Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PDE1C

Gene Name Gene ID Reads Annotation
PDE1C PDE1C 1










Genes with expression patterns similar to PDE1C

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - - - 1.000 - - - -
2. si:rp71-18l21.1 si:rp71-18l21.1 2 2 1.000 - - - 1.000 - - - -
3. PTCHD2 PTCHD2 2 2 1.000 - - - 1.000 - - - -
4. PDE1C PDE1C 1 2 1.000 - - - 1.000 - - - -
5. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1.764 0.764 - - - 1.000 - - - -
6. si:ch211-117m20.4 ENSDARG00000094286 7 1.761 1.000 - - - 0.761 - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
7. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
8. svopa ENSDARG00000056833 14 1 - - - - 1.000 - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
9. fstl5 ENSDARG00000040198 213 1 1.000 - - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
10. rhpn1 ENSDARG00000052454 3 1 - - - - 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
11. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
12. isg15 ENSDARG00000086374 8 1 1.000 - - - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
13. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
14. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
15. CU570691.1 ENSDARG00000088908 5 1 - - - - 1.000 - - - -
16. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 1.000 - - - - - - - -
17. ZNF70_5 ZNF70_5 25 1 - - - - 1.000 - - - -
18. taar20b1 ENSDARG00000110415, ENSDARG00000110775, ENSDARG00000112935 1 1 - - - - 1.000 - - - - trace amine associated receptor 20b1 [Source:ZFIN;Acc:ZDB-GENE-060413-5]
19. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
20. CU655870.1 ENSDARG00000101035 1 1 - - - - 1.000 - - - -
21. gng2_1 ENSDARG00000056831 113 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
22. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
23. GPR64 GPR64 58 1 1.000 - - - - - - - -
24. aglb ENSDARG00000100352 22 1 1.000 - - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
25. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
26. si:dkey-40j3.3 ENSDARG00000103597 5 1 1.000 - - - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
27. CABZ01073071.2 CABZ01073071.2 0 1 - - - - 1.000 - - - -
28. anks4b ENSDARG00000036846 8 1 - - - - 1.000 - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
29. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
30. RIMS1 RIMS1 9 1 1.000 - - - - - - - -
31. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
32. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
33. WNK3 WNK3 36 1 1.000 - - - - - - - -
34. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - 1.000 - - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
35. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
36. CU570781.1 ENSDARG00000094656 49 1 1.000 - - - - - - - -
37. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
38. MYO7B MYO7B 8 1 - - - - 1.000 - - - -
39. si:ch211-262a22.3 si:ch211-262a22.3 0 1 - - - - 1.000 - - - -
40. si:ch211-284d12.1 si:ch211-284d12.1 1 1 1.000 - - - - - - - -
41. rhol ENSDARG00000070666 0 1 - - - - 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
42. zgc:175107 ENSDARG00000075417 39 1 - - - - 1.000 - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
43. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
44. U3_9 U3_9 4 1 - - - - 1.000 - - - -
45. btf3l4 ENSDARG00000089681 2 1 - - - - 1.000 - - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
46. BX004816.1 ENSDARG00000040497 0 1 - - - - 1.000 - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571124]
47. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
48. tcf3a ENSDARG00000005915 12 1 - - - - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
49. mir92a-1 20 1 1.000 - - - - - - - - microRNA 92a-1
50. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
51. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
52. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
53. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
54. EDN3 14 1 - - - - 1.000 - - - - endothelin 3
55. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
56. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
57. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
58. pcdh1gb9 ENSDARG00000088475 71 1 1.000 - - - - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
59. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
60. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
61. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
62. WASF1 ENSDARG00000060349 1 1 - - - - 1.000 - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
63. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
64. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
65. lim2.2 ENSDARG00000059015 11 1 - - - - 1.000 - - - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
66. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
67. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
68. CU694320.1 CU694320.1 6 1 - - - - 1.000 - - - -
69. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
70. mir15a-1 36 1 1.000 - - - - - - - - microRNA 15a-1
71. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
72. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
73. FETUB ENSDARG00000053973 4 1 - - - - 1.000 - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
74. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
75. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
76. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
77. CR352328.3 CR352328.3 9 1 1.000 - - - - - - - -
78. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
79. AFAP1L1 AFAP1L1 1 1 - - - - 1.000 - - - -
80. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
81. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 1.000 - - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
82. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - 1.000 - - - - si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
83. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - 1.000 - - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
84. zgc:113176 ENSDARG00000040487 30 1 - - - - 1.000 - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
85. CCDC74B CCDC74B 8 1 - - - - 1.000 - - - -
86. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
87. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
88. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
89. si:dkey-76d18.1 si:dkey-76d18.1 0 1 - - - - 1.000 - - - -
90. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
91. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
92. BX005356.2 BX005356.2 2 1 - - - - 1.000 - - - -
93. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
94. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
95. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
96. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
97. dusp19 dusp19 0 1 - - - - 1.000 - - - -
98. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
99. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
100. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]

There are 364 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA