Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDHA11

Gene Name Gene ID Reads Annotation
PCDHA11 58 protocadherin alpha 11











Genes with expression patterns similar to PCDHA11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCDHA11 58 7 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 protocadherin alpha 11
2. CLCNKB ENSGALG00000003713 27 1.825 - - - - - 0.825 1.000 - - - chloride voltage-gated channel Kb, transcript variant X3
3. DMB1 ENSGALG00000000162 7 1.72 - - 0.720 - - - 1.000 - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
4. GRM3 ENSGALG00000006576 474 1.68 - - - - - - - - 0.730 0.950 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
5. ECEL1 ENSGALG00000030420 670 1.624 - - - - - - - - 0.716 0.908 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
6. SLC10A4 ENSGALG00000033908 300 1.612 - - - - - - - - 0.746 0.866 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
7. ST6GALNAC2L ENSGALG00000006900 85 1.605 - - 0.717 - - 0.888 - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like, transcript variant X3
8. ELAVL4 ENSGALG00000010533 4978 1.562 - - - - - - - - 0.748 0.814 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
9. STMN2 ENSGALG00000039690 989 1.555 - - - - - - - - 0.709 0.846 stathmin 2 [Source:NCBI gene;Acc:396095]
10. MNX1 ENSGALG00000041154 244 1.536 - - - - - - - - 0.709 0.827 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
11. INA ENSGALG00000028238 208 1.516 - - - - - - - - 0.727 0.789 internexin neuronal intermediate filament protein alpha
12. ENSGALG00000012195 ENSGALG00000012195 1 1 - - - 1.000 - - - - - -
13. CDH20 ENSGALG00000012906 2 1 - - - - - - 1.000 - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
14. FAM83H ENSGALG00000033118 50 1 - - - - - - 1.000 - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
15. CNKSR3 ENSGALG00000027159 41 1 - - - - - - 1.000 - - - CNKSR family member 3, transcript variant X2
16. HOXB13 ENSGALG00000033154 71 1 - - - - - - 1.000 - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
17. MAP2K1 ENSGALG00000007687 250 1 - - - - - - 1.000 - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
18. BROX ENSGALG00000009413 15 1 - - - - - - 1.000 - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
19. SNCB ENSGALG00000021542 19 1 - - - - - - 1.000 - - - synuclein beta [Source:NCBI gene;Acc:395391]
20. TUSC5 15 1 - - - - - - 1.000 - - - tumor suppressor candidate 5
21. DSG2 ENSGALG00000015142 67 1 - - - - - - 1.000 - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
22. RGS13 ENSGALG00000026810 8 1 - - - - - - 1.000 - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
23. PTPRD ENSGALG00000015058 37 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
24. C2CD3 ENSGALG00000017314 13 1 - - - - - - 1.000 - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
25. GRHL3 ENSGALG00000004249 1 1 - - - - - - 1.000 - - - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
26. GABARAPL3 GABARAPL3 32 1 - - - - - - 1.000 - - -
27. SULT1B ENSGALG00000023122 7 1 - - - - - - 1.000 - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
28. STEAP4 ENSGALG00000008997 8 1 - - - - - - 1.000 - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
29. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - 1.000 - - -
30. MIER3 ENSGALG00000014721 57 1 - - - - - - 1.000 - - - MIER family member 3, transcript variant X6
31. PI15 ENSGALG00000029264 21 1 - - - - - - 1.000 - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
32. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - 1.000 - - -
33. SEMA4D ENSGALG00000010697 10 1 - - - - - - 1.000 - - - semaphorin 4D [Source:NCBI gene;Acc:396331]
34. MYNN ENSGALG00000009409 11 1 - - - - - - 1.000 - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
35. SLC44A1 ENSGALG00000015439 32 1 - - - - - - 1.000 - - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
36. KIAA1377 KIAA1377 48 1 - - - - - - 1.000 - - -
37. uc_6 uc_6 14 1 - - - - - - 1.000 - - -
38. DRG11 DRG11 32 1 - - - - - - 1.000 - - -
39. SYNE3 ENSGALG00000011076 22 1 - - - - - 1.000 - - - - spectrin repeat containing nuclear envelope family member 3 [Source:HGNC Symbol;Acc:HGNC:19861]
40. LOC422320 ENSGALG00000007703 6 1 - - - - - - 1.000 - - - ligand of Numb protein X 2-like, transcript variant X1
41. PIK3R4 ENSGALG00000040917 10 1 - - - - - - 1.000 - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
42. PAPPA ENSGALG00000007079 6 1 - - - - - - 1.000 - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
43. PLCZ1 ENSGALG00000013123 3 1 - - - - - - 1.000 - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
44. STRADB ENSGALG00000008373 10 1 - - - - - - 1.000 - - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
45. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 1 - - - - - - 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
46. PDE8A ENSGALG00000005992 10 0.963 - - - - - 0.963 - - - - phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
47. ENSGALG00000009794 ENSGALG00000009794 5 0.963 - - - 0.963 - - - - - -
48. PTPN13 ENSGALG00000011078 62 0.962 - - - - - 0.962 - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
49. MTMR9LP ENSGALG00000003313 64 0.946 - - - - - 0.946 - - - - myotubularin related protein 9-like, pseudogene, transcript variant X3
50. UTS2D UTS2D 2246 0.932 - - - - - - - - - 0.932
51. SCML4 ENSGALG00000015309 499 0.929 - - - - - - - - - 0.929 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
52. CLVS2 ENSGALG00000014853 22 0.928 - - - - - - - - - 0.928 clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
53. SEPN1 SEPN1 58 0.92 - - - - - 0.920 - - - -
54. EMID1 4 0.918 - - - 0.918 - - - - - - EMI domain containing 1, transcript variant X5
55. SIX2 ENSGALG00000023303 2 0.918 - - - 0.918 - - - - - - SIX homeobox 2 [Source:NCBI gene;Acc:724086]
56. C2orf62 C2orf62 9 0.918 - - - 0.918 - - - - - -
57. LRP3 ENSGALG00000004853 13 0.918 - - - 0.918 - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
58. CYR61 ENSGALG00000008661 43 0.918 - - - 0.918 - - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
59. MEIG1 ENSGALG00000000451 12 0.918 - - - 0.918 - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
60. AIRE AIRE 3 0.918 - - - 0.918 - - - - - -
61. ENSGALG00000023695 ENSGALG00000023695 2 0.918 - - - 0.918 - - - - - -
62. PLA2G1BL ENSGALG00000007236 4 0.918 - - - 0.918 - - - - - - phospholipase A2, major isoenzyme-like
63. MREG ENSGALG00000003758 3 0.918 - - - 0.918 - - - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
64. ANPEP ENSGALG00000027501 234 0.918 - - - 0.918 - - - - - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
65. SEC31B ENSGALG00000005722 13 0.918 - - - 0.918 - - - - - - SEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]
66. RHOF ENSGALG00000039724 8 0.918 - - - 0.918 - - - - - - ras homolog family member F, filopodia associated [Source:NCBI gene;Acc:416848]
67. ASPR ASPR 1 0.918 - - - 0.918 - - - - - -
68. CYP7B1 ENSGALG00000029435 3 0.918 - - - 0.918 - - - - - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
69. DOCK2 ENSGALG00000002080 13 0.918 - - - 0.918 - - - - - - dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]
70. PGAP3 ENSGALG00000022030 87 0.918 - - - 0.918 - - - - - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
71. ENSGALG00000001478 ENSGALG00000001478 23 0.918 - - - 0.918 - - - - - -
72. TRPM1 ENSGALG00000003849 5 0.918 - - - 0.918 - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
73. PGAP1 ENSGALG00000030789 3 0.918 - - - 0.918 - - - - - - post-GPI attachment to proteins 1, transcript variant X3
74. FAM194A 1 0.918 - - - 0.918 - - - - - - family with sequence similarity 194, member A, transcript variant X2
75. ENSGALG00000019430 ENSGALG00000019430 32 0.918 - - - 0.918 - - - - - -
76. GAP43 ENSGALG00000015089 505 0.905 - - - - - - - - - 0.905 growth associated protein 43 [Source:NCBI gene;Acc:427955]
77. MIS18A ENSGALG00000015884 25 0.897 - - - - 0.897 - - - - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
78. NEFL ENSGALG00000000314 4883 0.884 - - - - - - - - - 0.884 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
79. SNAP25 ENSGALG00000009003 222 0.882 - - - - - - - - - 0.882 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
80. MYT1L ENSGALG00000016384 147 0.878 - - - - - - - - - 0.878 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
81. SLC5A7 ENSGALG00000016804 93 0.875 - - - - - - - - - 0.875 solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
82. GRB2 ENSGALG00000008016 216 0.872 - - - - - - 0.872 - - - growth factor receptor bound protein 2 [Source:NCBI gene;Acc:386572]
83. MAP1B ENSGALG00000014999 6288 0.872 - - - - - - - - - 0.872 microtubule associated protein 1B
84. SIAT8C SIAT8C 178 0.868 - - - - - - - - - 0.868
85. ENSGALG00000014620 ENSGALG00000014620 7 0.864 - - - 0.864 - - - - - -
86. BRINP2 ENSGALG00000004448 26 0.86 - - - - - - - - - 0.860 BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
87. MYT1 ENSGALG00000005932 2017 0.859 - - - - - - - - - 0.859 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
88. IL-12B IL-12B 14 0.858 - - - - - - 0.858 - - -
89. ENSGALG00000003440 ENSGALG00000003440 42 0.858 - - - - - - 0.858 - - -
90. ALCAM ENSGALG00000015348 14283 0.856 - - - - - - - - - 0.856 activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
91. EF1A EF1A 2378 0.853 - - - - - - - - - 0.853
92. TINAG ENSGALG00000016300 5 0.853 - - - 0.853 - - - - - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
93. SETD6 ENSGALG00000002247 6 0.85 - - - 0.850 - - - - - - SET domain containing 6 [Source:NCBI gene;Acc:101750922]
94. ANTXRL ENSGALG00000005969 230 0.848 - - - - - - 0.848 - - - anthrax toxin receptor-like
95. VPS29L ENSGALG00000005951 31 0.848 - - - - - - 0.848 - - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
96. RTN1 ENSGALG00000012006 2438 0.847 - - - - - - - - - 0.847 reticulon 1 [Source:NCBI gene;Acc:378791]
97. EFCAB6 ENSGALG00000014188 139 0.846 - - - - - - - - - 0.846 EF-hand calcium binding domain 6, transcript variant X3
98. BLK ENSGALG00000016661 68 0.844 - - - - - - 0.844 - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
99. EML1 1941 0.839 - - - - - - - - - 0.839 echinoderm microtubule associated protein like 1, transcript variant X11
100. NEFM ENSGALG00000000317 6992 0.826 - - - - - - - - - 0.826 neurofilament medium [Source:NCBI gene;Acc:396206]

There are 150 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA