Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCD6

Gene Name Gene ID Reads Annotation
PDCD6 ENSGALG00000013400 7611 programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]











Genes with expression patterns similar to PDCD6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD6 ENSGALG00000013400 7611 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
2. KLHDC2 ENSGALG00000012244 12903 1.743 - - - - - - 0.752 0.991 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
3. STAMBP ENSGALG00000042555 1362 1.729 - - 0.737 - - - - 0.992 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
4. INTS2 ENSGALG00000005269 6966 1.727 - - - - - - 0.733 0.994 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
5. THRAP3 ENSGALG00000002144 21958 1.72 - - - - - - 0.786 0.934 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
6. MAP4K3 ENSGALG00000039720 5124 1.675 - - - - - - 0.700 0.975 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
7. NSUN4 ENSGALG00000010360 3567 1.662 - - - - - - 0.710 0.952 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
8. GLO1 ENSGALG00000010127 31662 1.654 - - - - - - 0.757 0.897 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
9. TRA2B ENSGALG00000006531 40566 1.648 - - 0.818 - - - - 0.830 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
10. DHCR24 ENSGALG00000010798 3963 1.636 - - - - - - 0.712 0.924 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
11. DERL1 ENSGALG00000033950 15074 1.628 - - - - - - 0.725 0.903 - - derlin 1 [Source:NCBI gene;Acc:420350]
12. TAF15 ENSGALG00000002060 12320 1.615 - - - - - - 0.721 0.894 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
13. NCAPD2 ENSGALG00000039448 8658 1.61 - - 0.788 - - - 0.822 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
14. NDUFV2 ENSGALG00000036625 29234 1.604 - - - - - - 0.809 0.795 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
15. TMEM167A ENSGALG00000027332 13862 1.602 - - 0.776 - - - 0.826 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
16. CHORDC1 ENSGALG00000035461 2439 1.59 - - 0.810 - - - 0.780 - - - cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
17. RBM17 ENSGALG00000006332 12656 1.582 - - - - - - 0.762 0.820 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
18. PLEKHB2 ENSGALG00000002169 3832 1.581 - - 0.794 - - - 0.787 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
19. SMC4 ENSGALG00000009553 15715 1.557 - - 0.712 - - - 0.845 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
20. UBE2R2 ENSGALG00000001668 9234 1.545 - - 0.789 - - - 0.756 - - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
21. SPCS1 ENSGALG00000001655 7718 1.536 - - 0.735 - - - 0.801 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
22. AHCTF1 ENSGALG00000010630 4809 1.532 - - 0.750 - - - 0.782 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
23. BAG5 ENSGALG00000031062 4498 1.515 - - 0.716 - - - 0.799 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
24. NDUFC2 ENSGALG00000029172 26136 1.493 - - 0.760 - - - 0.733 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
25. TMEM8A ENSGALG00000026188 3092 1.49 - - 0.716 - - - 0.774 - - - transmembrane protein 8A [Source:HGNC Symbol;Acc:HGNC:17205]
26. BMS1 ENSGALG00000002624 8339 1.465 - - 0.703 - - - 0.762 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
27. SENP6 ENSGALG00000015901 8013 1.461 - - 0.730 - - - 0.731 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
28. ATRIP ENSGALG00000004670 3647 1.459 - - 0.738 - - - 0.721 - - - ATR interacting protein [Source:NCBI gene;Acc:415949]
29. CBLL1 ENSGALG00000038981 6725 1.458 - - 0.701 - - - 0.757 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
30. SPCS3 ENSGALG00000010839 19106 1.457 - - 0.738 - - - 0.719 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
31. URI1 ENSGALG00000004506 6024 1.453 - - 0.730 - - - 0.723 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
32. URB1 ENSGALG00000015887 5854 1.441 - - 0.727 - - - 0.714 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
33. POMP ENSGALG00000017090 5504 1.437 - - 0.721 - - - 0.716 - - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
34. SGCE ENSGALG00000009670 3070 1.43 - - 0.726 - - - 0.704 - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
35. GTF2H3 ENSGALG00000023682 9914 1.42 - - 0.712 - - - 0.708 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
36. PPAT ENSGALG00000013728 7563 0.996 - - - - - - - 0.996 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
37. CWC22 ENSGALG00000009001 5984 0.996 - - - - - - - 0.996 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
38. FAT1 ENSGALG00000013579 6030 0.996 - - - - - - - 0.996 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
39. ADAR ENSGALG00000021475 6004 0.995 - - - - - - - 0.995 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
40. VPS36 ENSGALG00000017026 3658 0.995 - - - - - - - 0.995 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
41. SLC52A3 ENSGALG00000006194 3952 0.995 - - - - - - - 0.995 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
42. SLBP ENSGALG00000015712 5586 0.995 - - - - - - - 0.995 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
43. PHAX ENSGALG00000014691 8114 0.995 - - - - - - - 0.995 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
44. ZNF462 ENSGALG00000015451 12653 0.994 - - - - - - - 0.994 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
45. CTU2 4818 0.994 - - - - - - - 0.994 - - cytosolic thiouridylase subunit 2, transcript variant X3
46. PTK7 ENSGALG00000008609 8081 0.994 - - - - - - - 0.994 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
47. VEGFC ENSGALG00000010847 2197 0.993 - - - - - - - 0.993 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
48. CREB1 ENSGALG00000008494 2219 0.993 - - - - - - - 0.993 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
49. USP30 ENSGALG00000040265 2000 0.993 - - - - - - - 0.993 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
50. C9orf89 C9orf89 3056 0.993 - - - - - - - 0.993 - -
51. TNFRSF21 ENSGALG00000016719 2762 0.993 - - - - - - - 0.993 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
52. RRBP1 ENSGALG00000008676 5376 0.993 - - - - - - - 0.993 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
53. PRRX2 ENSGALG00000028236 1990 0.992 - - - - - - - 0.992 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
54. LMO7 ENSGALG00000016920 3809 0.992 - - - - - - - 0.992 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
55. USP42 ENSGALG00000003378 1392 0.992 - - - - - - - 0.992 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
56. SIN3A ENSGALG00000001644 1141 0.992 - - - - - - - 0.992 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
57. WDFY3 10775 0.991 - - - - - - - 0.991 - - WD repeat and FYVE domain containing 3, transcript variant X7
58. TMEM69 ENSGALG00000010279 716 0.991 - - - - - - - 0.991 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
59. GNA12 ENSGALG00000004368 692 0.991 - - - - - - - 0.991 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
60. ENSGALG00000028413 ENSGALG00000028413 551 0.991 - - - - - - - 0.991 - -
61. TDRD1 ENSGALG00000046180 612 0.991 - - - - - - - 0.991 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
62. GYG1 ENSGALG00000035535 6311 0.99 - - - - - - - 0.990 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
63. ACTR6 ENSGALG00000040976 31271 0.975 - - - - - - - 0.975 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
64. LAMTOR2 ENSGALG00000029881 35356 0.974 - - - - - - - 0.974 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
65. NAA30 ENSGALG00000012098 4681 0.969 - - - - - - - 0.969 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
66. RPL7L1 ENSGALG00000011974 20292 0.961 - - - - - - - 0.961 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
67. BMP4 ENSGALG00000012429 4306 0.954 - - - - - - - 0.954 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
68. CPSF4 ENSGALG00000004714 14353 0.953 - - - - - - - 0.953 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
69. C11orf57 C11orf57 4971 0.95 - - - - - - - 0.950 - -
70. SPATA20 ENSGALG00000006857 3506 0.949 - - - - - - - 0.949 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
71. MGST1 ENSGALG00000013098 17632 0.948 - - - - - - - 0.948 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
72. CSNK2A1 ENSGALG00000006197 41409 0.947 - - - - - - - 0.947 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
73. MCM6 ENSGALG00000012348 12523 0.945 - - - - - - - 0.945 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
74. TIMM23B ENSGALG00000002089 8122 0.941 - - - - - - - 0.941 - - translocase of inner mitochondrial membrane 23 homolog B
75. PDCL3 ENSGALG00000016772 14897 0.941 - - - - - - - 0.941 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
76. HSPA12A ENSGALG00000009248 7783 0.939 - - - - - - - 0.939 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
77. LAPTM4A ENSGALG00000016479 15973 0.939 - - - - - - - 0.939 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
78. FARP1 ENSGALG00000016886 13132 0.936 - - - - - - - 0.936 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
79. MYBL2 ENSGALG00000003503 15875 0.935 - - - - - - - 0.935 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
80. MED6 ENSGALG00000029743 9414 0.931 - - - - - - - 0.931 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
81. ZNF367 ENSGALG00000012629 3215 0.919 - - - - - - - 0.919 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
82. CKAP4 ENSGALG00000012659 36398 0.908 - - - - - - - 0.908 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
83. TMEM199 ENSGALG00000023757 10781 0.888 - - - - - - - 0.888 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
84. FBXO9 ENSGALG00000016320 9600 0.868 - - - - - - - 0.868 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
85. EIF1 ENSGALG00000028517 124882 0.864 - - - - - - - 0.864 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
86. ATP6V0B ENSGALG00000010091 14901 0.864 - - - - - - - 0.864 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
87. YWHAZ ENSGALG00000031387 84985 0.863 - - - - - - 0.863 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
88. REXO2 ENSGALG00000035980 16319 0.858 - - 0.858 - - - - - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
89. KCTD10 ENSGALG00000005138 1191 0.85 - - 0.850 - - - - - - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
90. ANP32E ENSGALG00000039891 35925 0.85 - - - - - - - 0.850 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
91. C11H16ORF80 C11H16ORF80 18673 0.849 - - - - - - 0.849 - - -
92. ATP5MC1 ENSGALG00000001330 37766 0.849 - - - - - - - 0.849 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
93. TXNDC17 ENSGALG00000027950 45004 0.847 - - - - - - 0.847 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
94. N4BP2L2 857 0.845 - - 0.845 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
95. EIF4A2 ENSGALG00000008684 58507 0.843 - - - - - - 0.843 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
96. BZW2 ENSGALG00000010809 29213 0.843 - - 0.843 - - - - - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
97. MAD2L1BP ENSGALG00000027871 7835 0.842 - - - - - - - 0.842 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
98. GTLF3B GTLF3B 5079 0.842 - - - - - - - 0.842 - -
99. RPF2 ENSGALG00000037087 12788 0.841 - - - - - - 0.841 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
100. COMMD10 ENSGALG00000002308 7442 0.839 - - - - - - 0.839 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]

There are 746 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA