Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCD7

Gene Name Gene ID Reads Annotation
PDCD7 ENSGALG00000021027 3807 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]











Genes with expression patterns similar to PDCD7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD7 ENSGALG00000021027 3807 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
2. gga-mir-6681 ENSGALG00000027840 546 1.864 - - - - - - - 0.974 - 0.890 gga-mir-6681 [Source:miRBase;Acc:MI0022502]
3. MAN1A1 ENSGALG00000014878 1061 1.818 - - - - - - - 0.967 - 0.851 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
4. SIAH2 ENSGALG00000010395 2126 1.787 - - - - - - - 0.969 - 0.818 siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
5. ADAMTS12 55 1.729 - - - - - 0.746 - - - 0.983 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
6. MED14 ENSGALG00000016238 4685 1.631 - - - - - - 0.705 0.926 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
7. DGKB ENSGALG00000033561 170 1.624 - - - - - 0.720 - - - 0.904 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
8. TMEM55A 2902 1.624 - - - - - - - 0.908 - 0.716 transmembrane protein 55A
9. U2SURP ENSGALG00000002612 4255 1.619 - - - - - - 0.737 - - 0.882 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
10. MPDZ ENSGALG00000005846 3179 1.611 - - - - - - 0.719 0.892 - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
11. NCDN ENSGALG00000002408 6180 1.593 - - - - - - 0.705 0.888 - - neurochondrin [Source:NCBI gene;Acc:419633]
12. ZNF609 ENSGALG00000040087 2299 1.581 - - - - - - 0.717 - - 0.864 zinc finger protein 609 [Source:NCBI gene;Acc:415331]
13. EHD3 ENSGALG00000009086 14407 1.495 - - - - - - 0.738 - - 0.757 EH domain containing 3 [Source:NCBI gene;Acc:421306]
14. CRTAP ENSGALG00000034163 6453 1.493 - - - - - - 0.715 - - 0.778 cartilage associated protein [Source:NCBI gene;Acc:395992]
15. SLC39A9 ENSGALG00000009438 4838 1.492 - - - - - - 0.773 - - 0.719 solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
16. MED27 ENSGALG00000003683 6808 1.467 - - - - - - 0.703 - - 0.764 mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
17. ENSGALG00000027621 ENSGALG00000027621 863 0.987 - - - - - - - - - 0.987
18. ATP2B2 ENSGALG00000030908 584 0.987 - - - - - - - - - 0.987 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
19. GPR114 GPR114 46 0.987 - - - - - - - - - 0.987
20. ENSGALG00000005785 ENSGALG00000005785 1570 0.986 - - - - - - - 0.986 - -
21. UBE3C ENSGALG00000006461 57 0.986 - - - - - - - - - 0.986 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
22. ENSGALG00000008594 ENSGALG00000008594 54 0.985 - - - - - - - - - 0.985
23. SOS2 ENSGALG00000012273 41 0.985 - - - - - - - - - 0.985 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
24. PRICKLE1 ENSGALG00000009556 60 0.985 - - - - - - - - - 0.985 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
25. MAP3K8 ENSGALG00000007356 188 0.984 - - - - - - - - - 0.984 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
26. CLASP2 ENSGALG00000032647 1821 0.984 - - - - - - - 0.984 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
27. TM6SF2 ENSGALG00000029015 109 0.984 - - - - - - - - - 0.984 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
28. SCARF1 2103 0.984 - - - - - - - 0.984 - - scavenger receptor class F member 1, transcript variant X2
29. CNKSR3 ENSGALG00000027159 41 0.984 - - - - - - - - - 0.984 CNKSR family member 3, transcript variant X2
30. PNPT1 ENSGALG00000043545 1306 0.984 - - - - - - - 0.984 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
31. C7H2ORF76 ENSGALG00000012113 1947 0.983 - - - - - - - 0.983 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
32. CCBL2 CCBL2 184 0.983 - - - - - - - - - 0.983
33. CCNI ENSGALG00000011457 3203 0.982 - - - - - - - 0.982 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
34. ASAP2 ENSGALG00000016419 1393 0.982 - - - - - - - 0.982 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
35. AGMO ENSGALG00000010792 76 0.982 - - - - - - - - - 0.982 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
36. DTX2 ENSGALG00000001905 1475 0.982 - - - - - - - - - 0.982 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
37. SLC38A1 ENSGALG00000009698 566 0.981 - - - - - - - - - 0.981 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
38. ENSGALG00000004772 ENSGALG00000004772 173 0.981 - - - - - - - - - 0.981
39. TTI1 ENSGALG00000006791 1218 0.981 - - - - - - - - - 0.981 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
40. NFKBIE ENSGALG00000044525 633 0.981 - - - - - - - - - 0.981 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
41. TRIM3 ENSGALG00000034004 110 0.98 - - - - - - - - - 0.980 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
42. MAP3K3 ENSGALG00000000525 115 0.979 - - - - - - - - - 0.979 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
43. COQ5 ENSGALG00000007185 5614 0.979 - - - - - - - 0.979 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
44. ENSGALG00000018358 ENSGALG00000018358 101 0.979 - - - - - - - - - 0.979
45. IBA57 ENSGALG00000005328 4362 0.978 - - - - - - - 0.978 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
46. BCOR ENSGALG00000016245 85 0.978 - - - - - - - - - 0.978 BCL6 corepressor, transcript variant X8
47. TRMT44 ENSGALG00000015594 1490 0.978 - - - - - - - - - 0.978 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
48. LRRC42 ENSGALG00000010743 384 0.977 - - - - - - - 0.977 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
49. GMFB ENSGALG00000012208 894 0.977 - - - - - - - 0.977 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
50. PTPRE ENSGALG00000009823 250 0.977 - - - - - - - - - 0.977 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
51. PROCR ENSGALG00000006547 645 0.976 - - - - - - - - - 0.976 protein C receptor [Source:NCBI gene;Acc:424867]
52. POLR1E ENSGALG00000005395 8953 0.976 - - - - - - - 0.976 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
53. SENP2 ENSGALG00000031128 1162 0.976 - - - - - - - 0.976 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
54. NGFR ENSGALG00000035950 13452 0.976 - - - - - - - 0.976 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
55. PRKAG2 ENSGALG00000006219 504 0.975 - - - - - - - 0.975 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
56. WBP4 ENSGALG00000016949 5858 0.975 - - - - - - - 0.975 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
57. LMO4 ENSGALG00000006252 3686 0.975 - - - - - - - 0.975 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
58. N4BP2L1 ENSGALG00000017072 1371 0.975 - - - - - - - 0.975 - - NEDD4 binding protein 2 like 1, transcript variant X2
59. ZFPM2 ENSGALG00000040079 942 0.975 - - - - - - - - - 0.975 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
60. FBXL7 ENSGALG00000031947 2480 0.975 - - - - - - - 0.975 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
61. xcc-b100_1894L ENSGALG00000007564 462 0.975 - - - - - - - 0.975 - - UPF0061 protein xcc-b100_1894-like
62. STX6 3297 0.975 - - - - - - - - - 0.975 syntaxin 6
63. ENSGALG00000021835 ENSGALG00000021835 424 0.975 - - - - - - - 0.975 - -
64. RGP1 ENSGALG00000002394 5937 0.975 - - - - - - - - - 0.975 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
65. RFX3 ENSGALG00000010179 305 0.974 - - - - - - - 0.974 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
66. ZNF148 ENSGALG00000012049 365 0.974 - - - - - - - 0.974 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
67. TBC1D16 ENSGALG00000007054 2324 0.974 - - - - - - - 0.974 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
68. ZC3H11A ENSGALG00000000541 2712 0.974 - - - - - - - 0.974 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
69. ENSGALG00000026309 ENSGALG00000026309 360 0.974 - - - - - - - 0.974 - -
70. AGO1 ENSGALG00000002249 125 0.974 - - - - - - - 0.974 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
71. CHGA ENSGALG00000010820 1028 0.974 - - - - - - - 0.974 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
72. BIN1 ENSGALG00000011541 2273 0.974 - - - - - - - 0.974 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
73. FRYL ENSGALG00000014103 314 0.974 - - - - - - - 0.974 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
74. CYB5R3 ENSGALG00000014122 7664 0.973 - - - - - - - 0.973 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
75. ENSGALG00000025773 ENSGALG00000025773 977 0.973 - - - - - - - 0.973 - -
76. C16orf93 C16orf93 3351 0.973 - - - - - - - 0.973 - -
77. TFG ENSGALG00000015299 849 0.973 - - - - - - - - - 0.973 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
78. GHR_1 ENSGALG00000014855 198 0.973 - - - - - - - 0.973 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
79. ENSGALG00000016701 ENSGALG00000016701 418 0.973 - - - - - - - 0.973 - -
80. CLEC3B ENSGALG00000030969 363 0.973 - - - - - - - 0.973 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
81. SLC37A4 ENSGALG00000007716 2263 0.973 - - - - - - - 0.973 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
82. PDHX ENSGALG00000033753 2799 0.972 - - - - - - - 0.972 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
83. GRPEL2 ENSGALG00000002673 105 0.972 - - - - - - - - - 0.972 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
84. CDC37L1 ENSGALG00000014448 2283 0.972 - - - - - - - 0.972 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
85. SERPINB6 ENSGALG00000012866 1582 0.972 - - - - - - - - - 0.972 serpin family B member 6 [Source:NCBI gene;Acc:420895]
86. TBC1D19 ENSGALG00000029673 1868 0.972 - - - - - - - 0.972 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
87. CLIC4 ENSGALG00000001262 11497 0.972 - - - - - - - 0.972 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
88. ALDH6 ALDH6 771 0.972 - - - - - - - 0.972 - -
89. C5H15ORF57 C5H15ORF57 4113 0.972 - - - - - - - 0.972 - -
90. MOB2 ENSGALG00000030499 3658 0.971 - - - - - - - 0.971 - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
91. ECHDC3 ENSGALG00000006690 1299 0.971 - - - - - - - 0.971 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
92. SEMA3C ENSGALG00000040444 5404 0.971 - - - - - - - 0.971 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
93. ENSGALG00000001919 ENSGALG00000001919 531 0.97 - - - - - - - - - 0.970
94. CENPJ ENSGALG00000017148 1415 0.97 - - - - - - - - - 0.970 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
95. TRIM24 ENSGALG00000012823 2725 0.969 - - - - - - - - - 0.969 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
96. GPR155 ENSGALG00000014209 1281 0.969 - - - - - - - 0.969 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
97. SLC35F6 ENSGALG00000016589 5172 0.969 - - - - - - - 0.969 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
98. BOC ENSGALG00000015152 4868 0.969 - - - - - - - 0.969 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
99. SZT2 ENSGALG00000028561 255 0.969 - - - - - - - 0.969 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
100. VAV2 ENSGALG00000002699 503 0.969 - - - - - - - - - 0.969 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]

There are 665 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA