Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCD6IP

Gene Name Gene ID Reads Annotation
PDCD6IP ENSGALG00000033500 580 programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]











Genes with expression patterns similar to PDCD6IP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD6IP ENSGALG00000033500 580 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
2. ELAVL4 ENSGALG00000010533 4978 1 - - - - - - - 1.000 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
3. SNIP1 ENSGALG00000002010 1429 1 - - - - - - - 1.000 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
4. ATP2B4 ENSGALG00000003601 3746 1 - - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
5. ENSGALG00000012250 ENSGALG00000012250 581 1 - - - - - - - 1.000 - -
6. RNF168 ENSGALG00000006392 507 1 - - - - - - - 1.000 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
7. PIGL ENSGALG00000004492 669 1 - - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
8. CASP18 ENSGALG00000008346 23 1 - - - - - - 1.000 - - - initiator caspase [Source:NCBI gene;Acc:693266]
9. FBF1 ENSGALG00000002179 1738 1 - - - - - - - 1.000 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
10. ZNF319 ENSGALG00000000999 1272 1 - - - - - - - 1.000 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
11. FGD6 ENSGALG00000011342 34 1 - - - - - - 1.000 - - - FYVE, RhoGEF and PH domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21740]
12. SPDYA ENSGALG00000017392 503 1 - - - - - - - 1.000 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
13. SLC35D1 ENSGALG00000011121 4456 0.999 - - - - - - - 0.999 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
14. CRELD2 ENSGALG00000008551 2084 0.999 - - - - - - - 0.999 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
15. ALS2 ENSGALG00000008415 2576 0.999 - - - - - - - 0.999 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
16. RFT1 ENSGALG00000001945 2446 0.999 - - - - - - - 0.999 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
17. RAI2 ENSGALG00000016538 1074 0.998 - - - - - - - 0.998 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
18. NVL ENSGALG00000009322 5286 0.997 - - - - - - - 0.997 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
19. RNFT1 ENSGALG00000005205 2888 0.997 - - - - - - - 0.997 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
20. TMEM192 ENSGALG00000009528 2428 0.997 - - - - - - - 0.997 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
21. C6ORF192 C6ORF192 4224 0.996 - - - - - - - 0.996 - -
22. PMP22 ENSGALG00000031425 5358 0.996 - - - - - - - 0.996 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
23. CENPL ENSGALG00000038411 4867 0.996 - - - - - - - 0.996 - - centromere protein L [Source:NCBI gene;Acc:426563]
24. MAP2K2 ENSGALG00000001267 3857 0.995 - - - - - - - 0.995 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
25. ATE1 ENSGALG00000009502 3751 0.995 - - - - - - - 0.995 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
26. NBL1 ENSGALG00000040297 8165 0.994 - - - - - - - 0.994 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
27. IFNAR2 ENSGALG00000041867 1596 0.994 - - - - - - - 0.994 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
28. FUNDC2 ENSGALG00000029585 9334 0.993 - - - - - - - 0.993 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
29. TMEM126A ENSGALG00000014066 6149 0.993 - - - - - - - 0.993 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
30. RCOR3 ENSGALG00000009871 7022 0.992 - - - - - - - 0.992 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
31. TTL ENSGALG00000008614 3991 0.992 - - - - - - - 0.992 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
32. CETN1 ENSGALG00000026741 7243 0.992 - - - - - - - 0.992 - - centrin 1 [Source:NCBI gene;Acc:422668]
33. YAF2 ENSGALG00000009540 8452 0.991 - - - - - - - 0.991 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
34. PPP3R1 ENSGALG00000023648 3417 0.991 - - - - - - - 0.991 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
35. DLC1 ENSGALG00000013715 5297 0.99 - - - - - - - 0.990 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
36. CDCA7 ENSGALG00000040833 7484 0.99 - - - - - - - 0.990 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
37. CRNKL1 ENSGALG00000008429 7280 0.989 - - - - - - - 0.989 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
38. PPM1D ENSGALG00000035610 6530 0.986 - - - - - - - 0.986 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
39. G3BP2 ENSGALG00000010882 21129 0.985 - - - - - - - 0.985 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
40. RBM7 ENSGALG00000007017 8779 0.984 - - - - - - - 0.984 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
41. PDHB ENSGALG00000029576 12254 0.981 - - - - - - - 0.981 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
42. gga-mir-6587 ENSGALG00000026386 9441 0.98 - - - - - - - 0.980 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
43. EXO1 ENSGALG00000010748 7572 0.979 - - - - - - - 0.979 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
44. JSC JSC 7982 0.975 - - - - - - - 0.975 - -
45. KIAA0196 KIAA0196 4011 0.971 - - - - - - - 0.971 - -
46. RFC3 ENSGALG00000017064 7011 0.971 - - - - - - - 0.971 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
47. XPO5 ENSGALG00000010341 24765 0.969 - - - - - - - 0.969 - - exportin 5 [Source:NCBI gene;Acc:421450]
48. NUP107 ENSGALG00000009934 2097 0.965 - - - - - - - 0.965 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
49. INPP5A ENSGALG00000010493 6769 0.961 - - - - - - - 0.961 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
50. GARS ENSGALG00000005694 18264 0.959 - - - - - - - 0.959 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
51. COX7A2L ENSGALG00000037996 13646 0.959 - - - - - - - 0.959 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
52. ANKRD11 ENSGALG00000006222 12327 0.958 - - - - - - - 0.958 - - ankyrin repeat domain 11, transcript variant X2
53. AP2B1 ENSGALG00000042125 13229 0.958 - - - - - - - 0.958 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
54. SBNO1 ENSGALG00000003392 6731 0.958 - - - - - - - 0.958 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
55. SFT2D1 ENSGALG00000020005 10855 0.957 - - - - - - - 0.957 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
56. TPD52 ENSGALG00000040167 9891 0.953 - - - - - - - 0.953 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
57. XRCC5 ENSGALG00000011492 6802 0.941 - - - - - - - 0.941 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
58. MRPL54 ENSGALG00000027611 39450 0.929 - - - - - - - 0.929 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
59. PRTG ENSGALG00000037336 34665 0.917 - - - - - - - 0.917 - - protogenin [Source:NCBI gene;Acc:415407]
60. Sep-02_1 Sep-02_1 19203 0.915 - - - - - - - 0.915 - -
61. PPA2 ENSGALG00000010582 22301 0.914 - - - - - - - 0.914 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
62. ENSGALG00000006278 ENSGALG00000006278 202 0.913 - - 0.913 - - - - - - -
63. TMEM230 ENSGALG00000036876 55 0.913 - - 0.913 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
64. YDJC ENSGALG00000029198 14 0.907 - - 0.907 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
65. CHD4 ENSGALG00000013565 25695 0.907 - - - - - - - 0.907 - - chromodomain helicase DNA binding protein 4
66. ENSGALG00000017396 ENSGALG00000017396 9028 0.906 - - - - - - - 0.906 - -
67. ENSGALG00000000407 ENSGALG00000000407 32 0.906 - - 0.906 - - - - - - -
68. DNAH7 ENSGALG00000007841 32 0.906 - - 0.906 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
69. ZOV3 ZOV3 3267 0.904 - - - - - - - 0.904 - -
70. CDC42EP4 ENSGALG00000023364 9240 0.902 - - - - - - - 0.902 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
71. LRRC56 ENSGALG00000041955 16 0.902 - - 0.902 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
72. SPTSSBL ENSGALG00000026131 70 0.901 - - 0.901 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
73. ANKRD42 8 0.901 - - 0.901 - - - - - - - ankyrin repeat domain 42
74. TNFAIP8L1 ENSGALG00000004266 12611 0.901 - - - - - - - 0.901 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
75. FAM98A ENSGALG00000010428 9585 0.901 - - - - - - - 0.901 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
76. LHX6 ENSGALG00000001347 7 0.901 - - 0.901 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
77. IKBIP ENSGALG00000026284 31 0.9 - - 0.900 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
78. SLC25A39 ENSGALG00000042894 10654 0.899 - - - - - - - 0.899 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
79. ENSGALG00000029120 ENSGALG00000029120 73 0.898 - - 0.898 - - - - - - -
80. PLAG1 ENSGALG00000015407 17 0.897 - - 0.897 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
81. ENSGALG00000026975 ENSGALG00000026975 8 0.896 - - 0.896 - - - - - - -
82. PSMD4 ENSGALG00000028505 16 0.893 - - 0.893 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
83. HOXA9 ENSGALG00000028983 9298 0.892 - - 0.892 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
84. UBE3C ENSGALG00000006461 57 0.89 - - 0.890 - - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
85. SATB2 ENSGALG00000008135 347 0.89 - - 0.890 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
86. XYLT1 ENSGALG00000006757 169 0.887 - - 0.887 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
87. FNDC7 ENSGALG00000001983 24 0.887 - - 0.887 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
88. ZBTB21 ENSGALG00000016147 13 0.886 - - 0.886 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
89. PRKCZ ENSGALG00000001270 12 0.885 - - 0.885 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
90. KIF9 ENSGALG00000005517 70 0.885 - - 0.885 - - - - - - - kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
91. KIAA1549 ENSGALG00000012796 60 0.882 - - 0.882 - - - - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
92. MDM2 ENSGALG00000009942 397 0.875 - - 0.875 - - - - - - - MDM2 proto-oncogene [Source:NCBI gene;Acc:395609]
93. C1orf131 C1orf131 141 0.873 - - 0.873 - - - - - - -
94. LRPPRC ENSGALG00000009967 17091 0.873 - - - - - - - 0.873 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
95. gga-mir-2954 ENSGALG00000026107 462 0.872 - - 0.872 - - - - - - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
96. REEP2 ENSGALG00000017365 338 0.869 - - 0.869 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
97. ENSGALG00000023609 ENSGALG00000023609 6933 0.869 - - - - - - - 0.869 - -
98. SAMSN1 ENSGALG00000040926 88 0.868 - - 0.868 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
99. MMP9 ENSGALG00000006992 78 0.867 - - 0.867 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
100. LOXL1 ENSGALG00000028247 672 0.867 - - 0.867 - - - - - - - lysyl oxidase like 1

There are 228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA