Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCD5

Gene Name Gene ID Reads Annotation
PDCD5 ENSGALG00000004648 22576 programmed cell death 5 [Source:NCBI gene;Acc:415765]











Genes with expression patterns similar to PDCD5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD5 ENSGALG00000004648 22576 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 5 [Source:NCBI gene;Acc:415765]
2. RPS17 ENSGALG00000002157 142120 1.627 - - - - 0.801 - - 0.826 - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
3. NUDC ENSGALG00000000895 17844 1.57 - - - - 0.732 - 0.838 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
4. ENSGALG00000000508 ENSGALG00000000508 19203 0.922 - - - - - - 0.922 - - -
5. TOP1 ENSGALG00000003681 30214 0.916 - - - - - - 0.916 - - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
6. ARL5B ENSGALG00000008557 12887 0.907 - - - - - - 0.907 - - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
7. COPB1 ENSGALG00000006015 16518 0.904 - - - - - - 0.904 - - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
8. MRPS33 ENSGALG00000028879 17966 0.901 - - - - - - 0.901 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
9. TBCA ENSGALG00000004353 18510 0.897 - - - - - - 0.897 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
10. TMED5 27507 0.896 - - - - - - 0.896 - - - transmembrane p24 trafficking protein 5
11. EPRS ENSGALG00000009598 26412 0.895 - - - - - - 0.895 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
12. RPL22L1 ENSGALG00000009312 59030 0.894 - - - - - - 0.894 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
13. PPP4R2 ENSGALG00000007810 15127 0.894 - - - - - - 0.894 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
14. RSU1 ENSGALG00000040891 12561 0.886 - - - - - - 0.886 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
15. ACAD9 ENSGALG00000005034 22100 0.884 - - - - - - 0.884 - - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
16. SKA2 ENSGALG00000005090 24296 0.882 - - - - - - 0.882 - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
17. ITM2A ENSGALG00000004107 29262 0.881 - - - - - - 0.881 - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
18. KRR1 ENSGALG00000010227 11783 0.878 - - - - 0.878 - - - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
19. THOC7 ENSGALG00000007299 38227 0.878 - - - - - - 0.878 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
20. PAIP2 11856 0.875 - - - - - - 0.875 - - - poly(A) binding protein interacting protein 2, transcript variant X1
21. EXOC7 ENSGALG00000002050 9612 0.872 - - - - - - 0.872 - - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
22. BCAS2 ENSGALG00000002002 22536 0.869 - - - - - - 0.869 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
23. ATP5H 53898 0.867 - - - - - - 0.867 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
24. HAT1 ENSGALG00000009525 24864 0.867 - - - - - - 0.867 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
25. COX7A2 ENSGALG00000015906 62347 0.863 - - - - - - 0.863 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
26. SEC31A ENSGALG00000040484 20190 0.863 - - - - - - 0.863 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
27. NLK ENSGALG00000005699 9066 0.863 - - - - - - 0.863 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
28. ACP1 ENSGALG00000016363 10636 0.861 - - - - - - 0.861 - - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
29. CHD4 ENSGALG00000013565 25695 0.861 - - - - - - 0.861 - - - chromodomain helicase DNA binding protein 4
30. ENSGALG00000007096 ENSGALG00000007096 14595 0.86 - - - - - - 0.860 - - -
31. OLA1 ENSGALG00000009325 26414 0.857 - - - - - - 0.857 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
32. ARHGDIB ENSGALG00000011738 39492 0.853 - - - - - - 0.853 - - - Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
33. RBF RBF 49711 0.851 - - - - - - 0.851 - - -
34. MESDC2 MESDC2 11010 0.848 - - - - - - 0.848 - - -
35. FH ENSGALG00000013165 13669 0.845 - - - - - - 0.845 - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
36. EMC3 ENSGALG00000003738 10363 0.843 - - - - - - 0.843 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
37. VCP ENSGALG00000001986 23679 0.839 - - - - - - 0.839 - - - valosin containing protein [Source:NCBI gene;Acc:427410]
38. COMMD3 ENSGALG00000007900 8629 0.836 - - - - - - 0.836 - - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
39. CRHOB CRHOB 27139 0.836 - - - - - - 0.836 - - -
40. NDUFB6 ENSGALG00000002033 45494 0.836 - - - - - - 0.836 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
41. TBP ENSGALG00000011171 5759 0.835 - - - - - - 0.835 - - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
42. ENSGALG00000028938 ENSGALG00000028938 18616 0.831 - - - - - - 0.831 - - -
43. FAM168B ENSGALG00000002172 12162 0.831 - - - - - - 0.831 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
44. RBM5 30998 0.828 - - - - - - - 0.828 - - RNA binding motif protein 5, transcript variant X1
45. CRHOA CRHOA 162675 0.827 - - - - 0.827 - - - - -
46. SPTAN1 ENSGALG00000004719 20251 0.826 - - - - - - 0.826 - - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
47. COX5A ENSGALG00000014121 55281 0.826 - - - - - - 0.826 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
48. ACTR3 ENSGALG00000012159 16020 0.825 - - - - - - 0.825 - - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
49. ABCF2 ENSGALG00000034573 15639 0.823 - - - - - - 0.823 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
50. CSNK2A1 ENSGALG00000006197 41409 0.822 - - - - - - 0.822 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
51. HNRNPAB ENSGALG00000014381 41009 0.821 - - - - 0.821 - - - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
52. ETFDH ENSGALG00000009442 7671 0.814 - - - - - - 0.814 - - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
53. ZRANB2 ENSGALG00000011340 18994 0.814 - - - - - - 0.814 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
54. PCBP4 ENSGALG00000027695 7937 0.814 - - - - - - 0.814 - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
55. CHDZ CHDZ 10381 0.812 - - - - - - 0.812 - - -
56. C26H6ORF125 ENSGALG00000002881 15827 0.811 - - - - - - 0.811 - - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
57. NOC3L ENSGALG00000035667 7441 0.809 - - - - - - 0.809 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
58. MRTO4 ENSGALG00000003991 13642 0.807 - - - - - - 0.807 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
59. C1H21ORF91 ENSGALG00000028290 5550 0.806 - - - - - - 0.806 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
60. YAF2 ENSGALG00000009540 8452 0.806 - - - - - - 0.806 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
61. MRPS10 ENSGALG00000009890 9157 0.805 - - - - - - 0.805 - - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
62. TPP2 ENSGALG00000016865 7509 0.804 - - - - - - 0.804 - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
63. PODXL ENSGALG00000006409 30676 0.802 - - - - - - 0.802 - - - podocalyxin like [Source:NCBI gene;Acc:395755]
64. DYNLT1 ENSGALG00000019979 38176 0.798 - - - - - - 0.798 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
65. MAEA ENSGALG00000013310 13230 0.798 - - - - - - 0.798 - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
66. FNDC3AL ENSGALG00000004169 4980 0.797 - - - - - - 0.797 - - - fibronectin type III domain containing 3A-like, transcript variant X3
67. LDHB ENSGALG00000035836 169726 0.797 - - - - 0.797 - - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
68. DAK DAK 13208 0.795 - - - - - - 0.795 - - -
69. LOC427439 ENSGALG00000003605 9312 0.791 - - - - - - 0.791 - - - Nipped-B homolog-like, transcript variant X1
70. PAFAH1B1 ENSGALG00000005834 23532 0.789 - - - - - - 0.789 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
71. XPO6 ENSGALG00000035360 7042 0.785 - - - - - - 0.785 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
72. MRPS6 ENSGALG00000027579 8225 0.782 - - - - - - 0.782 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
73. PARP16 ENSGALG00000007365 9467 0.782 - - - - - - 0.782 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
74. ADD3 ENSGALG00000008542 13814 0.781 - - - - - - 0.781 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
75. TCP1 ENSGALG00000011637 73216 0.78 - - - - 0.780 - - - - - t-complex 1 [Source:NCBI gene;Acc:421586]
76. DESI2 ENSGALG00000010678 4590 0.779 - - - - - - 0.779 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
77. PPA1 ENSGALG00000004442 33355 0.779 - - - - - - 0.779 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
78. EXOSC2 ENSGALG00000040373 24275 0.778 - - - - - - 0.778 - - - exosome component 2 [Source:NCBI gene;Acc:417182]
79. FUBP3 ENSGALG00000003941 12667 0.776 - - - - - - 0.776 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
80. TMEM128 ENSGALG00000014992 6567 0.774 - - - - - - 0.774 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
81. RWDD1 ENSGALG00000014953 9986 0.773 - - - - - - 0.773 - - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
82. SLC35F1 ENSGALG00000029011 14728 0.772 - - - - - - 0.772 - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
83. RPL21 ENSGALG00000027035 244232 0.772 - - - - - - 0.772 - - - ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
84. MT-CYB MT-CYB 882159 0.77 - - - - 0.770 - - - - -
85. IST1 ENSGALG00000000811 10527 0.77 - - - - - - 0.770 - - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
86. ACTL6A ENSGALG00000009061 13013 0.77 - - - - - - 0.770 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
87. PSMC6 ENSGALG00000012408 52068 0.769 - - - - - - 0.769 - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
88. TOMM70A TOMM70A 24085 0.767 - - - - 0.767 - - - - -
89. ODC1 ENSGALG00000016444 20119 0.764 - - - - - - 0.764 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
90. DPY30 ENSGALG00000010621 6818 0.764 - - - - - - 0.764 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
91. ACAT2 ENSGALG00000011659 12825 0.763 - - - - - - 0.763 - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
92. CCDC104 CCDC104 6584 0.763 - - - - - - 0.763 - - -
93. EFNB2 ENSGALG00000029175 5664 0.762 - - - - 0.762 - - - - - ephrin B2 [Source:NCBI gene;Acc:395625]
94. SLC1A3 ENSGALG00000003582 2283 0.761 - - - - 0.761 - - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
95. COX7B ENSGALG00000007863 59194 0.76 - - - - - - - 0.760 - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
96. ATP6V1D ENSGALG00000009570 9827 0.76 - - - - - - 0.760 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
97. TRAF3IP1 ENSGALG00000004236 7094 0.76 - - - - - - 0.760 - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
98. EIF4E ENSGALG00000042112 27720 0.759 - - - - - - 0.759 - - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
99. ARID4B ENSGALG00000034003 5364 0.758 - - - - 0.758 - - - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
100. CWC22 ENSGALG00000009001 5984 0.758 - - - - - - 0.758 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]

There are 61 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA