Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDH9

Gene Name Gene ID Reads Annotation
PCDH9 ENSDARG00000063264 1309 protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]










Genes with expression patterns similar to PCDH9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PCDH9 ENSDARG00000063264 1309 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
2. syt11a ENSDARG00000057913 1145 2.508 0.707 0.957 - - - - - 0.844 - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
3. NPAS3 ENSDARG00000109820 362 2.38 0.782 0.786 - - - - - 0.812 - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
4. nebl ENSDARG00000021200 40 2.366 0.797 0.786 - - - - - 0.783 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
5. dpysl5a ENSDARG00000011141 1827 2.358 0.808 0.844 - - - - - - 0.706 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
6. cacna2d3 ENSDARG00000078760 211 2.348 0.754 0.811 - - - - - 0.783 - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
7. htr3a ENSDARG00000089212 51 2.314 0.749 0.786 - - - - - 0.779 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
8. adam23a ENSDARG00000062323 580 1.793 0.889 0.904 - - - - - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
9. TUSC5 TUSC5 1436 1.789 0.903 0.886 - - - - - - -
10. sprb ENSDARG00000058553 1694 1.781 0.897 0.884 - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
11. stx1b ENSDARG00000000503 2724 1.77 0.819 0.951 - - - - - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
12. hoxb8a ENSDARG00000056027 6340 1.76 0.761 - - - - - 0.999 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
13. sv2bb ENSDARG00000060711 196 1.758 0.911 0.847 - - - - - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
14. slc32a1 ENSDARG00000059775 1092 1.755 0.814 0.941 - - - - - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
15. zic4 ENSDARG00000031307 1228 1.749 0.895 0.854 - - - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
16. scn8aa ENSDARG00000005775 792 1.746 0.768 0.978 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
17. CU179656.1 ENSDARG00000107086 270 1.746 0.861 0.885 - - - - - - -
18. khdrbs1a ENSDARG00000052856 53666 1.741 0.778 - - - - - 0.963 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
19. gng3 ENSDARG00000009553 2530 1.733 0.848 0.885 - - - - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
20. amph ENSDARG00000007663 599 1.729 0.868 0.861 - - - - - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
21. cers6 ENSDARG00000053583 247 1.729 0.887 0.842 - - - - - - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
22. CHL1 CHL1 1553 1.728 0.769 0.959 - - - - - - -
23. si:dkey-121a11.3 ENSDARG00000071458 118 1.726 0.849 0.877 - - - - - - - si:dkey-121a11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-417]
24. mapk12b ENSDARG00000006409 2246 1.724 0.870 0.854 - - - - - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
25. vsnl1a ENSDARG00000023228 1584 1.71 0.759 0.951 - - - - - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
26. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.705 0.844 0.861 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
27. rbfox3 rbfox3 1443 1.702 0.800 0.902 - - - - - - -
28. scrt2 ENSDARG00000056175 4331 1.701 0.894 0.807 - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
29. si:dkeyp-77h1.4 ENSDARG00000058248 54 1.699 0.796 0.903 - - - - - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
30. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.698 0.885 0.813 - - - - - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
31. tnika ENSDARG00000056218 728 1.696 0.907 0.789 - - - - - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
32. snap25a ENSDARG00000020609 4537 1.69 0.847 0.843 - - - - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
33. SV2B SV2B 208 1.68 0.819 0.861 - - - - - - -
34. lbx1b ENSDARG00000018611 399 1.677 0.726 0.951 - - - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
35. atp2b3b ENSDARG00000023445 1424 1.675 0.795 0.880 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
36. entpd3 ENSDARG00000035309 263 1.672 0.846 0.826 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
37. NTRK3 NTRK3 163 1.667 0.881 0.786 - - - - - - -
38. ptprnb ENSDARG00000077047 2743 1.662 0.859 0.803 - - - - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
39. stmn2a ENSDARG00000033234 2272 1.649 0.837 0.812 - - - - - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
40. MCTP1 MCTP1 219 1.648 0.856 0.792 - - - - - - -
41. dtnbb ENSDARG00000013020 280 1.647 0.818 0.829 - - - - - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
42. gap43 ENSDARG00000099744 4114 1.646 0.867 0.779 - - - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
43. TUBB8P7_1 TUBB8P7_1 2722 1.639 0.792 0.847 - - - - - - -
44. syt2a ENSDARG00000025206 681 1.637 0.834 0.803 - - - - - - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
45. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.636 0.883 0.753 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
46. kif5aa ENSDARG00000098936 2428 1.635 0.880 0.755 - - - - - - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
47. npb ENSDARG00000078828 230 1.633 0.833 0.800 - - - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
48. nova2 ENSDARG00000017673 7685 1.633 0.785 0.848 - - - - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
49. tagln3a ENSDARG00000079805 123 1.627 0.841 0.786 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
50. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.623 - 0.786 - - - - - 0.837 - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
51. HMGXB4 HMGXB4 209 1.621 0.798 - - - - - - 0.823 -
52. sox2 ENSDARG00000070913 2763 1.619 0.792 0.827 - - - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
53. C18H15orf59 C18H15orf59 80 1.613 0.827 0.786 - - - - - - -
54. B4GALNT1 B4GALNT1 352 1.612 0.729 0.883 - - - - - - -
55. cdk5r1b ENSDARG00000045087 2075 1.61 0.799 - - - - - - 0.811 - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
56. gnb5b ENSDARG00000055377 98 1.608 - 0.827 - - - - - 0.781 - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
57. si:ch211-152f6.6 si:ch211-152f6.6 278 1.608 0.703 0.905 - - - - - - -
58. cdk5r2a ENSDARG00000071011 167 1.606 0.881 - - - - - - 0.725 - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
59. slc1a2b ENSDARG00000102453 3136 1.599 0.820 0.779 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
60. scn2b ENSDARG00000101713 796 1.596 0.735 0.861 - - - - - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
61. pcdh1gc5 ENSDARG00000104826 10052 1.592 0.874 0.718 - - - - - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
62. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.591 0.762 0.829 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
63. C12H10orf90 C12H10orf90 143 1.586 0.813 0.773 - - - - - - -
64. sox3 ENSDARG00000053569 12016 1.583 0.793 0.790 - - - - - - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
65. penka ENSDARG00000004869 161 1.582 0.808 0.774 - - - - - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
66. BX511257.1 BX511257.1 66 1.58 0.738 0.842 - - - - - - -
67. TRPC4_1 TRPC4_1 212 1.576 0.790 0.786 - - - - - - -
68. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.573 0.843 0.730 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
69. si:ch73-21g5.7 ENSDARG00000093156 9412 1.567 0.701 0.866 - - - - - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
70. nptx1l ENSDARG00000074671 569 1.563 0.708 0.855 - - - - - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
71. ARHGAP22 ENSDARG00000076434 1406 1.557 0.823 0.734 - - - - - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
72. rtn1b ENSDARG00000021143 1682 1.553 0.714 0.839 - - - - - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
73. slc2a15b ENSDARG00000053269 899 1.553 0.819 - - - - 0.734 - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
74. slc8a2b ENSDARG00000100592 598 1.552 0.817 0.735 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
75. dlb ENSDARG00000004232 5120 1.551 0.734 0.817 - - - - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
76. timm17b ENSDARG00000060124 125 1.549 0.768 0.781 - - - - - - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
77. hs3st3b1b ENSDARG00000086645, ENSDARG00000113233 1194 1.548 0.710 - - - - 0.838 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b [Source:ZFIN;Acc:ZDB-GENE-070202-5]
78. slc17a6b ENSDARG00000041150 823 1.547 - 0.786 - - - - - - 0.761 solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
79. zic1 ENSDARG00000015567 2520 1.541 0.819 0.722 - - - - - - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
80. hoxa3a ENSDARG00000103862 2239 1.536 0.791 0.745 - - - - - - - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
81. KCNAB2 KCNAB2 129 1.526 0.740 0.786 - - - - - - -
82. KCNG2 ENSDARG00000035961 58 1.525 0.739 0.786 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
83. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.523 0.806 0.717 - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
84. cadpsb ENSDARG00000070567 458 1.523 0.742 0.781 - - - - - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
85. syngr3a ENSDARG00000014871 405 1.521 0.747 0.774 - - - - - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
86. CT573433.2 CT573433.2 115 1.518 0.732 0.786 - - - - - - -
87. nes ENSDARG00000088805 2710 1.514 0.715 0.799 - - - - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
88. syt11b ENSDARG00000056105 578 1.513 0.756 0.757 - - - - - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
89. dld ENSDARG00000020219 4928 1.512 0.802 0.710 - - - - - - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
90. CU856539.1 ENSDARG00000010023 190 1.512 0.744 0.768 - - - - - - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
91. ZNF337_15 ZNF337_15 135 1.509 0.730 - - - - - - 0.779 -
92. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.508 0.717 0.791 - - - - - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
93. si:ch1073-127d16.1 ENSDARG00000087674 105 1.505 0.746 0.759 - - - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
94. vamp2 ENSDARG00000056877 2158 1.501 0.746 0.755 - - - - - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
95. SLC36A4 ENSDARG00000039661 175 1.499 0.717 0.782 - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
96. C12H10orf88 C12H10orf88 449 1.499 0.788 - - - - - - 0.711 -
97. zbtb20 ENSDARG00000005586 195 1.496 - 0.786 - - - - - - 0.710 zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
98. ppp2r4 1005 1.496 - 0.715 - - - 0.781 - - - protein phosphatase 2A activator, regulatory subunit 4
99. CABZ01117079.1 CABZ01117079.1 123 1.494 0.718 - - - - - - 0.776 -
100. syt9b ENSDARG00000029239 31 1.493 0.707 0.786 - - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]

There are 1411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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