Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCD4

Gene Name Gene ID Reads Annotation
PDCD4 ENSGALG00000008700 574 programmed cell death 4 [Source:NCBI gene;Acc:374191]











Genes with expression patterns similar to PDCD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD4 ENSGALG00000008700 574 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 4 [Source:NCBI gene;Acc:374191]
2. PHF2 ENSGALG00000039208 2003 2.501 - - 0.879 - - - - - 0.720 0.902 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
3. CEP70 ENSGALG00000012087 7992 2.481 - - 0.857 - - - - - 0.850 0.774 centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
4. TRIM3 ENSGALG00000034004 110 1.96 - - - - - - - 1.000 - 0.960 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
5. ATP2B2 ENSGALG00000030908 584 1.916 - - 0.944 - - - - - - 0.972 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
6. DLX5 ENSGALG00000009129 1395 1.868 - - 0.966 - - - - - - 0.902 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
7. PCMTD2 ENSGALG00000005901 1833 1.828 - - 0.882 - - - - - - 0.946 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
8. RASSF8 ENSGALG00000014041 850 1.825 - - 0.887 - - - - - - 0.938 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
9. MAN1A1 ENSGALG00000014878 1061 1.808 - - 0.923 - - - - - - 0.885 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
10. COTL1 ENSGALG00000017644 81 1.792 - - - - - - - 1.000 0.792 - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
11. ZNF276 ENSGALG00000000513 2410 1.78 - - 0.891 - - - - - - 0.889 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
12. DLG3 ENSGALG00000041900 3016 1.777 - - 0.922 - - - - - 0.855 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
13. AHSA2 1504 1.77 - - - - - - - - 0.869 0.901 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
14. RAB34 ENSGALG00000026315 1193 1.766 - - 0.799 - - - - - - 0.967 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
15. SOSTDC1 ENSGALG00000036836 1081 1.751 - - - - - - - - 0.816 0.935 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
16. NAT9 ENSGALG00000007723 2098 1.742 - - 0.923 - - - - - - 0.819 N-acetyltransferase 9 (putative), transcript variant X7
17. TYSND1 ENSGALG00000033807 716 1.734 - - - - - - - - 0.774 0.960 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
18. S100A11 ENSGALG00000036711 23454 1.733 - - 0.848 - - - - - - 0.885 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
19. EP3 EP3 741 1.729 - - - - - - - - 0.783 0.946
20. RNF220 ENSGALG00000010109 3114 1.721 - - 0.789 - - - - - - 0.932 ring finger protein 220 [Source:NCBI gene;Acc:424580]
21. RGP1 ENSGALG00000002394 5937 1.718 - - 0.754 - - - - - - 0.964 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
22. PON2 ENSGALG00000009689 1416 1.695 - - 0.839 - - - - - - 0.856 paraoxonase 2 [Source:NCBI gene;Acc:395830]
23. FBXL17 ENSGALG00000000276 2443 1.686 - - 0.873 - - - - - - 0.813 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
24. CCNB3 ENSGALG00000025810 2115 1.686 - - 0.911 - - - - - - 0.775 cyclin B3 [Source:NCBI gene;Acc:396167]
25. PTCHD1 ENSGALG00000016358 3882 1.68 - - 0.756 - - - - - - 0.924 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
26. FURIN ENSGALG00000008341 2609 1.672 - - 0.870 - - - - - - 0.802 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
27. AK6 ENSGALG00000020534 4791 1.664 - - 0.762 - - - - - - 0.902 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
28. ZNF423 ENSGALG00000003891 103 1.664 - - 0.941 - - - - 0.723 - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
29. MORN4 ENSGALG00000006149 7772 1.663 - - 0.792 - - - - - - 0.871 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
30. MCFD2 ENSGALG00000010017 8905 1.657 - - - - - - - - 0.774 0.883 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
31. REXO4 ENSGALG00000030609 2926 1.645 - - 0.807 - - - - - 0.838 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
32. METTL6 ENSGALG00000040665 4467 1.644 - - 0.934 - - - - - - 0.710 methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
33. PTPN11 ENSGALG00000004821 2658 1.638 - - 0.779 - - - - - - 0.859 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
34. ENSGALG00000028359 ENSGALG00000028359 479 1.634 - - 0.886 - - - - - - 0.748
35. GARNL3 ENSGALG00000000847 3423 1.634 - - 0.794 - - - - - - 0.840 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
36. ARHGAP11A ENSGALG00000009731 6817 1.634 - - 0.747 - - - - - - 0.887 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
37. BSDC1 ENSGALG00000003405 3701 1.601 - - - - - - - - 0.754 0.847 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
38. PHIP ENSGALG00000015889 2348 1.599 - - 0.877 - - - - - - 0.722 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
39. MAST4 ENSGALG00000014784 4153 1.584 - - 0.865 - - - - - - 0.719 microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
40. FOXM1 ENSGALG00000013420 2274 1.569 - - 0.801 - - - - - 0.768 - forkhead box M1 [Source:NCBI gene;Acc:430534]
41. CSTF3 ENSGALG00000011685 4711 1.568 - - - - - 0.737 - - - 0.831 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
42. ATPAF1 ENSGALG00000010444 3677 1.566 - - 0.802 - - - - - - 0.764 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
43. CCT7 ENSGALG00000016088 2824 1.563 - - 0.857 - - - - - - 0.706 chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
44. HP1BP3 ENSGALG00000010079 33723 1.546 - - 0.802 - - - - - - 0.744 heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
45. ZNF395 ENSGALG00000034140 1868 1.54 - - 0.838 - - - - - 0.702 - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
46. MYO9B ENSGALG00000003717 746 1.533 - - 0.746 - - - - - - 0.787 myosin IXB [Source:NCBI gene;Acc:420135]
47. DDX52 ENSGALG00000005489 6311 1.516 - - 0.804 - - - - - - 0.712 DExD-box helicase 52 [Source:NCBI gene;Acc:417660]
48. SMARCD2 ENSGALG00000029304 11867 1.503 - - 0.712 - - - - - 0.791 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
49. TOP2B ENSGALG00000011300 25048 1.493 - - 0.738 - - - - - - 0.755 DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
50. TBC1D12 ENSGALG00000034044 5588 1.469 - - 0.752 - - - - - 0.717 - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
51. ENSGALG00000020092 ENSGALG00000020092 3067 1.464 - - 0.705 - - - - - - 0.759
52. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
53. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
54. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
55. RMST RMST 2 1 - - - - - - - 1.000 - -
56. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
57. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
58. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
59. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
60. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
61. MUT ENSGALG00000016697 43 1 - - - - - - - 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
62. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
63. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
64. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
65. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
66. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
67. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
68. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
69. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
70. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
71. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
72. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
73. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
74. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
75. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
76. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
77. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
78. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
79. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
80. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
81. NMNAT3 ENSGALG00000026187 11 1 - - - - - - - 1.000 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
82. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
83. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
84. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
85. FLT4 ENSGALG00000005802 5 1 - - - - - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
86. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
87. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
88. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
89. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
90. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
91. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
92. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
93. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
94. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
95. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
96. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
97. CFTII CFTII 6 1 - - - - - - - 1.000 - -
98. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
99. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
100. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]

There are 1110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA