Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PCOLCE_1

Gene Name Gene ID Reads Annotation
PCOLCE_1 PCOLCE_1 2148










Genes with expression patterns similar to PCOLCE_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PCOLCE_1 PCOLCE_1 2148 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fdps ENSDARG00000040890 4000 3.57 - 0.959 - - - 0.857 0.906 0.848 - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
3. txn ENSDARG00000044125, ENSDARG00000116040 4758 3.294 - 0.835 - - - 0.707 0.871 0.881 - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
4. slc25a1b ENSDARG00000076381 6213 3.29 0.841 - - - - 0.757 0.779 0.913 - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
5. cst3 ENSDARG00000007795 13753 3.244 0.737 0.758 - - - 0.926 0.823 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
6. cdh6 ENSDARG00000014522 5492 3.226 0.734 - - - - 0.723 0.827 - 0.942 cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
7. pcbd1 ENSDARG00000031981 3373 3.1 0.753 0.731 - - - 0.811 0.805 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
8. gpd1b ENSDARG00000043180 6002 3.073 - 0.783 0.710 - - 0.837 0.743 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
9. TMEM254 ENSDARG00000109902 3377 2.657 - - - - - 0.851 0.853 0.953 - transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
10. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 2.592 - 0.838 - - - 0.923 0.831 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
11. TMEM120A ENSDARG00000030914 266 2.557 - 0.820 - - - 0.882 0.855 - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
12. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 2.542 - - - - - 0.737 0.812 0.993 - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
13. plcd1b ENSDARG00000034080 4074 2.531 - 0.799 - - - - 0.819 0.913 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
14. zgc:173961 zgc:173961 1540 2.528 0.739 0.903 - - - 0.886 - - -
15. dusp22a ENSDARG00000056396 605 2.527 - 0.835 - - - 0.927 0.765 - - dual specificity phosphatase 22a [Source:ZFIN;Acc:ZDB-GENE-040718-219]
16. ptplb ptplb 6135 2.508 - - - - - 0.779 0.792 - 0.937
17. APOB_1 APOB_1 2217 2.499 - 0.945 0.722 - - 0.832 - - -
18. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 2.492 - - - - - 0.833 0.840 0.819 - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
19. prickle1b ENSDARG00000045694 7536 2.479 0.763 - - - - 0.745 - 0.971 - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
20. arhgdig ENSDARG00000004034 10368 2.475 0.734 0.781 - - - - - 0.960 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
21. gata6 ENSDARG00000103589 746 2.465 0.754 0.849 - - - 0.862 - - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
22. btbd10b ENSDARG00000020252 7251 2.463 - - - - - 0.782 0.732 - 0.949 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
23. CHDH ENSDARG00000100304 2257 2.451 - - - 0.771 - 0.818 0.862 - - choline dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-120111-1]
24. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 2.435 0.765 - - - - - 0.727 - 0.943 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
25. CPN2 CPN2 682 2.433 - 0.741 - - - 0.805 0.887 - -
26. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 2.426 - 0.845 - - - 0.765 0.816 - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
27. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 2.411 0.743 0.886 - - - - 0.782 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
28. cry3_1 cry3_1 3347 2.411 - 0.736 - - - 0.974 0.701 - -
29. vtnb ENSDARG00000053831 2364 2.387 - 0.705 - - - 0.896 0.786 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
30. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 2.385 0.726 - - - - 0.802 0.857 - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
31. zgc:77651 zgc:77651 615 2.382 0.804 - - - - 0.737 0.841 - -
32. lamp2 ENSDARG00000014914 5035 2.374 0.890 - - - - 0.767 0.717 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
33. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 2.372 - 0.737 - - - 0.907 0.728 - - regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
34. bckdhbl ENSDARG00000093569 2166 2.372 - - - 0.728 - 0.886 0.758 - - branched chain keto acid dehydrogenase E1, beta polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-060830-1]
35. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 2.368 - - - - - 0.780 0.741 0.847 - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
36. zgc:154018 zgc:154018 362 2.366 - 0.845 0.709 - - - 0.812 - -
37. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 2.365 - 0.710 - - - 0.873 0.782 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
38. serpina1l ENSDARG00000090850 10625 2.365 - - 0.721 - - 0.909 0.735 - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
39. CABZ01057488.1 ENSDARG00000110427 598 2.364 - - 0.704 - - 0.793 0.867 - -
40. dsg2 dsg2 4039 2.356 0.740 0.872 - - - - 0.744 - -
41. zgc:136410 ENSDARG00000102241 8433 2.351 - 0.703 - - - 0.935 0.713 - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
42. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 2.344 - 0.755 0.771 - - 0.818 - - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
43. sb:cb37 ENSDARG00000041645 2018 2.337 0.724 - - - - 0.863 0.750 - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
44. cetp ENSDARG00000030872 611 2.334 0.777 - - - - 0.824 0.733 - - cholesteryl ester transfer protein, plasma [Source:ZFIN;Acc:ZDB-GENE-041114-54]
45. acsl4a ENSDARG00000004078 4241 2.333 - 0.753 - - - 0.796 0.784 - - acyl-CoA synthetase long chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]
46. myl9b ENSDARG00000008030 7830 2.326 - - 0.782 - - 0.736 - 0.808 - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
47. fn1b ENSDARG00000006526 9542 2.322 0.715 0.857 - - - 0.750 - - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
48. ctsh ENSDARG00000041108 2873 2.319 0.700 - - - - 0.895 0.724 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
49. slc26a5 ENSDARG00000022424 976 2.318 - 0.812 - - - 0.713 0.793 - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
50. sardh ENSDARG00000058102, ENSDARG00000112110 2150 2.306 0.753 - 0.744 - - 0.809 - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
51. nadkb ENSDARG00000060362 957 2.295 - 0.715 - - - 0.792 0.788 - - NAD kinase b [Source:ZFIN;Acc:ZDB-GENE-061103-433]
52. waslb ENSDARG00000006283 2160 2.294 - 0.709 - - - 0.741 0.844 - - Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
53. sepp1b 1004 2.292 - 0.739 - - - 0.768 0.785 - - selenoprotein P, plasma, 1b
54. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 2.292 0.700 - - - - 0.787 0.805 - - Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
55. sidt2 ENSDARG00000045976 1997 2.283 - 0.790 - - - 0.788 0.705 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
56. tfa ENSDARG00000016771 30517 2.282 - - 0.707 - - 0.861 0.714 - - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
57. aqp11 ENSDARG00000100555 983 2.275 - 0.813 - - - 0.739 0.723 - - aquaporin 11 [Source:ZFIN;Acc:ZDB-GENE-080418-1]
58. dmgdh ENSDARG00000025703 6088 2.266 0.752 0.788 0.726 - - - - - - dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
59. apoa2 ENSDARG00000015866 297380 2.264 - - 0.743 - - 0.819 0.702 - - apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
60. SZT2 252 2.258 - 0.813 - - - 0.708 0.737 - - seizure threshold 2 homolog (mouse)
61. hmox1 hmox1 1391 2.251 - - 0.724 - - 0.702 0.825 - -
62. wbp1lb ENSDARG00000029751 1072 2.239 0.709 0.741 - - - 0.789 - - - WW domain binding protein 1-like b [Source:ZFIN;Acc:ZDB-GENE-050522-112]
63. cnn2 ENSDARG00000035858 18201 2.238 0.769 - - - - - 0.744 0.725 - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
64. pepd ENSDARG00000102249 2644 2.23 0.718 0.725 - - - 0.787 - - - peptidase D [Source:ZFIN;Acc:ZDB-GENE-030131-9444]
65. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 2.211 0.703 - - - - 0.726 0.782 - - serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
66. apoa4 apoa4 84813 2.196 - 0.710 0.735 - - 0.751 - - -
67. mpc2 ENSDARG00000024478 16959 2.173 0.752 0.712 - - - - 0.709 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
68. pgpep1 ENSDARG00000054666 489 2.164 - 0.715 - - - 0.713 0.736 - - pyroglutamyl-peptidase I [Source:ZFIN;Acc:ZDB-GENE-050522-88]
69. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.951 - - - - - - - 0.986 0.965 BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
70. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.831 - - - - - - 0.861 0.970 - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
71. epdl2 ENSDARG00000055539 1895 1.801 - 0.899 - - - 0.902 - - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
72. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.793 - - - - - 0.810 - 0.983 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
73. cd9a ENSDARG00000005842 1708 1.788 - - - - - 0.918 0.870 - - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
74. BX004812.1 ENSDARG00000096968 5467 1.787 - - - - - 0.887 0.900 - -
75. mtp_1 3298 1.773 - 0.868 - - - 0.905 - - - microsomal triglyceride transfer protein
76. abca3b ENSDARG00000100524 2416 1.768 - - - - - - 0.784 0.984 - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
77. cpvl ENSDARG00000056480 2115 1.761 - - - - - 0.907 0.854 - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
78. f10 ENSDARG00000088581 4968 1.752 - - - - - 0.878 0.874 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
79. tmem110l ENSDARG00000045518 1783 1.751 - - - - - 0.958 0.793 - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
80. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.751 - - - - - 0.965 0.786 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
81. pck1 ENSDARG00000013522 1657 1.747 - - - - - 0.913 0.834 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
82. lipf ENSDARG00000018529 1849 1.741 0.808 - - - - 0.933 - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
83. ogn 5002 1.74 - 0.836 - - - - - 0.904 - osteoglycin
84. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.738 - - - - - - 0.783 - 0.955 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
85. atp6v1h ENSDARG00000006370 7028 1.736 - - - - - - 0.807 - 0.929 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
86. tcn2l tcn2l 2428 1.734 - - - - - 0.940 0.794 - -
87. nt5c3a ENSDARG00000058597 14299 1.732 - - - - - 0.894 0.838 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
88. zgc:194887 ENSDARG00000098586 437 1.731 - - - - - 0.869 0.862 - - zgc:194887 [Source:ZFIN;Acc:ZDB-GENE-081022-162]
89. f2 ENSDARG00000036041 3129 1.728 - 0.884 - - - 0.844 - - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
90. hp_1 ENSDARG00000051890, ENSDARG00000095807 1049 1.726 - - - - - 0.809 0.917 - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
91. mmp2 ENSDARG00000017676 2347 1.725 - 0.758 - - - - - 0.967 - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
92. azi2 ENSDARG00000102419 1380 1.721 - 0.756 - - - - - - 0.965 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
93. naga ENSDARG00000099313 2483 1.719 - - - - - 0.867 0.852 - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
94. g6pca.2 ENSDARG00000013721 2034 1.716 - 0.925 - - - 0.791 - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
95. VMO1_1 VMO1_1 828 1.714 - 0.804 - - - 0.910 - - -
96. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.713 - - - - - - 0.716 0.997 - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
97. atp6v0ca ENSDARG00000057853 23277 1.712 - - - - - 0.904 0.808 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
98. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 1.708 - 0.841 - - - 0.867 - - - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
99. zgc:152830 ENSDARG00000079932 12194 1.706 - - - - - 0.895 0.811 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
100. CD68 CD68 4599 1.704 - - - - - 0.912 0.792 - -

There are 1331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA