Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDDC1

Gene Name Gene ID Reads Annotation
PDDC1 5179 Parkinson disease 7 domain containing 1, transcript variant X6











Genes with expression patterns similar to PDDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDDC1 5179 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Parkinson disease 7 domain containing 1, transcript variant X6
2. CYB5R2 ENSGALG00000032372 7967 1.632 - - - - - - 0.776 0.856 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
3. NUP50 ENSGALG00000014222 11743 1.623 - - - - - - 0.838 0.785 - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
4. WRB ENSGALG00000016070 5199 1.596 - - - - - - 0.788 0.808 - - tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
5. TOR1AIP1 ENSGALG00000029238 5843 1.587 - - - - - - 0.804 0.783 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
6. MED27 ENSGALG00000003683 6808 1.561 - - - - - - 0.728 0.833 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
7. POLR1B ENSGALG00000032273 3845 1.527 - - - - - - 0.775 0.752 - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
8. IGBP1 ENSGALG00000044628 9200 1.51 - - - - - - 0.735 0.775 - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
9. BET1L ENSGALG00000004172 5305 1.5 - - - - - - 0.700 0.800 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
10. ACBD5 ENSGALG00000007519 1646 1.499 - - - - - - 0.790 0.709 - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
11. NT5C3B ENSGALG00000003651 5190 1.496 - - - - - - 0.731 0.765 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
12. IREB2 ENSGALG00000035462 10659 1.492 - - - - - - 0.727 0.765 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
13. MYC ENSGALG00000033631 16949 1.491 - - - - - - 0.729 - 0.762 - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
14. TMEM161A ENSGALG00000025809 2813 1.49 - - - - - - - 0.757 0.733 - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
15. PHF2 ENSGALG00000039208 2003 1.487 - - - - - - 0.714 0.773 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
16. TXNDC11 ENSGALG00000003154 2224 1.442 - - - - - - 0.713 0.729 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
17. MAP2K4 ENSGALG00000032178 5982 1.438 - - - - - - 0.731 0.707 - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
18. MCM4 ENSGALG00000012915 13151 0.923 - - - - - - - 0.923 - - minichromosome maintenance complex component 4
19. ARID2 ENSGALG00000033074 3461 0.906 - - - - - - - 0.906 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
20. CREPT CREPT 17142 0.901 - - - - - - - 0.901 - -
21. RNH1 ENSGALG00000006904 14542 0.891 - - - - - - - 0.891 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
22. UBR4 ENSGALG00000030563 5225 0.879 - - - - - - - 0.879 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
23. XRN1 ENSGALG00000002706 4014 0.872 - - - - - - - 0.872 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
24. RNPS1 ENSGALG00000009288 13588 0.866 - - - - - - 0.866 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
25. ARHGAP11A ENSGALG00000009731 6817 0.866 - - - - - - 0.866 - - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
26. LOC112529965 ENSGALG00000010758 5395 0.864 - - - - - - - 0.864 - - NADH-cytochrome b5 reductase-like
27. LSM5 ENSGALG00000041625 22307 0.859 - - - - - - 0.859 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
28. STOML2 STOML2 15566 0.859 - - - - - - - 0.859 - -
29. NEK6 ENSGALG00000001118 20333 0.858 - - - - - - 0.858 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
30. CCDC53 CCDC53 3732 0.857 - - - - - - - 0.857 - -
31. GTPBP4 ENSGALG00000006703 16183 0.856 - - - - - - - 0.856 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
32. PSMC3 ENSGALG00000008108 22922 0.856 - - - - - - 0.856 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
33. TAF1A ENSGALG00000009441 2431 0.854 - - - - - - - 0.854 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
34. RCAN3 ENSGALG00000004282 7778 0.852 - - - - - - - 0.852 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
35. NOC4L ENSGALG00000002272 9644 0.852 - - - - - - 0.852 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
36. DDX19B ENSGALG00000039967 49600 0.848 - - - - - - 0.848 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
37. CDC34 ENSGALG00000024332 4562 0.847 - - - - - - 0.847 - - - cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
38. RNF185 ENSGALG00000006960 5428 0.847 - - - - - - - 0.847 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
39. UTP3 ENSGALG00000011553 8814 0.846 - - - - - - - 0.846 - - UTP3, small subunit processome component homolog (S. cerevisiae)
40. OGFOD1 6926 0.846 - - - - - - - 0.846 - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
41. CASK ENSGALG00000042400 8485 0.845 - - - - - - 0.845 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
42. PTPN4 3030 0.844 - - - - - - - 0.844 - - protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
43. FBXO7 ENSGALG00000012569 4124 0.843 - - - - - - - 0.843 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
44. VBP1 VBP1 14482 0.84 - - - - - - 0.840 - - -
45. HERC2 ENSGALG00000016739 9900 0.84 - - - - - - 0.840 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
46. TTF1 4214 0.84 - - - - - - - 0.840 - - transcription termination factor 1
47. PDLIM5 ENSGALG00000012211 3064 0.838 - - - - - - - 0.838 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
48. BLOC1S5 ENSGALG00000012782 5885 0.836 - - - - - - 0.836 - - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
49. TPRKB ENSGALG00000013018 8687 0.834 - - - - - - 0.834 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
50. MTMR8 ENSGALG00000007590 6022 0.833 - - - - - - - 0.833 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
51. RPL35 ENSGALG00000035677 252113 0.832 - - - - - - 0.832 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
52. PHLDB2 ENSGALG00000015377 8560 0.832 - - - - - - - 0.832 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
53. RUVBL1 ENSGALG00000005931 9379 0.831 - - - - - - 0.831 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
54. LIMS1 ENSGALG00000029970 7244 0.831 - - - - - - - 0.831 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
55. PAXIP1 ENSGALG00000036064 3120 0.83 - - - - - - 0.830 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
56. CUX1_1 ENSGALG00000021636 3705 0.829 - - - - - - - 0.829 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
57. NUPL1 NUPL1 8197 0.829 - - - - - - 0.829 - - -
58. MRPL37 ENSGALG00000010761 10596 0.829 - - - - - - 0.829 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
59. FAM177A1 ENSGALG00000010046 4318 0.829 - - - - - - 0.829 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
60. CRTAP ENSGALG00000034163 6453 0.829 - - - - - - - 0.829 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
61. IBTK ENSGALG00000015864 3154 0.828 - - - - - - - 0.828 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
62. BRMS1L ENSGALG00000010093 4964 0.828 - - - - - - 0.828 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
63. TAF5 ENSGALG00000008241 5227 0.826 - - - - - - - 0.826 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
64. TERF1 ENSGALG00000037453 4497 0.826 - - - - - - - 0.826 - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
65. ACTR8 ENSGALG00000005385 3647 0.823 - - - - - - 0.823 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
66. TBC1D7 ENSGALG00000012731 4891 0.822 - - - - - - - 0.822 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
67. RELL1 ENSGALG00000014336 2950 0.821 - - - - - - - 0.821 - - RELT like 1 [Source:NCBI gene;Acc:422795]
68. PLRG1 ENSGALG00000009257 8613 0.82 - - - - - - 0.820 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
69. GLT8D1 ENSGALG00000001642 4232 0.82 - - - - - - - 0.820 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
70. XRN2 ENSGALG00000008372 22164 0.82 - - - - - - 0.820 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
71. CDC45 ENSGALG00000001616 8432 0.819 - - - - - - 0.819 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
72. IFRD1 ENSGALG00000009448 8865 0.819 - - - - - - 0.819 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
73. INCENP ENSGALG00000007537 16617 0.817 - - - - - - 0.817 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
74. CZH9ORF41 CZH9ORF41 3492 0.816 - - - - - - 0.816 - - -
75. GNG12 ENSGALG00000026591 5817 0.814 - - - - - - - 0.814 - - G protein subunit gamma 12, transcript variant X21
76. TBCD ENSGALG00000001503 7880 0.814 - - - - - - 0.814 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
77. BUD13_1 ENSGALG00000025882 1118 0.814 - - - - - - - 0.814 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
78. TXNDC17 ENSGALG00000027950 45004 0.814 - - - - - - 0.814 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
79. ISCU ENSGALG00000004869 6852 0.813 - - - - - - - 0.813 - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
80. C1QBP ENSGALG00000001654 34814 0.812 - - - - - - 0.812 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
81. SLC39A9 ENSGALG00000009438 4838 0.812 - - - - - - - 0.812 - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
82. NSMCE2 ENSGALG00000043439 5658 0.811 - - - - - - - 0.811 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
83. TMEM194B TMEM194B 3815 0.811 - - - - - - 0.811 - - -
84. RPN1 ENSGALG00000005907 25315 0.81 - - - - - - - 0.810 - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
85. CDC23 ENSGALG00000007610 11945 0.81 - - - - - - 0.810 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
86. KLHDC4 ENSGALG00000037315 9828 0.81 - - - - - - 0.810 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
87. SAR1B ENSGALG00000038753 6493 0.809 - - - - - - 0.809 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
88. NDUFV2 ENSGALG00000036625 29234 0.809 - - - - - - 0.809 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
89. TMEM70 ENSGALG00000033568 10720 0.808 - - - - - - 0.808 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
90. FBXL17 ENSGALG00000000276 2443 0.808 - - - - - - - 0.808 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
91. SNX12 ENSGALG00000005659 9503 0.808 - - - - - - - 0.808 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
92. MRPS30 ENSGALG00000014874 3416 0.807 - - - - - - 0.807 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
93. TTC3 ENSGALG00000016050 4115 0.806 - - - - - - 0.806 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
94. NCAPH ENSGALG00000032270 2103 0.806 - - - - - - - 0.806 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
95. NDRG3 ENSGALG00000001492 5919 0.805 - - - - - - - 0.805 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
96. DGCR2 ENSGALG00000005891 8405 0.805 - - - - - - 0.805 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
97. SGCB ENSGALG00000013968 3214 0.805 - - - - - - 0.805 - - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
98. RAB12 ENSGALG00000033608 14160 0.804 - - - - - - - 0.804 - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
99. ATR ENSGALG00000002663 4626 0.804 - - - - - - 0.804 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
100. WDR43 ENSGALG00000032529 12235 0.804 - - - - - - 0.804 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]

There are 548 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA