Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCL3

Gene Name Gene ID Reads Annotation
PDCL3 ENSGALG00000016772 14897 phosducin like 3 [Source:NCBI gene;Acc:418709]











Genes with expression patterns similar to PDCL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCL3 ENSGALG00000016772 14897 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 phosducin like 3 [Source:NCBI gene;Acc:418709]
2. GYG1 ENSGALG00000035535 6311 1.808 - - - - - - 0.874 0.934 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
3. STAMBP ENSGALG00000042555 1362 1.703 - - 0.766 - - - - 0.937 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
4. NAA30 ENSGALG00000012098 4681 1.685 - - 0.775 - - - - 0.910 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
5. ADAR ENSGALG00000021475 6004 1.684 - - - - - - 0.743 0.941 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
6. RRBP1 ENSGALG00000008676 5376 1.661 - - 0.723 - - - - 0.938 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
7. ABHD13 ENSGALG00000016853 4975 1.655 - - 0.783 - - - 0.872 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
8. PANK1 ENSGALG00000006431 2910 1.624 - - 0.782 - - - 0.842 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
9. HYAL1 ENSGALG00000000785 1778 1.624 - - 0.769 - - - 0.855 - - - hyaluronoglucosaminidase 1, transcript variant X3
10. IFT81 ENSGALG00000003854 2534 1.612 - - 0.788 - - - 0.824 - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
11. PTDSS2 ENSGALG00000004300 682 1.612 - - 0.777 - - - 0.835 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
12. WHSC1 1712 1.61 - - 0.774 - - - 0.836 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
13. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.579 - - 0.711 - - - 0.868 - - -
14. COG7 ENSGALG00000006156 4072 1.579 - - 0.762 - - - 0.817 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
15. TAF1B ENSGALG00000016437 2318 1.57 - - 0.713 - - - 0.857 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
16. FOXK2 ENSGALG00000001577 6346 1.555 - - 0.704 - - - 0.851 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
17. FBXO9 ENSGALG00000016320 9600 1.535 - - - - - - 0.728 0.807 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
18. TAF5 ENSGALG00000008241 5227 1.465 - - 0.722 - - - 0.743 - - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
19. NUSAP1 ENSGALG00000008584 9955 1.461 - - - - - - 0.733 0.728 - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
20. BRE 10440 1.41 - - 0.704 - - - 0.706 - - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
21. CSNK2A1 ENSGALG00000006197 41409 0.976 - - - - - - - 0.976 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
22. NSUN4 ENSGALG00000010360 3567 0.967 - - - - - - - 0.967 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
23. LONP2 ENSGALG00000003942 3380 0.957 - - - - - - 0.957 - - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
24. NNT ENSGALG00000014869 8496 0.951 - - - - - - 0.951 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
25. CPSF4 ENSGALG00000004714 14353 0.948 - - - - - - - 0.948 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
26. DERL1 ENSGALG00000033950 15074 0.942 - - - - - - - 0.942 - - derlin 1 [Source:NCBI gene;Acc:420350]
27. PTK7 ENSGALG00000008609 8081 0.941 - - - - - - - 0.941 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
28. PDCD6 ENSGALG00000013400 7611 0.941 - - - - - - - 0.941 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
29. FAT1 ENSGALG00000013579 6030 0.941 - - - - - - - 0.941 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
30. LMO7 ENSGALG00000016920 3809 0.941 - - - - - - - 0.941 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
31. VPS36 ENSGALG00000017026 3658 0.94 - - - - - - - 0.940 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
32. SLC52A3 ENSGALG00000006194 3952 0.94 - - - - - - - 0.940 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
33. PPAT ENSGALG00000013728 7563 0.94 - - - - - - - 0.940 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
34. CWC22 ENSGALG00000009001 5984 0.94 - - - - - - - 0.940 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
35. PHAX ENSGALG00000014691 8114 0.94 - - - - - - - 0.940 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
36. ZNF462 ENSGALG00000015451 12653 0.939 - - - - - - - 0.939 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
37. VEGFC ENSGALG00000010847 2197 0.939 - - - - - - - 0.939 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
38. CREB1 ENSGALG00000008494 2219 0.939 - - - - - - - 0.939 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
39. CTU2 4818 0.939 - - - - - - - 0.939 - - cytosolic thiouridylase subunit 2, transcript variant X3
40. KLHDC2 ENSGALG00000012244 12903 0.939 - - - - - - - 0.939 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
41. SLBP ENSGALG00000015712 5586 0.939 - - - - - - - 0.939 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
42. USP30 ENSGALG00000040265 2000 0.938 - - - - - - - 0.938 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
43. C9orf89 C9orf89 3056 0.938 - - - - - - - 0.938 - -
44. INTS2 ENSGALG00000005269 6966 0.938 - - - - - - - 0.938 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
45. TNFRSF21 ENSGALG00000016719 2762 0.938 - - - - - - - 0.938 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
46. WDFY3 10775 0.937 - - - - - - - 0.937 - - WD repeat and FYVE domain containing 3, transcript variant X7
47. ATL1 ENSGALG00000012339 3789 0.937 - - - - - - 0.937 - - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
48. TMEM69 ENSGALG00000010279 716 0.937 - - - - - - - 0.937 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
49. GNA12 ENSGALG00000004368 692 0.937 - - - - - - - 0.937 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
50. PRRX2 ENSGALG00000028236 1990 0.937 - - - - - - - 0.937 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
51. ENSGALG00000028413 ENSGALG00000028413 551 0.937 - - - - - - - 0.937 - -
52. TDRD1 ENSGALG00000046180 612 0.937 - - - - - - - 0.937 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
53. SIN3A ENSGALG00000001644 1141 0.937 - - - - - - - 0.937 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
54. USP42 ENSGALG00000003378 1392 0.937 - - - - - - - 0.937 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
55. B4GAL-T7 B4GAL-T7 12356 0.93 - - - - - - 0.930 - - -
56. BMP4 ENSGALG00000012429 4306 0.93 - - - - - - - 0.930 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
57. RNF8 ENSGALG00000023256 5495 0.929 - - - - - - 0.929 - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
58. TIPIN ENSGALG00000007649 3565 0.928 - - - - - - 0.928 - - - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
59. ATP5J 14451 0.927 - - - - - - 0.927 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
60. MGST1 ENSGALG00000013098 17632 0.925 - - - - - - - 0.925 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
61. ACTR6 ENSGALG00000040976 31271 0.924 - - - - - - - 0.924 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
62. MAP4K3 ENSGALG00000039720 5124 0.923 - - - - - - - 0.923 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
63. LAMTOR2 ENSGALG00000029881 35356 0.922 - - - - - - - 0.922 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
64. FAM49B ENSGALG00000036490 7984 0.919 - - - - - - 0.919 - - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
65. CAB39 ENSGALG00000027262 6779 0.915 - - - - - - 0.915 - - - calcium binding protein 39 [Source:HGNC Symbol;Acc:HGNC:20292]
66. MYEF2 ENSGALG00000032546 7436 0.913 - - - - - - 0.913 - - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
67. RPL7L1 ENSGALG00000011974 20292 0.905 - - - - - - - 0.905 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
68. BUD31 ENSGALG00000004705 19474 0.902 - - - - - - 0.902 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
69. GLO1 ENSGALG00000010127 31662 0.9 - - - - - - - 0.900 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
70. DDX42 ENSGALG00000000581 8780 0.897 - - - - - - 0.897 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
71. RB1 ENSGALG00000016997 3712 0.897 - - - - - - 0.897 - - - retinoblastoma 1 [Source:NCBI gene;Acc:386582]
72. MRPS22 ENSGALG00000005367 8307 0.895 - - - - - - 0.895 - - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
73. LAPTM4A ENSGALG00000016479 15973 0.894 - - - - - - - 0.894 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
74. GARNL3 ENSGALG00000000847 3423 0.894 - - - - - - 0.894 - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
75. C11orf57 C11orf57 4971 0.891 - - - - - - - 0.891 - -
76. SPATA20 ENSGALG00000006857 3506 0.889 - - - - - - - 0.889 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
77. EDF1 ENSGALG00000038003 6757 0.887 - - - - - - 0.887 - - - endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]
78. CPQ ENSGALG00000030866 3962 0.887 - - - - - - 0.887 - - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
79. PITPNB ENSGALG00000005654 21578 0.886 - - - - - - 0.886 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
80. PGRMC1 ENSGALG00000020260 19059 0.886 - - - - - - 0.886 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
81. MCM6 ENSGALG00000012348 12523 0.885 - - - - - - - 0.885 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
82. MTFR1L ENSGALG00000000998 3457 0.884 - - - - - - 0.884 - - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
83. ANXA11 ENSGALG00000043826 5189 0.884 - - - - - - 0.884 - - - annexin A11 [Source:NCBI gene;Acc:423637]
84. USP5 ENSGALG00000014525 21883 0.884 - - - - - - 0.884 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
85. PSMD6 ENSGALG00000007315 3906 0.884 - - - - - - 0.884 - - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
86. ETV5 ENSGALG00000005768 9679 0.883 - - - - - - 0.883 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
87. HSPA12A ENSGALG00000009248 7783 0.883 - - - - - - - 0.883 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
88. MPP1 ENSGALG00000005071 3865 0.883 - - - - - - 0.883 - - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
89. FARP1 ENSGALG00000016886 13132 0.883 - - - - - - - 0.883 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
90. DPCD ENSGALG00000007731 7225 0.883 - - - - - - 0.883 - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
91. KDM4A ENSGALG00000010074 7219 0.883 - - - - - - 0.883 - - - lysine demethylase 4A
92. CLN6 ENSGALG00000007981 5656 0.882 - - - - - - 0.882 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
93. TIMM23B ENSGALG00000002089 8122 0.882 - - - - - - - 0.882 - - translocase of inner mitochondrial membrane 23 homolog B
94. C1GALT1 ENSGALG00000009752 7148 0.882 - - - - - - 0.882 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
95. BEND5 ENSGALG00000010505 3298 0.881 - - - - - - 0.881 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
96. TBC1D12 ENSGALG00000034044 5588 0.881 - - - - - - 0.881 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
97. AP1S3 ENSGALG00000005171 2981 0.88 - - - - - - 0.880 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
98. RALGAPB ENSGALG00000001420 5112 0.88 - - - - - - 0.880 - - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
99. ZBTB26 ENSGALG00000042762 1920 0.879 - - - - - - 0.879 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
100. MRPL23 ENSGALG00000006561 13737 0.879 - - - - - - 0.879 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]

There are 578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA