Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDH9

Gene Name Gene ID Reads Annotation
PCDH9 ENSGALG00000016908 788 protocadherin 9, transcript variant X1











Genes with expression patterns similar to PCDH9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCDH9 ENSGALG00000016908 788 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 9, transcript variant X1
2. EDN1 ENSGALG00000012735 654 0.932 - - - - - 0.932 - - - - endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]
3. SLITRK4 ENSGALG00000007242 165 0.886 - - - 0.886 - - - - - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
4. GCC1 ENSGALG00000033149 1915 0.854 - - - 0.854 - - - - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
5. SEMA3G ENSGALG00000004476 355 0.834 - - - - - 0.834 - - - - semaphorin 3G [Source:HGNC Symbol;Acc:HGNC:30400]
6. TPD52L1 ENSGALG00000014843 219 0.834 - - - - - 0.834 - - - - tumor protein D52 like 1 [Source:NCBI gene;Acc:374049]
7. PPFIBP2 ENSGALG00000005294 133 0.829 - - - - - - - - - 0.829 PPFIA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9250]
8. GRK4 ENSGALG00000015645 1065 0.828 - - - 0.828 - - - - - - G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
9. WNT5A ENSGALG00000034168 10160 0.825 - - - - - - - - - 0.825 Wnt family member 5A [Source:NCBI gene;Acc:395703]
10. BLIMP-1 BLIMP-1 214 0.824 - - - 0.824 - - - - - -
11. PIEZO2 ENSGALG00000042134 323 0.822 - - - - - - - - - 0.822 piezo type mechanosensitive ion channel component 2, transcript variant X7
12. GJA5 ENSGALG00000039452 1194 0.82 - - - - - 0.820 - - - - gap junction protein alpha 5 [Source:NCBI gene;Acc:396502]
13. MMRN1 ENSGALG00000010391 997 0.818 - - - - - - - - - 0.818 multimerin 1 [Source:HGNC Symbol;Acc:HGNC:7178]
14. ZDHHC7 ENSGALG00000042522 1774 0.812 - - - 0.812 - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
15. LDHD ENSGALG00000023828 60 0.805 - - - - - - - - - 0.805 lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
16. FAM185A ENSGALG00000008301 754 0.804 - - - 0.804 - - - - - - family with sequence similarity 185 member A [Source:HGNC Symbol;Acc:HGNC:22412]
17. PTH ENSGALG00000042878 40 0.802 - - - - - - 0.802 - - - parathyroid hormone [Source:NCBI gene;Acc:396436]
18. MYO10L ENSGALG00000011172 80 0.802 - - - - - - 0.802 - - - myosin-X-like, transcript variant X2
19. SERINC3 ENSGALG00000004220 33 0.802 - - - - - - 0.802 - - - serine incorporator 3 [Source:NCBI gene;Acc:419196]
20. NCDN ENSGALG00000002408 6180 0.8 - - - 0.800 - - - - - - neurochondrin [Source:NCBI gene;Acc:419633]
21. PARP3 ENSGALG00000004517 331 0.793 - - - - - - - - - 0.793 poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
22. SCNN1B ENSGALG00000006202 87 0.791 - - - - - - 0.791 - - - sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
23. ENPP1 ENSGALG00000034397 278 0.79 - - - - - - - - - 0.790 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:3356]
24. NDNF ENSGALG00000011962 2261 0.783 - - - - - 0.783 - - - - neuron-derived neurotrophic factor, transcript variant X4
25. NAA50 ENSGALG00000033889 3551 0.782 - - - 0.782 - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
26. FBXO32 ENSGALG00000041202 1066 0.777 - - - - - - - - - 0.777 F-box protein 32 [Source:NCBI gene;Acc:420343]
27. DIAPH1 DIAPH1 357 0.773 - - - - - - - - - 0.773
28. SNED1 ENSGALG00000043596 693 0.772 - - - - - - - - - 0.772 sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
29. TNRC6A ENSGALG00000006068 9166 0.771 - - - 0.771 - - - - - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
30. KIAA1524 ENSGALG00000015360 3527 0.77 - - - - - - - - - 0.770 KIAA1524 [Source:NCBI gene;Acc:418410]
31. UHRF2 ENSGALG00000015052 1268 0.768 - - - - - - - - - 0.768 ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
32. ARHGEF3 ENSGALG00000005481 683 0.767 - - - - - - - - - 0.767 Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
33. CPGC CPGC 33 0.764 - - - - - 0.764 - - - -
34. ST3GAL1 ENSGALG00000037773 2014 0.764 - - - 0.764 - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:NCBI gene;Acc:396140]
35. POLR3E ENSGALG00000007008 4010 0.755 - - - 0.755 - - - - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
36. FAT4 ENSGALG00000011823 774 0.753 - - - - - - - - - 0.753 FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
37. ARHGEF6 ENSGALG00000006439 5275 0.753 - - - 0.753 - - - - - - Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:NCBI gene;Acc:422247]
38. SLC7A6 ENSGALG00000029324 427 0.753 - - - - - - - - - 0.753 solute carrier family 7 member 6 [Source:HGNC Symbol;Acc:HGNC:11064]
39. FUT8 ENSGALG00000036443 5589 0.751 - - - 0.751 - - - - - - fucosyltransferase 8 [Source:NCBI gene;Acc:423178]
40. CDCA9 ENSGALG00000021225 2244 0.75 - - - - - - - - - 0.750 cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
41. DENND2A ENSGALG00000012857 350 0.75 - - - - - - - - - 0.750 DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
42. SWIP-1 SWIP-1 6024 0.749 - - - - - - - - - 0.749
43. ME1 ENSGALG00000015849 1169 0.746 - - - 0.746 - - - - - - malic enzyme 1 [Source:NCBI gene;Acc:374189]
44. GPR20 ENSGALG00000041730 1926 0.746 - - - - - - - - - 0.746 G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
45. ARFIP1 ENSGALG00000041361 7351 0.741 - - - - - - - - 0.741 - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
46. P4HA2 ENSGALG00000006677 5510 0.739 - - - - - - - - - 0.739 prolyl 4-hydroxylase subunit alpha 2 [Source:NCBI gene;Acc:416326]
47. NUF2 ENSGALG00000003438 779 0.739 - - - - - - - - - 0.739 NUF2, NDC80 kinetochore complex component [Source:NCBI gene;Acc:395135]
48. SIL1 ENSGALG00000002457 147 0.739 - - - - - - - - - 0.739 SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
49. RABEPK ENSGALG00000042210 4492 0.738 - - - 0.738 - - - - - - Rab9 effector protein with kelch motifs [Source:NCBI gene;Acc:772357]
50. XYLT1 ENSGALG00000006757 169 0.737 - - - - - 0.737 - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
51. MPDZ ENSGALG00000005846 3179 0.736 - - - - - - - - - 0.736 multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
52. AVL9 ENSGALG00000041568 1558 0.735 - - - 0.735 - - - - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
53. ZNF618 ENSGALG00000008886 1326 0.734 - - - 0.734 - - - - - - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
54. CAND1 4541 0.733 - - - 0.733 - - - - - - cullin associated and neddylation dissociated 1
55. ZBTB7C ENSGALG00000033408 711 0.732 - - - - - - 0.732 - - - zinc finger and BTB domain containing 7C [Source:HGNC Symbol;Acc:HGNC:31700]
56. ROCK2 ENSGALG00000016451 780 0.729 - - - - - - - - - 0.729 Rho associated coiled-coil containing protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:10252]
57. DOCK4 ENSGALG00000009480 61 0.729 - - - - - - 0.729 - - - dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]
58. COL3A1 ENSGALG00000035584 39 0.729 - - - - - - 0.729 - - - collagen type III alpha 1 chain [Source:NCBI gene;Acc:396340]
59. KIAA0196 KIAA0196 4011 0.729 - - - 0.729 - - - - - -
60. UPRT ENSGALG00000007793 321 0.724 - - - - - - - - - 0.724 uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
61. SLC16A7 ENSGALG00000009759 1108 0.724 - - - - - - - - 0.724 - solute carrier family 16 member 7 [Source:NCBI gene;Acc:417815]
62. CCNY ENSGALG00000007076 3921 0.723 - - - - - - - - - 0.723 cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
63. CIDEC ENSGALG00000026945 718 0.722 - - - - - - 0.722 - - - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
64. HBE 329974 0.722 - - - - - - - - - 0.722 hemoglobin subunit epsilon
65. GDA ENSGALG00000015141 21 0.721 - - - - - 0.721 - - - - guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
66. CCDC80 ENSGALG00000015193 1387 0.721 - - - - - - - - - 0.721 coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
67. GALNT5 1027 0.721 - - - 0.721 - - - - - - polypeptide N-acetylgalactosaminyltransferase 5, transcript variant X1
68. CTTNBP2NL ENSGALG00000026182 2231 0.72 - - - 0.720 - - - - - - CTTNBP2 N-terminal like [Source:HGNC Symbol;Acc:HGNC:25330]
69. KPNA4 ENSGALG00000009549 3674 0.719 - - - - - - - - - 0.719 karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
70. TANC1 ENSGALG00000012570 4196 0.719 - - - - - - - - - 0.719 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
71. ENSGALG00000010336 ENSGALG00000010336 16 0.719 - - - 0.719 - - - - - -
72. C8B ENSGALG00000010853 21 0.717 - - - 0.717 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
73. IL34 ENSGALG00000028466 270 0.717 - - - - - 0.717 - - - - interleukin 34
74. TRIQK 1395 0.717 - - - - - - - - - 0.717 triple QxxK/R motif containing
75. MMR1L3 ENSGALG00000008638 26 0.717 - - - 0.717 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
76. AIM1 51 0.715 - - - 0.715 - - - - - - absent in melanoma 1, transcript variant X2
77. TAF2 ENSGALG00000043193 6311 0.715 - - - - - - - - - 0.715 TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
78. BFIV21 BFIV21 30 0.715 - - - 0.715 - - - - - -
79. GRIN2A ENSGALG00000007278 17 0.714 - - - 0.714 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
80. PROC ENSGALG00000001780 26 0.714 - - - 0.714 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
81. RYR2 ENSGALG00000010812 95 0.713 - - - 0.713 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
82. PTGR2 ENSGALG00000009269 4991 0.711 - - - - - - - - - 0.711 prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
83. TNFRSF11B ENSGALG00000043167 911 0.711 - - - - - - - - - 0.711 TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
84. HBZ ENSGALG00000023740 507289 0.71 - - - - - - - - - 0.710 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
85. TRMT2A ENSGALG00000002094 2505 0.71 - - - 0.710 - - - - - - tRNA methyltransferase 2 homolog A [Source:HGNC Symbol;Acc:HGNC:24974]
86. CFAP74 ENSGALG00000001288 54 0.709 - - - 0.709 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
87. CYP7B1 ENSGALG00000029435 3 0.709 - - - - - 0.709 - - - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
88. FYN ENSGALG00000015022 1208 0.707 - - - - - 0.707 - - - - FYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:396294]
89. CUBN ENSGALG00000008704 21 0.707 - - - 0.707 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
90. IL16 ENSGALG00000006388 3 0.705 - - - - - 0.705 - - - - interleukin 16 [Source:NCBI gene;Acc:374270]
91. C3H20ORF94 C3H20ORF94 414 0.705 - - - - - - - - 0.705 -
92. ZDHHC21 ENSGALG00000027428 497 0.705 - - - - - - - 0.705 - - zinc finger DHHC-type containing 21 [Source:NCBI gene;Acc:427356]
93. ZNF384 ENSGALG00000032599 2369 0.704 - - - 0.704 - - - - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
94. NCAPG ENSGALG00000014425 929 0.704 - - - - - - - - - 0.704 non-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]
95. EPB41L4A ENSGALG00000000234 113 0.704 - - - 0.704 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
96. NANOS1 ENSGALG00000027980 801 0.703 - - - - - - 0.703 - - - nanos C2HC-type zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:23044]
97. LMCD1 ENSGALG00000008349 928 0.702 - - - - - - - - 0.702 - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
98. KLHDC1 ENSGALG00000012241 349 0.702 - - - - - - - - 0.702 - kelch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19836]
99. NKX1-1 ENSGALG00000035650 187 0.701 - - - - - - 0.701 - - - NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA