Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDCD11

Gene Name Gene ID Reads Annotation
PDCD11 ENSGALG00000008265 8665 programmed cell death 11, transcript variant X2











Genes with expression patterns similar to PDCD11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDCD11 ENSGALG00000008265 8665 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 11, transcript variant X2
2. ACTR3 ENSGALG00000012159 16020 1.639 - - - - - - 0.854 0.785 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
3. GPATCH1 ENSGALG00000004839 6455 1.534 - - 0.720 - - - 0.814 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
4. TBCA ENSGALG00000004353 18510 1.499 - - - - - - 0.789 0.710 - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
5. C4H8ORF40 C4H8ORF40 6145 0.982 - - - - - - - 0.982 - -
6. ENSGALG00000009771 ENSGALG00000009771 10273 0.943 - - - - - - - 0.943 - -
7. RUNX1T1 ENSGALG00000033091 17529 0.943 - - - - - - - 0.943 - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
8. DYNLL1 ENSGALG00000020999 7751 0.935 - - - - - - - 0.935 - - dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476]
9. PAFAH1B1 ENSGALG00000005834 23532 0.93 - - - - - - 0.930 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
10. RBM25 ENSGALG00000009332 10842 0.916 - - - - - - 0.916 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
11. NCBP2_1 ENSGALG00000006843 7170 0.908 - - - - - - 0.908 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
12. WDR36 ENSGALG00000000247 11277 0.906 - - - - - - 0.906 - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
13. PPA1 ENSGALG00000004442 33355 0.902 - - - - - - 0.902 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
14. RBF RBF 49711 0.899 - - - - - - 0.899 - - -
15. RAB5A ENSGALG00000011272 17767 0.896 - - - - - - 0.896 - - - RAB5A, member RAS oncogene family [Source:NCBI gene;Acc:420649]
16. ODC1 ENSGALG00000016444 20119 0.893 - - - - - - 0.893 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
17. EPRS ENSGALG00000009598 26412 0.892 - - - - - - 0.892 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
18. MFAP3 ENSGALG00000004040 6951 0.892 - - - - - - 0.892 - - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
19. MPHOSPH10 ENSGALG00000003906 7029 0.882 - - - - - - 0.882 - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
20. UTRN ENSGALG00000012256 9980 0.882 - - - - - - - 0.882 - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
21. COX7A2 ENSGALG00000015906 62347 0.879 - - - - - - 0.879 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
22. IPO11 ENSGALG00000014740 4922 0.878 - - - - - - 0.878 - - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
23. ADD3 ENSGALG00000008542 13814 0.878 - - - - - - 0.878 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
24. ATP6V1D ENSGALG00000009570 9827 0.878 - - - - - - 0.878 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
25. DAK DAK 13208 0.876 - - - - - - 0.876 - - -
26. PLOD1 ENSGALG00000004531 8256 0.875 - - - - - - 0.875 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
27. SPRED1 ENSGALG00000028203 6520 0.874 - - - - - - 0.874 - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
28. IST1 ENSGALG00000000811 10527 0.871 - - - - - - 0.871 - - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
29. CHCHD4 ENSGALG00000006328 5860 0.87 - - - - - - 0.870 - - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
30. BIRC5 ENSGALG00000008713 46856 0.866 - - - - - - 0.866 - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
31. AIMP1 ENSGALG00000010553 17994 0.866 - - - - - - 0.866 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
32. ASB3 ENSGALG00000008176 5422 0.866 - - - - - - 0.866 - - - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
33. OTUD6B ENSGALG00000041337 15657 0.863 - - - - - - - 0.863 - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
34. CHDZ CHDZ 10381 0.863 - - - - - - 0.863 - - -
35. SEC31A ENSGALG00000040484 20190 0.861 - - - - - - 0.861 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
36. WDR5 ENSGALG00000002659 13008 0.861 - - - - - - 0.861 - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
37. FNDC3AL ENSGALG00000004169 4980 0.858 - - - - - - 0.858 - - - fibronectin type III domain containing 3A-like, transcript variant X3
38. MND1 ENSGALG00000009212 11765 0.856 - - - - - - 0.856 - - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
39. NDUFB6 ENSGALG00000002033 45494 0.856 - - - - - - 0.856 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
40. RNF130 ENSGALG00000005820 13797 0.855 - - - - - - 0.855 - - - ring finger protein 130 [Source:HGNC Symbol;Acc:HGNC:18280]
41. VPS4B ENSGALG00000012879 6720 0.855 - - - - - - 0.855 - - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
42. TRAF3IP1 ENSGALG00000004236 7094 0.855 - - - - - - 0.855 - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
43. NECAP2 ENSGALG00000003745 4899 0.853 - - - - - - 0.853 - - - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
44. NUDC ENSGALG00000000895 17844 0.853 - - - - - - 0.853 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
45. SKIV2L2 ENSGALG00000014709 2926 0.852 - - - - - - 0.852 - - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
46. MKI67 ENSGALG00000025996 28136 0.852 - - - - - - 0.852 - - - marker of proliferation Ki-67, transcript variant X3
47. RWDD1 ENSGALG00000014953 9986 0.851 - - - - - - 0.851 - - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
48. LGMN ENSGALG00000010811 7401 0.85 - - - - - - 0.850 - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
49. SPTAN1 ENSGALG00000004719 20251 0.848 - - - - - - 0.848 - - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
50. TCF7L2 ENSGALG00000008883 13688 0.848 - - - - - - 0.848 - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
51. RBM26 ENSGALG00000016910 13769 0.845 - - - - - - 0.845 - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
52. IFITM3 ENSGALG00000026970 4738 0.843 - - - - - - 0.843 - - - Gallus gallus interferon-induced transmembrane protein 3 (IFITM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001350061]
53. PARP16 ENSGALG00000007365 9467 0.843 - - - - - - 0.843 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
54. FUBP3 ENSGALG00000003941 12667 0.843 - - - - - - 0.843 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
55. DPY30 ENSGALG00000010621 6818 0.842 - - - - - - 0.842 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
56. C2orf47 C2orf47 17769 0.841 - - - - - - 0.841 - - -
57. MRPS6 ENSGALG00000027579 8225 0.84 - - - - - - 0.840 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
58. C1H21ORF91 ENSGALG00000028290 5550 0.839 - - - - - - 0.839 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
59. TRIP11 ENSGALG00000010763 3146 0.838 - - - - - - 0.838 - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
60. EMC3 ENSGALG00000003738 10363 0.838 - - - - - - 0.838 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
61. FAM49A ENSGALG00000016463 6345 0.838 - - - - - - 0.838 - - - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
62. ENSGALG00000028938 ENSGALG00000028938 18616 0.836 - - - - - - 0.836 - - -
63. STOML2 STOML2 15566 0.834 - - - - - - 0.834 - - -
64. FAM172A ENSGALG00000014661 10565 0.834 - - - - - - 0.834 - - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
65. NLK ENSGALG00000005699 9066 0.833 - - - - - - 0.833 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
66. CCDC104 CCDC104 6584 0.833 - - - - - - 0.833 - - -
67. SLC4A3 ENSGALG00000011224 2161 0.832 - - - - - - 0.832 - - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
68. UTP18 ENSGALG00000002985 7129 0.832 - - - - - - 0.832 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
69. ACAT2 ENSGALG00000011659 12825 0.831 - - - - - - 0.831 - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
70. BOD1L1 ENSGALG00000026470 9250 0.831 - - - - - - 0.831 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
71. FAM162A ENSGALG00000007378 8290 0.831 - - - - - - 0.831 - - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
72. ACTL6A ENSGALG00000009061 13013 0.831 - - - - - - 0.831 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
73. HSPA12A ENSGALG00000009248 7783 0.829 - - - - - - 0.829 - - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
74. ATP6V0B ENSGALG00000010091 14901 0.829 - - - - - - 0.829 - - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
75. DLC1 ENSGALG00000013715 5297 0.828 - - - - - - 0.828 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
76. TARS ENSGALG00000003288 12702 0.828 - - - - - - 0.828 - - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
77. PEX3 ENSGALG00000013777 3158 0.828 - - - - - - 0.828 - - - peroxisomal biogenesis factor 3
78. FUT8 ENSGALG00000036443 5589 0.827 - - - - - - 0.827 - - - fucosyltransferase 8 [Source:NCBI gene;Acc:423178]
79. XPC ENSGALG00000006357 2484 0.827 - - - - - - 0.827 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
80. PAIP2 11856 0.824 - - - - - - 0.824 - - - poly(A) binding protein interacting protein 2, transcript variant X1
81. YAF2 ENSGALG00000009540 8452 0.824 - - - - - - 0.824 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
82. ACOT7 ENSGALG00000000652 7976 0.824 - - - - - - 0.824 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
83. EXOC7 ENSGALG00000002050 9612 0.824 - - - - - - 0.824 - - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
84. BDH1_1 ENSGALG00000023601 6109 0.823 - - - - - - 0.823 - - - 3-hydroxybutyrate dehydrogenase, type 1
85. SFXN4 ENSGALG00000009350 3899 0.822 - - - - - - 0.822 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
86. HAT1 ENSGALG00000009525 24864 0.822 - - - - - - 0.822 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
87. CUEDC2 ENSGALG00000005687 8162 0.822 - - - - - - 0.822 - - - CUE domain containing 2 [Source:NCBI gene;Acc:423761]
88. LRIG2 ENSGALG00000001733 2980 0.822 - - - - - - 0.822 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
89. CHCHD10 ENSGALG00000028810 10389 0.821 - - - - - - 0.821 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
90. MKRN1 ENSGALG00000012852 6907 0.82 - - - - - - 0.820 - - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
91. TRAPPC3 ENSGALG00000002284 23302 0.82 - - - - - - 0.820 - - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
92. MNAT1 ENSGALG00000011910 6809 0.82 - - - - - - 0.820 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
93. ZRANB2 ENSGALG00000011340 18994 0.82 - - - - - - 0.820 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
94. MRTO4 ENSGALG00000003991 13642 0.82 - - - - - - 0.820 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
95. PAXBP1 ENSGALG00000036833 5573 0.82 - - - - - - 0.820 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
96. BCKDHB ENSGALG00000040702 9373 0.82 - - - - - - - 0.820 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
97. AKAP9 ENSGALG00000040724 7446 0.819 - - - - - - 0.819 - - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
98. PHKG1 ENSGALG00000002485 15214 0.819 - - - - - - 0.819 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
99. TRAP1 ENSGALG00000039951 11323 0.818 - - - - - - - 0.818 - - TNF receptor associated protein 1 [Source:NCBI gene;Acc:416666]
100. CDK5RAP2 ENSGALG00000041102 4042 0.818 - - - - - - 0.818 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]

There are 270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA