Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDE1A

Gene Name Gene ID Reads Annotation
PDE1A ENSGALG00000008885 4 phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]











Genes with expression patterns similar to PDE1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDE1A ENSGALG00000008885 4 3 - - 1.000 1.000 1.000 - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
2. VCAM1 ENSGALG00000005257 102 1 - - 1.000 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
3. IGHMBP2 ENSGALG00000004328 118 1 - - - - 1.000 - - - - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
4. TAPP2 TAPP2 2 1 - - 1.000 - - - - - - -
5. CLDN16 ENSGALG00000025821 14 1 - - - - 1.000 - - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
6. DOK4 ENSGALG00000001160 2 1 - - 1.000 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
7. CHRNA3 ENSGALG00000003014 6 1 - - - - 1.000 - - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
8. AGRP ENSGALG00000002244 27 1 - - 1.000 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
9. TRPM3 ENSGALG00000015126 2 1 - - - - 1.000 - - - - - transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]
10. RHCG ENSGALG00000006635 7 1 - - 1.000 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
11. PABPC1L ENSGALG00000004123 2 1 - - 1.000 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
12. FARP2 ENSGALG00000005788 6 1 - - - - 1.000 - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
13. MC4R ENSGALG00000012907 1 1 - - - - 1.000 - - - - - melanocortin 4 receptor [Source:NCBI gene;Acc:428485]
14. MCF2L2 ENSGALG00000008744 8 1 - - - - 1.000 - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
15. MYRFL ENSGALG00000019352 2 1 - - 1.000 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
16. CSF3R ENSGALG00000002112 2 1 - - 1.000 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
17. ENSGALG00000009969 ENSGALG00000009969 2 1 - - 1.000 - - - - - - -
18. GABRG1 ENSGALG00000020143 5 1 - - 1.000 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
19. KLRD1 ENSGALG00000014722 27 1 - - - - 1.000 - - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
20. VTG1 ENSGALG00000039354 17 1 - - - - 1.000 - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
21. SLC51A ENSGALG00000007478 6 1 - - - - 1.000 - - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
22. GIF ENSGALG00000031546 2 1 - - 1.000 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
23. LRRC19 ENSGALG00000045028 2 1 - - - - 1.000 - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
24. CRTAC1 ENSGALG00000017378 15 1 - - - - 1.000 - - - - - cartilage acidic protein 1 [Source:NCBI gene;Acc:425346]
25. COL19A1 ENSGALG00000043584 38 1 - - - - 1.000 - - - - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
26. ANKEF1 ENSGALG00000008996 12 1 - - - - 1.000 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
27. CLDN10 ENSGALG00000019114 2 0.956 - - 0.956 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
28. MZB1 ENSGALG00000044427 6 0.954 - - 0.954 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
29. CD101 12 0.954 - - 0.954 - - - - - - - CD101 molecule, transcript variant X4
30. UPB1 ENSGALG00000006627 139 0.954 - - 0.954 - - - - - - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
31. PCDH12 ENSGALG00000002544 36 0.953 - - 0.953 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
32. gga-mir-21 ENSGALG00000021733 42 0.937 - - 0.937 - - - - - - - gga-mir-21 [Source:miRBase;Acc:MI0004994]
33. gga-mir-1652 ENSGALG00000025444 119 0.935 - - 0.935 - - - - - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
34. TBXA2R ENSGALG00000037888 24 0.932 - - 0.932 - - - - - - - thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
35. KCTD14 ENSGALG00000017266 31 0.932 - - 0.932 - - - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
36. HELB ENSGALG00000009885 8 0.923 - - 0.923 - - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
37. TMC3 ENSGALG00000006376 12 0.905 - - 0.905 - - - - - - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
38. PTPN13 ENSGALG00000011078 62 0.895 - - - - 0.895 - - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
39. HPS6 ENSGALG00000020741 4 0.89 - - 0.890 - - - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
40. CASS4 ENSGALG00000007744 10 0.88 - - - 0.880 - - - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
41. C3orf58 ENSGALG00000002347 27 0.877 - - 0.877 - - - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
42. UNC80 ENSGALG00000041563 15 0.874 - - 0.874 - - - - - - - unc-80 homolog, NALCN activator, transcript variant X3
43. NOXRED1 ENSGALG00000042509 27 0.873 - - 0.873 - - - - - - - NADP dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20487]
44. DGKG ENSGALG00000005721 17 0.866 - - 0.866 - - - - - - - diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
45. PIAS2 ENSGALG00000039434 73 0.859 - - 0.859 - - - - - - - protein inhibitor of activated STAT 2 [Source:NCBI gene;Acc:416383]
46. CALCRL ENSGALG00000002632 4 0.857 - - - 0.857 - - - - - - calcitonin receptor like receptor [Source:NCBI gene;Acc:423990]
47. ANGPTL5 ENSGALG00000017191 2 0.857 - - - 0.857 - - - - - - angiopoietin like 5 [Source:NCBI gene;Acc:772036]
48. ANKRD44 ENSGALG00000007996 17 0.857 - - - 0.857 - - - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
49. SMG5 ENSGALG00000029918 8 0.857 - - - 0.857 - - - - - - SMG5, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:24644]
50. GUCY1B3 29 0.857 - - - 0.857 - - - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
51. CARD8 ENSGALG00000007698 45 0.857 - - - 0.857 - - - - - - caspase recruitment domain family, member 8
52. RCBTB2 ENSGALG00000017000 3 0.857 - - - 0.857 - - - - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
53. GPR65 ENSGALG00000010595 2 0.857 - - - 0.857 - - - - - - G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
54. SLC26A5 ENSGALG00000008222 3 0.857 - - - 0.857 - - - - - - solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
55. SAPCD2 12 0.857 - - - 0.857 - - - - - - suppressor APC domain containing 2, transcript variant X1
56. KLHL38 ENSGALG00000038946 1 0.857 - - - 0.857 - - - - - - kelch like family member 38 [Source:HGNC Symbol;Acc:HGNC:34435]
57. 5S_1 5S_1 2 0.857 - - - 0.857 - - - - - -
58. GSC ENSGALG00000010974 7 0.857 - - - 0.857 - - - - - - goosecoid homeobox [Source:NCBI gene;Acc:396273]
59. ABTB2 ENSGALG00000031889 9 0.857 - - - 0.857 - - - - - - ankyrin repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23842]
60. SH3GL3 ENSGALG00000006045 12 0.857 - - - 0.857 - - - - - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
61. AMOTL1 ENSGALG00000017208 5 0.857 - - - 0.857 - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
62. GREB1L ENSGALG00000014935 88 0.85 - - 0.850 - - - - - - - GREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]
63. TRIL ENSGALG00000011145 2 0.85 - - 0.850 - - - - - - - TLR4 interactor with leucine rich repeats [Source:HGNC Symbol;Acc:HGNC:22200]
64. SLC32A1 ENSGALG00000038919 61 0.849 - - 0.849 - - - - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
65. NFXL1 ENSGALG00000014138 36 0.839 - - - - 0.839 - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
66. SERPINB5 ENSGALG00000012873 24 0.838 - - 0.838 - - - - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
67. STX19 ENSGALG00000015413 28 0.835 - - - 0.835 - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
68. ENSGALG00000019202 ENSGALG00000019202 9 0.83 - - 0.830 - - - - - - -
69. CHRNA6 ENSGALG00000015382 31 0.826 - - 0.826 - - - - - - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
70. MCF2 ENSGALG00000006562 59 0.82 - - 0.820 - - - - - - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
71. LRFN2 ENSGALG00000010050 28 0.819 - - - 0.819 - - - - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
72. RGS20 ENSGALG00000025941 108 0.816 - - 0.816 - - - - - - - regulator of G protein signaling 20 [Source:NCBI gene;Acc:395646]
73. VWA1 ENSGALG00000001527 79 0.813 - - 0.813 - - - - - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
74. HSD17B2 ENSGALG00000005467 275 0.81 - - 0.810 - - - - - - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
75. BAAT ENSGALG00000040619 579 0.803 - - - - 0.803 - - - - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
76. MYH11 ENSGALG00000006520 166 0.796 - - 0.796 - - - - - - - myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
77. PTGES ENSGALG00000038013 77 0.795 - - 0.795 - - - - - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
78. DMRTB1 ENSGALG00000029023 35 0.793 - - - - 0.793 - - - - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
79. TMEM200A ENSGALG00000002282 77 0.791 - - 0.791 - - - - - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
80. TTC36 ENSGALG00000006812 63 0.791 - - - 0.791 - - - - - - tetratricopeptide repeat domain 36 [Source:NCBI gene;Acc:419757]
81. GOLPH3L ENSGALG00000014640 272 0.788 - - - - 0.788 - - - - - golgi phosphoprotein 3 like, transcript variant X2
82. FRS2 ENSGALG00000009966 63 0.784 - - 0.784 - - - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
83. ENSGALG00000028652 ENSGALG00000028652 65 0.781 - - 0.781 - - - - - - -
84. PPP1R3E ENSGALG00000003492, ENSGALG00000041047 376 0.778 - - 0.778 - - - - - - - protein phosphatase 1 regulatory subunit 3E [Source:HGNC Symbol;Acc:HGNC:14943]
85. ZNF521 ENSGALG00000015112 8 0.776 - - 0.776 - - - - - - - zinc finger protein 521 [Source:HGNC Symbol;Acc:HGNC:24605]
86. FOXN4 ENSGALG00000005062 7 0.773 - - 0.773 - - - - - - - forkhead box N4 [Source:NCBI gene;Acc:416898]
87. JADE2 ENSGALG00000006424 4 0.773 - - 0.773 - - - - - - - jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]
88. PTP4A3 ENSGALG00000040969 10 0.768 - - 0.768 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:HGNC Symbol;Acc:HGNC:9636]
89. MTMR7 13 0.763 - - 0.763 - - - - - - - myotubularin related protein 7, transcript variant X1
90. TMEM132D ENSGALG00000002671 12 0.753 - - 0.753 - - - - - - - transmembrane protein 132D, transcript variant X6
91. ENSGALG00000000789 ENSGALG00000000789 24 0.735 - - - 0.735 - - - - - -
92. GAD67 GAD67 146 0.734 - - 0.734 - - - - - - -
93. PDGFC ENSGALG00000009378 218 0.733 - - 0.733 - - - - - - - platelet derived growth factor C [Source:NCBI gene;Acc:395469]
94. PARP8 ENSGALG00000032991 17 0.732 - - 0.732 - - - - - - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
95. ENSGALG00000020884 ENSGALG00000020884 22 0.732 - - 0.732 - - - - - - -
96. NME5 ENSGALG00000043569 239 0.729 - - 0.729 - - - - - - - NME/NM23 family member 5 [Source:NCBI gene;Acc:426732]
97. LOC101750367 ENSGALG00000006693 5 0.723 - - - 0.723 - - - - - - BPI fold-containing family B member 4-like, transcript variant X3
98. FHL1 ENSGALG00000006190 22 0.719 - - 0.719 - - - - - - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
99. ENSGALG00000020103 ENSGALG00000020103 64 0.718 - - - 0.718 - - - - - -
100. ZP1 ENSGALG00000031916 122 0.716 - - 0.716 - - - - - - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]

There are 10 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA