Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PCDH20

Gene Name Gene ID Reads Annotation
PCDH20 ENSDARG00000036424, ENSDARG00000101910 90 protocadherin 20 [Source:NCBI gene;Acc:100007362]










Genes with expression patterns similar to PCDH20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PCDH20 ENSDARG00000036424, ENSDARG00000101910 90 4 - - 1.000 - 1.000 - - 1.000 1.000 protocadherin 20 [Source:NCBI gene;Acc:100007362]
2. mylkb ENSDARG00000004753 95 1 - - - - - - - - 1.000 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
3. def6b ENSDARG00000044524 99 1 - - - - - - - - 1.000 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
4. sox8 sox8 109 0.999 - - - - - - - - 0.999
5. HTR1E 103 0.999 - - - - - - - - 0.999 5-hydroxytryptamine receptor 1E
6. slc6a19b ENSDARG00000056719 140 0.999 - - - - - - - - 0.999 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
7. zgc:154006 ENSDARG00000061797 152 0.999 - - - - - - - - 0.999 zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
8. si:ch211-135f11.1 166 0.998 - - - - - - - - 0.998 si:ch211-135f11.1, transcript variant X3
9. slc25a23a ENSDARG00000005690 824 0.998 - - - - - - - - 0.998 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
10. nudt3b ENSDARG00000042123 311 0.998 - - - - - - - - 0.998 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
11. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.997 - - - - - - - - 0.997
12. THEM4 ENSDARG00000061621 364 0.997 - - - - - - - - 0.997 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
13. pfkfb2a ENSDARG00000023840 184 0.997 - - - - - - - - 0.997 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
14. coil ENSDARG00000040070 863 0.997 - - - - - - - - 0.997 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
15. LARS2 ENSDARG00000075337 181 0.997 - - - - - - - - 0.997 leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
16. ppp6r2b ENSDARG00000069654 323 0.997 - - - - - - - - 0.997 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
17. SLC35A2 ENSDARG00000058990 289 0.996 - - - - - - - - 0.996 solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
18. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 0.996 - - - - - - - - 0.996 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
19. pex7 ENSDARG00000042553 409 0.995 - - - - - - - - 0.995 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
20. panx1a ENSDARG00000025285 352 0.995 - - - - - - - - 0.995 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
21. ints10 ENSDARG00000043031 455 0.995 - - - - - - - - 0.995 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
22. smim8 ENSDARG00000071040 622 0.995 - - - - - - - - 0.995 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
23. msxa msxa 263 0.994 - - - - - - - - 0.994
24. slc12a9 ENSDARG00000060366 293 0.994 - - - - - - - - 0.994 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
25. LDLR LDLR 838 0.993 - - - - - - - - 0.993
26. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.993 - - - - - - - - 0.993 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
27. phactr4a ENSDARG00000015552 1315 0.993 - - - - - - - - 0.993 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
28. TLN2 TLN2 359 0.993 - - - - - - - - 0.993
29. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.993 - - - - - - - - 0.993 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
30. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.993 - - - - - - - - 0.993 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
31. HIP1R HIP1R 490 0.993 - - - - - - - - 0.993
32. zgc:136439 ENSDARG00000009267 720 0.991 - - - - - - - - 0.991 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
33. mir205 2147 0.991 - - - - - - - - 0.991 microRNA 205
34. PACS1_1 PACS1_1 1264 0.991 - - - - - - - - 0.991
35. tacc1 ENSDARG00000073753 1127 0.99 - - - - - - - - 0.990 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
36. ing2 ENSDARG00000104907 1336 0.99 - - - - - - - - 0.990 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
37. MON1B_1 MON1B_1 697 0.989 - - - - - - - - 0.989
38. ptpn2a ENSDARG00000016481 493 0.989 - - - - - - - - 0.989 protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
39. CABZ01101003.1 CABZ01101003.1 858 0.989 - - - - - - - - 0.989
40. ZNF337_22 ZNF337_22 322 0.989 - - - - - - - - 0.989
41. prkra ENSDARG00000076718 606 0.989 - - - - - - - - 0.989 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
42. NSMCE2 ENSDARG00000076379 2133 0.988 - - - - - - - - 0.988 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
43. zgc:113333 ENSDARG00000038242 797 0.988 - - - - - - - - 0.988 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
44. prc1a ENSDARG00000100918 1746 0.988 - - - - - - - - 0.988 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
45. mpv17 ENSDARG00000032431 1225 0.987 - - - - - - - - 0.987 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
46. m6pr ENSDARG00000018432 1411 0.987 - - - - - - - - 0.987 mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
47. csrp1a ENSDARG00000006603 5188 0.987 - - - - - - - - 0.987 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
48. mmp9 ENSDARG00000042816 298 0.987 - - - - - - - - 0.987 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
49. C19H18orf21 C19H18orf21 338 0.987 - - - - - - - - 0.987
50. narfl ENSDARG00000062216 768 0.987 - - - - - - - - 0.987 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
51. RNF5 ENSDARG00000075606 1730 0.987 - - - - - - - - 0.987 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
52. ZDHHC3 ZDHHC3 1208 0.986 - - - - - - - - 0.986
53. twistnb ENSDARG00000024416 1077 0.986 - - - - - - - - 0.986 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
54. sin3ab ENSDARG00000059812 2140 0.986 - - - - - - - - 0.986 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
55. CACUL1 ENSDARG00000021885 691 0.985 - - - - - - - - 0.985 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
56. CARD11 ENSDARG00000052741 249 0.984 - - - - - - - - 0.984 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
57. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.984 - - - - - - - - 0.984 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
58. marveld1 ENSDARG00000011724 1025 0.984 - - - - - - - - 0.984 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
59. atg4b ENSDARG00000052104 758 0.984 - - - - - - - - 0.984 autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
60. TSC22D1 ENSDARG00000038306 517 0.983 - - - - - - - - 0.983 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
61. ERAP1_1 ERAP1_1 64 0.983 - - 0.983 - - - - - -
62. C25H11orf24 C25H11orf24 1011 0.983 - - - - - - - - 0.983
63. PGBD4_3 PGBD4_3 861 0.982 - - - - - - - - 0.982
64. stmn4l ENSDARG00000043932 654 0.982 - - - - - - - - 0.982 stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
65. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 0.982 - - - - - - - - 0.982 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
66. bmp2k ENSDARG00000020009, ENSDARG00000115681 955 0.981 - - - - - - - - 0.981 BMP2 inducible kinase [Source:ZFIN;Acc:ZDB-GENE-041212-72]
67. MALSU1 MALSU1 1251 0.981 - - - - - - - - 0.981
68. fgf8a ENSDARG00000003399 580 0.981 - - - - - - - - 0.981 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
69. acads ENSDARG00000030781 1669 0.981 - - - - - - - - 0.981 acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64]
70. CR847925.1 CR847925.1 835 0.98 - - - - - - - - 0.980
71. dennd3a ENSDARG00000078797 542 0.98 - - - - - - - - 0.980 DENN/MADD domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-091230-6]
72. dhrs3b ENSDARG00000044803 2931 0.98 - - - - - - - - 0.980 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
73. sar1b ENSDARG00000103403 1699 0.979 - - - - - - - - 0.979 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
74. sh3yl1 ENSDARG00000074393 815 0.979 - - - - - - - - 0.979 SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
75. EVA1B EVA1B 22 0.978 - - 0.978 - - - - - -
76. fam65b 557 0.978 - - - - - - - - 0.978 family with sequence similarity 65, member B, transcript variant X4
77. zgc:158254 ENSDARG00000071233 265 0.978 - - - - - - - - 0.978 zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
78. U6 U6 931 0.977 - - - - - - - - 0.977
79. si:dkey-11e23.9 ENSDARG00000095586 114 0.977 - - 0.977 - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
80. CDKN2B CDKN2B 5 0.977 - - 0.977 - - - - - -
81. si:dkeyp-82a1.8 ENSDARG00000095539 6 0.977 - - 0.977 - - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
82. zgc:173624 ENSDARG00000096141 3 0.977 - - 0.977 - - - - - - zgc:173624 [Source:ZFIN;Acc:ZDB-GENE-071004-60]
83. lamc3 ENSDARG00000093572 562 0.977 - - - - - - - - 0.977 laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]
84. tmprss3a ENSDARG00000053315 5 0.977 - - 0.977 - - - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
85. SLC47A1 ENSDARG00000046012 3 0.977 - - 0.977 - - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
86. vti1a ENSDARG00000045065 7 0.977 - - 0.977 - - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
87. gna15.1 ENSDARG00000016364 754 0.976 - - - - - - - - 0.976 guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
88. TRIM35 TRIM35 100 0.976 - - 0.976 - - - - - -
89. ssh2b ENSDARG00000098955 614 0.975 - - - - - - - - 0.975 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
90. ngfrb_1 ENSDARG00000089223, ENSDARG00000115390 4 0.975 - - 0.975 - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
91. si:dkey-26g8.11 si:dkey-26g8.11 4 0.974 - - 0.974 - - - - - -
92. nol7 ENSDARG00000075795 1559 0.974 - - - - - - - - 0.974 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
93. il17rd ENSDARG00000098359 1153 0.974 - - - - - - - - 0.974 interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
94. lap3 ENSDARG00000061981 1188 0.974 - - - - - - - - 0.974 leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
95. PVRL4 1691 0.973 - - - - - - - - 0.973 poliovirus receptor-related 4
96. dlg5a ENSDARG00000074059 1834 0.973 - - - - - - - - 0.973 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
97. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.973 - - - - - - - - 0.973 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
98. FBXO33 ENSDARG00000075400 1164 0.973 - - - - - - - - 0.973 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
99. vcana ENSDARG00000103515 611 0.972 - - - - - - - - 0.972 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
100. acp1 ENSDARG00000076486 3275 0.971 - - - - - - - - 0.971 acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]

There are 371 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA