Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDC

Gene Name Gene ID Reads Annotation
PDC ENSGALG00000030417 4 phosducin [Source:HGNC Symbol;Acc:HGNC:8759]











Genes with expression patterns similar to PDC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDC ENSGALG00000030417 4 2 - - - - - 1.000 - 1.000 - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
2. HBS1L ENSGALG00000013962 181 1.536 - - - - - 0.799 - 0.737 - - HBS1 like translational GTPase [Source:HGNC Symbol;Acc:HGNC:4834]
3. LRCH3 ENSGALG00000007595 21 1 - - - - - 1.000 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
4. KREMEN1 ENSGALG00000005808 5 1 - - - - - 1.000 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
5. PEX5L ENSGALG00000043386 5 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
6. ZMAT3 ENSGALG00000040948 4 1 - - - - - 1.000 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
7. ATP1B4 ENSGALG00000008593 39 1 - - - - - 1.000 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
8. ENSGALG00000028527 ENSGALG00000028527 1 1 - - - - - 1.000 - - - -
9. KCNK10 ENSGALG00000010598 7 1 - - - - - 1.000 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
10. ENSGALG00000026169 ENSGALG00000026169 30 1 - - - - - - - 1.000 - -
11. CCR8 ENSGALG00000038069 6 1 - - - - - 1.000 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
12. ESYT3 ENSGALG00000012092 13 1 - - - - - 1.000 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
13. ICK ENSGALG00000016321 19 1 - - - - - 1.000 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
14. USH2A ENSGALG00000009652 2 1 - - - - - 1.000 - - - - usherin, transcript variant X3
15. GALNTL6 ENSGALG00000030588 3 1 - - - - - 1.000 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
16. MFNG ENSGALG00000012442 5 1 - - - - - 1.000 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
17. OGDHL ENSGALG00000002266 57 0.963 - - - - - 0.963 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
18. ABCA1 ENSGALG00000015433 11 0.958 - - - - - 0.958 - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
19. TOR1AIP2 ENSGALG00000004017 2 0.958 - - - - - 0.958 - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
20. gga-mir-30d ENSGALG00000018290 9 0.952 - - - - - 0.952 - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
21. THSD4 ENSGALG00000004087 12 0.951 - - - - - 0.951 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
22. LRRTM3 ENSGALG00000002864 29 0.951 - - - - - 0.951 - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
23. RS1 ENSGALG00000016523 11 0.951 - - - - - 0.951 - - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
24. DNAH1 ENSGALG00000004297 71 0.947 - - - - - - - 0.947 - - dynein axonemal heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2940]
25. FCHSD2 ENSGALG00000017329 3190 0.931 - - - - - 0.931 - - - - FCH and double SH3 domains 2 [Source:HGNC Symbol;Acc:HGNC:29114]
26. ENSGALG00000015888 ENSGALG00000015888 12 0.924 - - - - - 0.924 - - - -
27. SLC25A29 ENSGALG00000011220 17 0.914 - - - - - 0.914 - - - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
28. NDFIP2 ENSGALG00000016909 25 0.913 - - - - - 0.913 - - - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
29. LRRC49 ENSGALG00000004059 29 0.913 - - - - - 0.913 - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
30. C17H9ORF7 C17H9ORF7 71 0.911 - - - - - 0.911 - - - -
31. UBE4B ENSGALG00000002649 39 0.904 - - - - - 0.904 - - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
32. RORALPHA1 RORALPHA1 119 0.903 - - - - - 0.903 - - - -
33. MAPK14 ENSGALG00000042833 13 0.897 - - - - - 0.897 - - - - mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
34. WTIP ENSGALG00000025864 75 0.887 - - - - - 0.887 - - - - WT1 interacting protein [Source:HGNC Symbol;Acc:HGNC:20964]
35. ENSGALG00000028038 ENSGALG00000028038 9 0.878 - - - - - 0.878 - - - -
36. PRSS35 ENSGALG00000015847 52 0.878 - - - - - 0.878 - - - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
37. P2RX5 ENSGALG00000004613 31 0.869 - - - - - 0.869 - - - - purinergic receptor P2X 5 [Source:NCBI gene;Acc:395507]
38. ENSGALG00000001919 ENSGALG00000001919 531 0.861 - - - - - 0.861 - - - -
39. SLC32A1 ENSGALG00000038919 61 0.861 - - - - - 0.861 - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
40. DENND6B ENSGALG00000043771 22 0.86 - - - - - 0.860 - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
41. PWP2 60 0.859 - - - - - 0.859 - - - - PWP2, small subunit processome component
42. TNNT2 ENSGALG00000000302 568 0.858 - - - - - 0.858 - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
43. XYLB ENSGALG00000006173 23 0.856 - - - - - 0.856 - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
44. NDEL1 ENSGALG00000001163 16 0.855 - - - - - 0.855 - - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
45. LTK ENSGALG00000008615 33 0.852 - - - - - - - 0.852 - - leukocyte receptor tyrosine kinase
46. VWA5A ENSGALG00000028815 19 0.852 - - - - - - - 0.852 - - von Willebrand factor A domain containing 5A, transcript variant X5
47. ZNF654 ENSGALG00000022866 14 0.852 - - - - - - - 0.852 - - zinc finger protein 654 [Source:HGNC Symbol;Acc:HGNC:25612]
48. PGPEP1L ENSGALG00000007022 1 0.852 - - - - - - - 0.852 - - pyroglutamyl-peptidase I like [Source:HGNC Symbol;Acc:HGNC:27080]
49. P2RX3 ENSGALG00000040479 5 0.852 - - - - - - - 0.852 - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
50. XPNPEP2 ENSGALG00000025935 57 0.852 - - - - - - - 0.852 - - X-prolyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:12823]
51. WASF2 ENSGALG00000014012 30 0.852 - - - - - - - 0.852 - - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
52. PSTPIP1 ENSGALG00000002786 9 0.852 - - - - - - - 0.852 - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
53. CLIP4 ENSGALG00000009024 4 0.852 - - - - - - - 0.852 - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
54. C18orf42 C18orf42 3 0.852 - - - - - - - 0.852 - -
55. SNORD14 SNORD14 1032 0.852 - - - - - - - 0.852 - -
56. TMEM82 16 0.852 - - - - - - - 0.852 - - transmembrane protein 82, transcript variant X2
57. CCDC176 CCDC176 10 0.852 - - - - - - - 0.852 - -
58. ZFAT ENSGALG00000037698 34 0.852 - - - - - - - 0.852 - - zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
59. NIT2 ENSGALG00000015275 278 0.852 - - - - - - - 0.852 - - nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]
60. MEP1A ENSGALG00000033033 2 0.852 - - - - - - - 0.852 - - meprin A subunit alpha [Source:NCBI gene;Acc:422060]
61. HPRTL ENSGALG00000005361 31 0.852 - - - - - - - 0.852 - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
62. CLGN ENSGALG00000009826 54 0.852 - - - - - - - 0.852 - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
63. ATP6V0E1 10 0.852 - - - - - - - 0.852 - - ATPase H+ transporting V0 subunit e1
64. ENSGALG00000005650 ENSGALG00000005650 6 0.852 - - - - - - - 0.852 - -
65. ENSGALG00000028406 ENSGALG00000028406 1 0.852 - - - - - - - 0.852 - -
66. GZMA ENSGALG00000013548 22 0.852 - - - - - - - 0.852 - - granzyme A [Source:NCBI gene;Acc:395108]
67. MSH3 ENSGALG00000015589 83 0.852 - - - - - - - 0.852 - - mutS homolog 3 [Source:HGNC Symbol;Acc:HGNC:7326]
68. ENSGALG00000001404 ENSGALG00000001404 6 0.85 - - - - - - - 0.850 - -
69. LRTM2 ENSGALG00000026214 160 0.849 - - - - - 0.849 - - - - leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
70. TXNRD1 ENSGALG00000035345 4784 0.847 - - - - - 0.847 - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
71. SLC35F4 ENSGALG00000012094 30 0.845 - - - - - 0.845 - - - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
72. ABHD10 ENSGALG00000015378 12 0.844 - - - - - - - 0.844 - - abhydrolase domain containing 10 [Source:HGNC Symbol;Acc:HGNC:25656]
73. ZDHHC16 ENSGALG00000007592 19 0.844 - - - - - - - 0.844 - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
74. RLBP1 ENSGALG00000006676 52 0.844 - - - - - - - 0.844 - - retinaldehyde binding protein 1 [Source:NCBI gene;Acc:415492]
75. RAD51D ENSGALG00000031918 1312 0.829 - - - - - 0.829 - - - - RAD51 paralog D [Source:NCBI gene;Acc:417528]
76. MBP ENSGALG00000013640 62 0.817 - - - - - 0.817 - - - - myelin basic protein [Source:NCBI gene;Acc:396217]
77. SPINK5 SPINK5 195 0.814 - - - - - - - 0.814 - -
78. gga-mir-6561 ENSGALG00000026650 135 0.813 - - - - - 0.813 - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
79. INO80D ENSGALG00000029701 51 0.795 - - - - - - - 0.795 - - INO80 complex subunit D [Source:HGNC Symbol;Acc:HGNC:25997]
80. FAM160A1 ENSGALG00000010090 10 0.794 - - - - - 0.794 - - - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
81. TNNI2 ENSGALG00000006591 690 0.794 - - - - - 0.794 - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
82. AOX2P AOX2P 51 0.792 - - - - - 0.792 - - - -
83. GUCD1 ENSGALG00000006607 32 0.79 - - - - - 0.790 - - - - guanylyl cyclase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14237]
84. DHTKD1 ENSGALG00000003674 300 0.787 - - - - - 0.787 - - - - dehydrogenase E1 and transketolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23537]
85. XYLT2 ENSGALG00000007702 3 0.786 - - - - - 0.786 - - - - xylosyltransferase 2 [Source:NCBI gene;Acc:414780]
86. SLC46A1 ENSGALG00000003604 305 0.784 - - - - - 0.784 - - - - solute carrier family 46 member 1 [Source:NCBI gene;Acc:417569]
87. KAL1 KAL1 48 0.783 - - - - - 0.783 - - - -
88. SPSB1 ENSGALG00000002506 2205 0.783 - - - - - 0.783 - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
89. RXFP2 ENSGALG00000029764 1 0.78 - - - - - - - 0.780 - - relaxin/insulin-like family peptide receptor 2
90. HELB ENSGALG00000009885 8 0.78 - - - - - - - 0.780 - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
91. FAM20C ENSGALG00000038768 31 0.78 - - - - - 0.780 - - - - FAM20C, golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]
92. PTPRM ENSGALG00000031284 864 0.776 - - - - - 0.776 - - - - protein tyrosine phosphatase, receptor type M [Source:HGNC Symbol;Acc:HGNC:9675]
93. PLEKHG4 ENSGALG00000023898 65 0.775 - - - - - 0.775 - - - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
94. GFM2 ENSGALG00000014939 26 0.775 - - - - - 0.775 - - - - G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
95. C10orf67 15 0.774 - - - - - - - 0.774 - - chromosome 10 open reading frame 67, transcript variant X2
96. TSKU ENSGALG00000000761 10 0.768 - - - - - 0.768 - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
97. CTNNAL1 ENSGALG00000013207 44 0.765 - - - - - - - 0.765 - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
98. GGA.16412 GGA.16412 846 0.765 - - - - - 0.765 - - - -
99. PROX1 ENSGALG00000009791 1184 0.761 - - - - - 0.761 - - - - prospero homeobox 1 [Source:NCBI gene;Acc:395802]
100. LRRC9 2 0.761 - - - - - - - 0.761 - - leucine rich repeat containing 9

There are 22 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA