Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDH18

Gene Name Gene ID Reads Annotation
PCDH18 ENSGALG00000009732 6634 protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]











Genes with expression patterns similar to PCDH18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCDH18 ENSGALG00000009732 6634 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
2. SNX27 ENSGALG00000040687 3221 1.718 - - - - - - 0.993 0.725 - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
3. FURIN ENSGALG00000008341 2609 1.704 - - - - - - 0.993 - - 0.711 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
4. TMCC2 ENSGALG00000034281 3458 1.445 - - - - - - - 0.739 0.706 - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
5. GNL2 ENSGALG00000001973 10148 0.996 - - - - - - 0.996 - - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
6. MTFR1 ENSGALG00000038385 9419 0.995 - - - - - - 0.995 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
7. NOLC1 ENSGALG00000041124 12765 0.995 - - - - - - 0.995 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
8. RPN1 ENSGALG00000005907 25315 0.994 - - - - - - 0.994 - - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
9. E2F1 ENSGALG00000003045 5604 0.994 - - - - - - 0.994 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
10. ACAD11 ENSGALG00000035949 5483 0.994 - - - - - - 0.994 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
11. CMIP ENSGALG00000038494 5016 0.994 - - - - - - 0.994 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
12. NPEPL1 ENSGALG00000007533 5908 0.994 - - - - - - 0.994 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
13. NCBP1 ENSGALG00000002087 8907 0.994 - - - - - - 0.994 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
14. ING4 ENSGALG00000014457 5561 0.994 - - - - - - 0.994 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
15. ITPK1 ENSGALG00000034898 4212 0.993 - - - - - - 0.993 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
16. BLZF1 ENSGALG00000015225 3594 0.993 - - - - - - 0.993 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
17. KBTBD4 ENSGALG00000008089 1799 0.993 - - - - - - 0.993 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
18. MED18 ENSGALG00000028149 2684 0.993 - - - - - - 0.993 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
19. IDH2 ENSGALG00000034434 18307 0.993 - - - - - - 0.993 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
20. EIF6 ENSGALG00000033993 14647 0.993 - - - - - - 0.993 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
21. C9orf78 ENSGALG00000004152 7140 0.993 - - - - - - 0.993 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
22. SAT1 ENSGALG00000016348 8469 0.993 - - - - - - 0.993 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
23. TASP1 ENSGALG00000009057 1295 0.993 - - - - - - 0.993 - - - taspase 1 [Source:NCBI gene;Acc:416741]
24. GATC ENSGALG00000007195 8610 0.993 - - - - - - 0.993 - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
25. TET3 ENSGALG00000037860 3129 0.993 - - - - - - 0.993 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
26. ZNF326 ENSGALG00000006113 15141 0.993 - - - - - - 0.993 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
27. DNAJC8 ENSGALG00000000790 19405 0.993 - - - - - - 0.993 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
28. MAD2L1BP ENSGALG00000027871 7835 0.993 - - - - - - 0.993 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
29. PRDM15 ENSGALG00000019178 2729 0.992 - - - - - - 0.992 - - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
30. ENPP2 ENSGALG00000032746 6086 0.992 - - - - - - 0.992 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
31. ENSGALG00000029084 ENSGALG00000029084 890 0.992 - - - - - - 0.992 - - -
32. EIF2AK1 ENSGALG00000003391 3381 0.992 - - - - - - 0.992 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
33. AP3D1 ENSGALG00000000996 16143 0.992 - - - - - - 0.992 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
34. MRPL35 ENSGALG00000022950 26070 0.991 - - - - - - 0.991 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
35. PSMC1 ENSGALG00000010675 20633 0.99 - - - - - - 0.990 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
36. SLC25A4 ENSGALG00000010614 9970 0.989 - - - - - - 0.989 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
37. CD2AP ENSGALG00000016720 8852 0.989 - - - - - - 0.989 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
38. CSNK1D ENSGALG00000002719 19530 0.987 - - - - - - 0.987 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
39. C20H20ORF24 ENSGALG00000001054 22026 0.986 - - - - - - 0.986 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
40. OTUD6B ENSGALG00000041337 15657 0.986 - - - - - - 0.986 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
41. LRWD1 ENSGALG00000001852 13862 0.978 - - - - - - 0.978 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
42. XPO5 ENSGALG00000010341 24765 0.974 - - - - - - 0.974 - - - exportin 5 [Source:NCBI gene;Acc:421450]
43. PPA2 ENSGALG00000010582 22301 0.967 - - - - - - 0.967 - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
44. C13H5ORF15 C13H5ORF15 11559 0.961 - - - - - - 0.961 - - -
45. ATP5A1 ATP5A1 32367 0.958 - - - - - - 0.958 - - -
46. EMC2 ENSGALG00000040325 16227 0.921 - - - - - - 0.921 - - - ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
47. DYL1 ENSGALG00000007153 94287 0.92 - - - - - - 0.920 - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
48. RPL9 ENSGALG00000000150 81866 0.899 - - - - - - 0.899 - - - ribosomal protein L9 [Source:NCBI gene;Acc:425468]
49. SHFM1 SHFM1 51606 0.872 - - - - - - 0.872 - - -
50. MDH1 ENSGALG00000008858 44636 0.868 - - - - - - 0.868 - - - malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
51. RPS2 ENSGALG00000005490 293634 0.864 - - - - - - 0.864 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
52. TCF12 ENSGALG00000004304 63081 0.852 - - - - - - 0.852 - - - transcription factor 12 [Source:NCBI gene;Acc:396334]
53. GNB1 ENSGALG00000001334 52398 0.838 - - - - - - 0.838 - - - G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
54. PEX16 ENSGALG00000008421 3684 0.834 - - - - - - - - - 0.834 peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
55. EIF5B ENSGALG00000016764 30681 0.834 - - - - - - - 0.834 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
56. SLMO2 SLMO2 9207 0.833 - - - - - - - 0.833 - -
57. SF3B3 ENSGALG00000002531 19397 0.832 - - - - - - - 0.832 - - splicing factor 3b subunit 3, transcript variant X2
58. HSF2 ENSGALG00000038420 5259 0.817 - - - - - - - 0.817 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
59. BLMH ENSGALG00000004259 36907 0.816 - - - - - - - 0.816 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
60. FTH FTH 121430 0.815 - - - - - - 0.815 - - -
61. ANLN 10479 0.814 - - - - - - - 0.814 - - anillin actin binding protein, transcript variant X2
62. NANS ENSGALG00000015320 10552 0.812 - - - - - - - 0.812 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
63. C1GALT1 ENSGALG00000009752 7148 0.808 - - - - - - - 0.808 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
64. RRP1B ENSGALG00000035696 12309 0.807 - - - - - - - 0.807 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
65. HOXA5 ENSGALG00000025929 6231 0.807 - - - - - - - 0.807 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
66. HIGD1A ENSGALG00000030775 5724 0.806 - - - - - - - 0.806 - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
67. LIMCH1 ENSGALG00000014258 1987 0.805 - - - - - - - - - 0.805 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
68. IRF2 ENSGALG00000010642 923 0.805 - - - - - - - - - 0.805 interferon regulatory factor 2 [Source:NCBI gene;Acc:396115]
69. DAD1 ENSGALG00000035626 32604 0.801 - - - - - - - 0.801 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
70. NIP7 ENSGALG00000000650 23932 0.799 - - - - - - - 0.799 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
71. TBL3 ENSGALG00000005558 8363 0.798 - - - - - - - 0.798 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]
72. NUP85 ENSGALG00000007974 21249 0.797 - - - - - - - 0.797 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
73. PTGR1 ENSGALG00000015702 3667 0.792 - - - - - - - 0.792 - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
74. WDR3 ENSGALG00000014791 5856 0.789 - - - - - - - 0.789 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
75. COLEC10 ENSGALG00000033144 3436 0.788 - - - - - - - - - 0.788 collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
76. C2CD5 ENSGALG00000013210 3060 0.788 - - - - - - - - 0.788 - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
77. SEC24A ENSGALG00000006417 1805 0.787 - - - - - - - 0.787 - - Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. [Source:RefSeq mRNA;Acc:NM_001321593]
78. KIF26A ENSGALG00000011581 11285 0.786 - - - - - - - - 0.786 - kinesin family member 26A [Source:HGNC Symbol;Acc:HGNC:20226]
79. C10orf88 ENSGALG00000000011 6026 0.785 - - - - - - - 0.785 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
80. C11H16ORF80 C11H16ORF80 18673 0.785 - - - - - - - 0.785 - -
81. NDUFA12 ENSGALG00000011325 19807 0.782 - - - - - - - 0.782 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
82. HINT3 ENSGALG00000044342 5674 0.781 - - - - - - - 0.781 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
83. NSUN2 ENSGALG00000013064 2005 0.78 - - - - - - - - 0.780 - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
84. GRAMD3 1685 0.78 - - - - - - - - - 0.780 GRAM domain containing 3, transcript variant X9
85. DNAJB11 ENSGALG00000006564 9353 0.78 - - - - - - - 0.780 - - DnaJ heat shock protein family (Hsp40) member B11
86. GLMN ENSGALG00000005959 2049 0.779 - - - - - - - - 0.779 - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
87. SDF2L1 ENSGALG00000031982 6084 0.779 - - - - - - - 0.779 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
88. VTA1 ENSGALG00000013810 4998 0.776 - - - - - - - 0.776 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
89. PSMB3 ENSGALG00000001597 22588 0.776 - - - - - - - 0.776 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
90. KLHL15 ENSGALG00000016345 1638 0.775 - - - - - - - 0.775 - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
91. ANAPC16 ENSGALG00000004410 18001 0.775 - - - - - - - 0.775 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
92. SSR1 ENSGALG00000012798 62626 0.775 - - - - - - - 0.775 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
93. CHRAC1 ENSGALG00000040823 5695 0.775 - - - - - - - 0.775 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
94. RAB18 ENSGALG00000007435 3589 0.775 - - - - - - - 0.775 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
95. NKIRAS1 ENSGALG00000011289 311 0.774 - - - - - - - - 0.774 - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
96. USE1 ENSGALG00000003703 4680 0.774 - - - - - - - 0.774 - - unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
97. ECD ENSGALG00000002686 2872 0.774 - - - - - - - 0.774 - - ecdysoneless cell cycle regulator [Source:NCBI gene;Acc:423638]
98. ANAPC5 ENSGALG00000004179 4087 0.773 - - - - - - - 0.773 - - anaphase promoting complex subunit 5 [Source:NCBI gene;Acc:416842]
99. ACP6 ENSGALG00000015485 3147 0.773 - - - - - - - 0.773 - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
100. SP4 ENSGALG00000039454 5597 0.773 - - - - - - - 0.773 - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]

There are 237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA