Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCNA

Gene Name Gene ID Reads Annotation
PCNA ENSGALG00000029292 19163 proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]











Genes with expression patterns similar to PCNA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCNA ENSGALG00000029292 19163 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
2. LARS ENSGALG00000007494 13966 1.744 - - - - - - 0.979 0.765 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
3. TMEM9B ENSGALG00000005908 14074 1.705 - - - - - - 0.997 - - 0.708 TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
4. BZW2 ENSGALG00000010809 29213 1.421 - - - - - - - 0.707 - 0.714 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
5. SAMM50 ENSGALG00000014194 20437 0.998 - - - - - - 0.998 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
6. FAM206A ENSGALG00000019524 7170 0.998 - - - - - - 0.998 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
7. GAS41 GAS41 9941 0.997 - - - - - - 0.997 - - -
8. SSR1 ENSGALG00000012798 62626 0.997 - - - - - - 0.997 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
9. CCDC47 ENSGALG00000000564 6584 0.997 - - - - - - 0.997 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
10. USP34 ENSGALG00000004455 6667 0.997 - - - - - - 0.997 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
11. STT3B ENSGALG00000011465 11939 0.997 - - - - - - 0.997 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
12. SF3A1 ENSGALG00000007937 11716 0.997 - - - - - - 0.997 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
13. EIF5B ENSGALG00000016764 30681 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
14. WDR33 ENSGALG00000002043 6340 0.996 - - - - - - 0.996 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
15. TLE4 TLE4 7278 0.996 - - - - - - 0.996 - - -
16. CASC4 ENSGALG00000008208 8338 0.996 - - - - - - 0.996 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
17. ZCCHC17 ENSGALG00000000618 5163 0.996 - - - - - - 0.996 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
18. SH2D3C ENSGALG00000005036 5101 0.996 - - - - - - 0.996 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
19. POGZ ENSGALG00000036365 4056 0.995 - - - - - - 0.995 - - - pogo transposable element with ZNF domain, transcript variant X2
20. BTG1 ENSGALG00000011276 17496 0.995 - - - - - - 0.995 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
21. HOXB3 ENSGALG00000043219 5198 0.995 - - - - - - 0.995 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
22. NAA15 ENSGALG00000009782 18563 0.995 - - - - - - 0.995 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
23. VPS41 ENSGALG00000031635 4391 0.995 - - - - - - 0.995 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
24. TRIM37 ENSGALG00000005084 4036 0.995 - - - - - - 0.995 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
25. RARRES2 ENSGALG00000042642 3043 0.995 - - - - - - 0.995 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
26. MTF2 ENSGALG00000043087 15225 0.995 - - - - - - 0.995 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
27. PPP1CB ENSGALG00000010026 6909 0.994 - - - - - - 0.994 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
28. SLC9A3R2 ENSGALG00000005608 4220 0.994 - - - - - - 0.994 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
29. C-MET C-MET 1650 0.994 - - - - - - 0.994 - - -
30. GTF2I ENSGALG00000021665 6812 0.994 - - - - - - 0.994 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
31. FAAH ENSGALG00000010433 3309 0.994 - - - - - - 0.994 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
32. FKBP9 ENSGALG00000037669 12079 0.993 - - - - - - 0.993 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
33. PPP1R8 ENSGALG00000000729 11797 0.992 - - - - - - 0.992 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
34. NSF ENSGALG00000001055 7399 0.992 - - - - - - 0.992 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
35. GFPT1 ENSGALG00000036391 14025 0.991 - - - - - - 0.991 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
36. BID ENSGALG00000013039 12427 0.99 - - - - - - 0.990 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
37. OLFML3 ENSGALG00000001956 28633 0.985 - - - - - - 0.985 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
38. LPHN2 LPHN2 16507 0.983 - - - - - - 0.983 - - -
39. FANCC ENSGALG00000012618 7002 0.983 - - - - - - 0.983 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
40. NOL9 ENSGALG00000028958 23978 0.98 - - - - - - 0.980 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
41. STK3 ENSGALG00000032850 6339 0.978 - - - - - - 0.978 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
42. SRSF7 ENSGALG00000033120 43444 0.969 - - - - - - 0.969 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
43. PKM ENSGALG00000001992 93960 0.945 - - - - - - 0.945 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
44. ACTG1 ENSGALG00000001381 63905 0.936 - - - - - - 0.936 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
45. SYNCRIP ENSGALG00000015830 30555 0.931 - - - - - - 0.931 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
46. GNB2L1 ENSGALG00000000122 194871 0.91 - - - - - - 0.910 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
47. IREB2 ENSGALG00000035462 10659 0.899 - - - - - - - 0.899 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
48. NUP50 ENSGALG00000014222 11743 0.882 - - - - - - - 0.882 - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
49. GTPBP4 ENSGALG00000006703 16183 0.881 - - - - - - - 0.881 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
50. SFSWAP ENSGALG00000002487 9977 0.875 - - - - - - 0.875 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
51. NDUFS4 ENSGALG00000028026 25876 0.875 - - - - - - 0.875 - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
52. SEC63 ENSGALG00000015308 11596 0.873 - - - - - - - 0.873 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
53. PPID ENSGALG00000009451 7529 0.86 - - - - - - - 0.860 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
54. EEF1D 153795 0.855 - - - - - - 0.855 - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
55. MCM4 ENSGALG00000012915 13151 0.846 - - - - - - - 0.846 - - minichromosome maintenance complex component 4
56. XRN1 ENSGALG00000002706 4014 0.844 - - - - - - - 0.844 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
57. UTP3 ENSGALG00000011553 8814 0.841 - - - - - - - 0.841 - - UTP3, small subunit processome component homolog (S. cerevisiae)
58. OGFOD1 6926 0.835 - - - - - - - 0.835 - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
59. RBM12B ENSGALG00000035129 4314 0.829 - - - - - - - 0.829 - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
60. PTTG1 17936 0.828 - - - - - - - 0.828 - - pituitary tumor-transforming 1, transcript variant X1
61. PDE3B ENSGALG00000006035 3732 0.825 - - - - - - - 0.825 - - phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
62. CREPT CREPT 17142 0.824 - - - - - - - 0.824 - -
63. WRB ENSGALG00000016070 5199 0.822 - - - - - - - 0.822 - - tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
64. Sep-06 Sep-06 5961 0.82 - - - - - - - 0.820 - -
65. CCDC53 CCDC53 3732 0.819 - - - - - - - 0.819 - -
66. MYEF2 ENSGALG00000032546 7436 0.819 - - - - - - - 0.819 - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
67. CYB5R2 ENSGALG00000032372 7967 0.817 - - - - - - - 0.817 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
68. TRAPPC3 ENSGALG00000002284 23302 0.813 - - - - - - - 0.813 - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
69. RPS8 ENSGALG00000010124 363516 0.812 - - - - - - 0.812 - - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
70. SPC25 ENSGALG00000010900 14238 0.808 - - - - - - - - - 0.808 SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
71. NSMCE2 ENSGALG00000043439 5658 0.808 - - - - - - - 0.808 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
72. ZSWIM7 ENSGALG00000023686 6459 0.801 - - - - - - - 0.801 - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
73. TERF1 ENSGALG00000037453 4497 0.799 - - - - - - - 0.799 - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
74. ANAPC16 ENSGALG00000004410 18001 0.799 - - - - - - - 0.799 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
75. PARN ENSGALG00000003091 6363 0.797 - - - - - - - 0.797 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
76. RER1 ENSGALG00000021683 9074 0.792 - - - - - - - 0.792 - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
77. PPP3CA ENSGALG00000039498 9568 0.785 - - - - - - - 0.785 - - protein phosphatase 3 catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9314]
78. LOC112529965 ENSGALG00000010758 5395 0.783 - - - - - - - 0.783 - - NADH-cytochrome b5 reductase-like
79. STOML2 STOML2 15566 0.783 - - - - - - - 0.783 - -
80. LIMS1 ENSGALG00000029970 7244 0.783 - - - - - - - 0.783 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
81. CAP1 ENSGALG00000036294 18598 0.782 - - - - - - - 0.782 - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
82. BET1L ENSGALG00000004172 5305 0.782 - - - - - - - 0.782 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
83. PCNP ENSGALG00000015330 15750 0.781 - - - - - - - - - 0.781 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
84. CCNK ENSGALG00000011138 6416 0.781 - - - - - - - 0.781 - - cyclin K [Source:NCBI gene;Acc:423446]
85. PRDX1 ENSGALG00000010243 151918 0.781 - - - - - - - - - 0.781 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
86. MTMR8 ENSGALG00000007590 6022 0.779 - - - - - - - 0.779 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
87. RELL1 ENSGALG00000014336 2950 0.778 - - - - - - - 0.778 - - RELT like 1 [Source:NCBI gene;Acc:422795]
88. MED27 ENSGALG00000003683 6808 0.777 - - - - - - - 0.777 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
89. PDDC1 5179 0.776 - - - - - - - 0.776 - - Parkinson disease 7 domain containing 1, transcript variant X6
90. RNH1 ENSGALG00000006904 14542 0.775 - - - - - - - 0.775 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
91. GPALPP1 ENSGALG00000031567 4221 0.77 - - - - - - - 0.770 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
92. TBC1D7 ENSGALG00000012731 4891 0.77 - - - - - - - 0.770 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
93. ARID2 ENSGALG00000033074 3461 0.77 - - - - - - - 0.770 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
94. QDPR ENSGALG00000030070 6953 0.77 - - - - - - - - - 0.770 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
95. EIF5A2 ENSGALG00000009309 143671 0.769 - - - - - - 0.769 - - - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
96. PRPF40A ENSGALG00000012526 7724 0.768 - - - - - - - 0.768 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
97. ATP6V0A2 ENSGALG00000003194 4824 0.766 - - - - - - - 0.766 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
98. DTWD2 ENSGALG00000002250 1604 0.766 - - - - - - - - - 0.766 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
99. CUX1_1 ENSGALG00000021636 3705 0.765 - - - - - - - 0.765 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
100. RPN1 ENSGALG00000005907 25315 0.765 - - - - - - - 0.765 - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]

There are 193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA