133 0.825 - - - 0.825 - - - - - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
75. GYG2 ENSGALG00000016655 41 0.821 - - - 0.821 - - - - - - glycogenin 2 [Source:HGNC Symbol;Acc:HGNC:4700]
76. ITGA6 ENSGALG00000034007 53 0.818 - - 0.818 - - - - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
77. ADAM17 ENSGALG00000016427 49 0.815 - - - 0.815 - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
78. SNORA33 SNORA33 11 0.814 - - - - - - 0.814 - - -
79. HSD3B7 ENSGALG00000045366 12 0.813 - - - 0.813 - - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
80. TMSB10 TMSB10 518 0.813 - - - - - - 0.813 - - -
81. NADK2 ENSGALG00000003558 79 0.81 - - - - - 0.810 - - - - NAD kinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26404]
82. SP2 ENSGALG00000000233 43 0.81 - - - 0.810 - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
83. CD99L2 ENSGALG00000009075 5 0.809 - - - - - - 0.809 - - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
84. ENSGALG00000010439 ENSGALG00000010439 68 0.808 - - - 0.808 - - - - - -
85. DUSP27 ENSGALG00000015453 17 0.805 - - - 0.805 - - - - - - dual specificity phosphatase 27, atypical [Source:HGNC Symbol;Acc:HGNC:25034]
86. MYOCD ENSGALG00000001021 351 0.798 - - - 0.798 - - - - - - myocardin [Source:NCBI gene;Acc:427790]
87. HBE1 ENSGALG00000028273 189 0.798 - - - - - - 0.798 - - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
88. PTPN3 ENSGALG00000022909 6 0.79 - - 0.790 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
89. TMEM56 ENSGALG00000005580 10 0.79 - - 0.790 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
90. ARHGEF38 ENSGALG00000010577 1 0.79 - - 0.790 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
91. SNORD53 SNORD53 1 0.79 - - 0.790 - - - - - - -
92. HIVEP3 ENSGALG00000027365 10 0.79 - - 0.790 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
93. KCNAB2 ENSGALG00000037241 1 0.79 - - 0.790 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
94. SI ENSGALG00000009511 5 0.79 - - 0.790 - - - - - - - sucrase-isomaltase
95. RAB44 ENSGALG00000000544 6 0.79 - - 0.790 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
96. SLC25A38 ENSGALG00000041275 1 0.79 - - 0.790 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
97. CHIC2 ENSGALG00000013931 21 0.79 - - 0.790 - - - - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
98. AMOTL1 ENSGALG00000017208 5 0.79 - - 0.790 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
99. TFAP4 ENSGALG00000027823 12 0.79 - - 0.790 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
100. ATP6V1C2 ENSGALG00000016446 3 0.79 - - 0.790 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]

There are 113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA