Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PDCD4

Gene Name Gene ID Reads Annotation
PDCD4 ENSGALG00000008700 574 programmed cell death 4 [Source:NCBI gene;Acc:374191]











Genes with expression patterns similar to PDCD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD4 ENSGALG00000008700 574 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 4 [Source:NCBI gene;Acc:374191]
2. PHF2 ENSGALG00000039208 2003 2.501 - - 0.879 - - - - - 0.720 0.902 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
3. CEP70 ENSGALG00000012087 7992 2.481 - - 0.857 - - - - - 0.850 0.774 centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
4. TRIM3 ENSGALG00000034004 110 1.96 - - - - - - - 1.000 - 0.960 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
5. ATP2B2 ENSGALG00000030908 584 1.916 - - 0.944 - - - - - - 0.972 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
6. DLX5 ENSGALG00000009129 1395 1.868 - - 0.966 - - - - - - 0.902 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
7. PCMTD2 ENSGALG00000005901 1833 1.828 - - 0.882 - - - - - - 0.946 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
8. RASSF8 ENSGALG00000014041 850 1.825 - - 0.887 - - - - - - 0.938 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
9. MAN1A1 ENSGALG00000014878 1061 1.808 - - 0.923 - - - - - - 0.885 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
10. COTL1 ENSGALG00000017644 81 1.792 - - - - - - - 1.000 0.792 - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
11. ZNF276 ENSGALG00000000513 2410 1.78 - - 0.891 - - - - - - 0.889 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
12. DLG3 ENSGALG00000041900 3016 1.777 - - 0.922 - - - - - 0.855 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
13. AHSA2 1504 1.77 - - - - - - - - 0.869 0.901 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
14. RAB34 ENSGALG00000026315 1193 1.766 - - 0.799 - - - - - - 0.967 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
15. SOSTDC1 ENSGALG00000036836 1081 1.751 - - - - - - - - 0.816 0.935 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
16. NAT9 ENSGALG00000007723 2098 1.742 - - 0.923 - - - - - - 0.819 N-acetyltransferase 9 (putative), transcript variant X7
17. TYSND1 ENSGALG00000033807 716 1.734 - - - - - - - - 0.774 0.960 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
18. S100A11 ENSGALG00000036711 23454 1.733 - - 0.848 - - - - - - 0.885 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
19. EP3 EP3 741 1.729 - - - - - - - - 0.783 0.946
20. RNF220 ENSGALG00000010109 3114 1.721 - - 0.789 - - - - - - 0.932 ring finger protein 220 [Source:NCBI gene;Acc:424580]
21. RGP1 ENSGALG00000002394 5937 1.718 - - 0.754 - - - - - - 0.964 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
22. PON2 ENSGALG00000009689 1416 1.695 - - 0.839 - - - - - - 0.856 paraoxonase 2 [Source:NCBI gene;Acc:395830]
23. CCNB3 ENSGALG00000025810 2115 1.686 - - 0.911 - - - - - - 0.775 cyclin B3 [Source:NCBI gene;Acc:396167]
24. FBXL17 ENSGALG00000000276 2443 1.686 - - 0.873 - - - - - - 0.813 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
25. PTCHD1 ENSGALG00000016358 3882 1.68 - - 0.756 - - - - - - 0.924 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
26. FURIN ENSGALG00000008341 2609 1.672 - - 0.870 - - - - - - 0.802 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
27. AK6 ENSGALG00000020534 4791 1.664 - - 0.762 - - - - - - 0.902 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
28. ZNF423 ENSGALG00000003891 103 1.664 - - 0.941 - - - - 0.723 - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
29. MORN4 ENSGALG00000006149 7772 1.663 - - 0.792 - - - - - - 0.871 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
30. MCFD2 ENSGALG00000010017 8905 1.657 - - - - - - - - 0.774 0.883 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
31. REXO4 ENSGALG00000030609 2926 1.645 - - 0.807 - - - - - 0.838 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
32. METTL6 ENSGALG00000040665 4467 1.644 - - 0.934 - - - - - - 0.710 methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
33. PTPN11 ENSGALG00000004821 2658 1.638 - - 0.779 - - - - - - 0.859 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
34. GARNL3 ENSGALG00000000847 3423 1.634 - - 0.794 - - - - - - 0.840 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
35. ENSGALG00000028359 ENSGALG00000028359 479 1.634 - - 0.886 - - - - - - 0.748
36. ARHGAP11A ENSGALG00000009731 6817 1.634 - - 0.747 - - - - - - 0.887 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
37. BSDC1 ENSGALG00000003405 3701 1.601 - - - - - - - - 0.754 0.847 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
38. PHIP ENSGALG00000015889 2348 1.599 - - 0.877 - - - - - - 0.722 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
39. MAST4 ENSGALG00000014784 4153 1.584 - - 0.865 - - - - - - 0.719 microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
40. FOXM1 ENSGALG00000013420 2274 1.569 - - 0.801 - - - - - 0.768 - forkhead box M1 [Source:NCBI gene;Acc:430534]
41. CSTF3 ENSGALG00000011685 4711 1.568 - - - - - 0.737 - - - 0.831 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
42. ATPAF1 ENSGALG00000010444 3677 1.566 - - 0.802 - - - - - - 0.764 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
43. CCT7 ENSGALG00000016088 2824 1.563 - - 0.857 - - - - - - 0.706 chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
44. HP1BP3 ENSGALG00000010079 33723 1.546 - - 0.802 - - - - - - 0.744 heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
45. ZNF395 ENSGALG00000034140 1868 1.54 - - 0.838 - - - - - 0.702 - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
46. MYO9B ENSGALG00000003717 746 1.533 - - 0.746 - - - - - - 0.787 myosin IXB [Source:NCBI gene;Acc:420135]
47. DDX52 ENSGALG00000005489 6311 1.516 - - 0.804 - - - - - - 0.712 DExD-box helicase 52 [Source:NCBI gene;Acc:417660]
48. SMARCD2 ENSGALG00000029304 11867 1.503 - - 0.712 - - - - - 0.791 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
49. TOP2B ENSGALG00000011300 25048 1.493 - - 0.738 - - - - - - 0.755 DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
50. TBC1D12 ENSGALG00000034044 5588 1.469 - - 0.752 - - - - - 0.717 - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
51. ENSGALG00000020092 ENSGALG00000020092 3067 1.464 - - 0.705 - - - - - - 0.759
52. BAFF BAFF 40 1 - - - - - - - 1.000 - -
53. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
54. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
55. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
56. ANKRD31 46 1 - - - - - - - 1.000 - - ankyrin repeat domain 31, transcript variant X2
57. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
58. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
59. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
60. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
61. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
62. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
63. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
64. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
65. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
66. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
67. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
68. gga-mir-218-1 ENSGALG00000018327 3 1 - - - - - - - 1.000 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
69. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
70. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
71. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
72. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
73. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
74. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
75. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
76. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
77. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
78. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
79. DMGDH ENSGALG00000004491 15 1 - - - - - - - 1.000 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
80. DENND5A ENSGALG00000005840 54 1 - - - - - - - 1.000 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
81. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
82. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
83. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
84. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
85. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
86. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
87. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
88. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
89. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
90. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
91. RAD54L ENSGALG00000010356 7 1 - - - - - - - 1.000 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
92. ALG12 ENSGALG00000008539 20 1 - - - - - - - 1.000 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
93. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
94. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
95. LRCH1 ENSGALG00000016990 17 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
96. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
97. ABCG1 ENSGALG00000016164 10 1 - - - - - - - 1.000 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
98. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
99. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - - - 1.000 - -
100. SKI ENSGALG00000001229 50 1 - - - - - - - 1.000 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]

There are 1110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA