Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDH17

Gene Name Gene ID Reads Annotation
PCDH17 ENSGALG00000016941 1006 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]











Genes with expression patterns similar to PCDH17

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCDH17 ENSGALG00000016941 1006 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
2. C9H2ORF82 ENSGALG00000040264 4201 3.36 - - - - - 0.891 0.793 0.882 - 0.794 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
3. COL8A1 ENSGALG00000015253 2505 3.335 - - - - - 0.955 0.718 0.856 - 0.806 collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
4. SPON2 ENSGALG00000038433 1240 3.21 - - - - - 0.928 0.723 0.816 - 0.743 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
5. OCA2 ENSGALG00000016740 421 2.537 - - - - - 0.956 - 0.854 - 0.727 OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
6. SCARA3 ENSGALG00000026651 2559 2.512 - - - - - 0.874 0.815 0.823 - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
7. ACAN ENSGALG00000006725 184 2.505 - - - - - 0.894 - 0.881 - 0.730 aggrecan [Source:NCBI gene;Acc:395798]
8. OSF-2 OSF-2 10433 2.312 - - - - - 0.707 0.730 0.875 - -
9. RAB38 ENSGALG00000028018 1046 1.82 - - - - - 0.902 - 0.918 - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
10. SAMD3 ENSGALG00000032409 459 1.811 - - - - - 0.920 - 0.891 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
11. COL9A2 ENSGALG00000027526 4685 1.761 - - - - - 0.877 - 0.884 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
12. TIMP3 ENSGALG00000028627 8706 1.755 - - - - - 0.889 - 0.866 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
13. TAC1 ENSGALG00000009737 2211 1.746 - - - - - 0.913 - 0.833 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
14. COL9A3 ENSGALG00000005628 2842 1.741 - - - - - 0.869 - 0.872 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
15. LRRTM1 ENSGALG00000015967 85 1.681 - - - - - 0.849 0.832 - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
16. LRRC71 ENSGALG00000027351 695 1.68 - - 0.969 - - - - - 0.711 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
17. ZNF385D ENSGALG00000011283 2578 1.634 - - 0.917 - - 0.717 - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
18. SST ENSGALG00000007361 1383 1.628 - - - - - 0.826 - 0.802 - - somatostatin [Source:NCBI gene;Acc:396279]
19. EMILIN3 ENSGALG00000030012 6200 1.618 - - - - - 0.884 0.734 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
20. WIF1 ENSGALG00000039209 863 1.617 - - - - - 0.902 - 0.715 - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
21. LECT1 LECT1 12694 1.616 - - - - - - 0.780 0.836 - -
22. FNDC1 ENSGALG00000011663 1040 1.598 - - - - - - - 0.867 - 0.731 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
23. SCARA5 ENSGALG00000016580 712 1.594 - - - - - 0.892 0.702 - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
24. SMPD3 ENSGALG00000034950 4335 1.585 - - 0.812 - - - - 0.773 - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
25. ZNF385B ENSGALG00000009012 290 1.585 - - - - - 0.881 - 0.704 - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
26. ZNF536 ENSGALG00000035602 1127 1.579 - - - 0.816 - - 0.763 - - - zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]
27. WWP2 ENSGALG00000000699 5040 1.564 - - - - - 0.816 0.748 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
28. SLC24A4 ENSGALG00000010793 238 1.563 - - - - - - 0.759 0.804 - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
29. TPM4 ENSGALG00000002563 15621 1.552 - - 0.843 - - - - - 0.709 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
30. PTGDS ENSGALG00000030886 363 1.434 - - - - - 0.731 - 0.703 - - prostaglandin D2 synthase 21kDa (brain) [Source:NCBI gene;Acc:374110]
31. BBX ENSGALG00000015353 1281 0.984 - - 0.984 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
32. CLEC16A ENSGALG00000007167 66 0.983 - - 0.983 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
33. GGT7 ENSGALG00000001062 476 0.983 - - 0.983 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
34. TRIM13 ENSGALG00000017011 92 0.982 - - 0.982 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
35. NXPE3 ENSGALG00000015344 111 0.981 - - 0.981 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
36. L3MBTL3 ENSGALG00000034030 113 0.981 - - 0.981 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
37. SZT2 ENSGALG00000028561 255 0.98 - - 0.980 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
38. SMARCAD1 ENSGALG00000037339 149 0.98 - - 0.980 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
39. RQCD1 RQCD1 110 0.979 - - 0.979 - - - - - - -
40. TDRD6 48 0.979 - - 0.979 - - - - - - - tudor domain containing 6
41. UEVLD ENSGALG00000006342 164 0.979 - - 0.979 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
42. MRC2 ENSGALG00000000461 48 0.979 - - 0.979 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
43. ITGB4 ENSGALG00000002389 44 0.979 - - 0.979 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
44. GTF2H2 ENSGALG00000002399 2361 0.979 - - 0.979 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
45. ITM2B ENSGALG00000016996 1112 0.979 - - 0.979 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
46. MED12 ENSGALG00000036322 814 0.979 - - 0.979 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
47. ENSGALG00000028964 ENSGALG00000028964 46 0.979 - - 0.979 - - - - - - -
48. ENSGALG00000020103 ENSGALG00000020103 64 0.979 - - 0.979 - - - - - - -
49. ATF7IP ENSGALG00000011814 1571 0.978 - - 0.978 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
50. CDC14B ENSGALG00000012627 110 0.978 - - 0.978 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
51. PTDSS2 ENSGALG00000004300 682 0.978 - - 0.978 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
52. U4 U4 69 0.978 - - 0.978 - - - - - - -
53. RAD54L2 ENSGALG00000003243 187 0.978 - - 0.978 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
54. ENSGALG00000002020 ENSGALG00000002020 183 0.977 - - 0.977 - - - - - - -
55. AKAP10 ENSGALG00000004679 103 0.977 - - 0.977 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
56. DBN1 ENSGALG00000033405 216 0.977 - - 0.977 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
57. ENSGALG00000004703 ENSGALG00000004703 112 0.977 - - 0.977 - - - - - - -
58. OSGIN2 ENSGALG00000042840 83 0.977 - - 0.977 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
59. CHAMP1 ENSGALG00000016813 508 0.976 - - 0.976 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
60. ABCC3 ENSGALG00000007522 340 0.976 - - 0.976 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
61. FBXL5 ENSGALG00000014510 245 0.976 - - 0.976 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
62. SLC3A1 ENSGALG00000009973 608 0.976 - - 0.976 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
63. TUBGCP3 ENSGALG00000016836 332 0.975 - - 0.975 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
64. F2R ENSGALG00000014983 106 0.975 - - 0.975 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
65. TCTN2 ENSGALG00000023683 3596 0.975 - - 0.975 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
66. BBS5 ENSGALG00000009846 344 0.975 - - 0.975 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
67. PCYT1B 190 0.973 - - 0.973 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
68. MLLT3 ENSGALG00000015078 502 0.973 - - 0.973 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
69. LRRC42 ENSGALG00000010743 384 0.972 - - 0.972 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
70. SMOC2 ENSGALG00000011205 340 0.972 - - 0.972 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
71. WDR92 ENSGALG00000008760 3934 0.972 - - 0.972 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
72. FAM134C 860 0.972 - - 0.972 - - - - - - - family with sequence similarity 134 member C
73. ABCE1 ENSGALG00000009961 958 0.972 - - 0.972 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
74. RPS6KB1 ENSGALG00000005198 169 0.971 - - 0.971 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
75. TTPAL ENSGALG00000004244 2734 0.97 - - 0.970 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
76. GFER ENSGALG00000005579 1367 0.969 - - 0.969 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
77. GDPD4 ENSGALG00000000690 824 0.969 - - 0.969 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
78. PRUNE PRUNE 452 0.968 - - 0.968 - - - - - - -
79. TMEM242 ENSGALG00000013689 377 0.968 - - 0.968 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
80. NGF ENSGALG00000002556 122 0.968 - - 0.968 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
81. KCTD3 ENSGALG00000009678 335 0.967 - - 0.967 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
82. ATP8B4 ENSGALG00000002326 456 0.967 - - 0.967 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
83. WHSC1 1712 0.966 - - 0.966 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
84. ADK ENSGALG00000005057 199 0.965 - - 0.965 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
85. AASDHPPT ENSGALG00000027981 1017 0.963 - - 0.963 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
86. RECQL ENSGALG00000013174 1323 0.962 - - 0.962 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
87. ENSGALG00000008689 ENSGALG00000008689 232 0.962 - - 0.962 - - - - - - -
88. SLK ENSGALG00000008318 2220 0.96 - - 0.960 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
89. NACAD 679 0.959 - - 0.959 - - - - - - - NAC alpha domain containing, transcript variant X1
90. SGCE ENSGALG00000009670 3070 0.959 - - 0.959 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
91. TFAP2C ENSGALG00000007690 768 0.958 - - 0.958 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
92. CHGA ENSGALG00000010820 1028 0.957 - - 0.957 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
93. SOBP ENSGALG00000043047 147 0.957 - - 0.957 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
94. IFT81 ENSGALG00000003854 2534 0.957 - - 0.957 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
95. APTX ENSGALG00000001954 692 0.956 - - 0.956 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
96. DDX6 ENSGALG00000033064 2193 0.955 - - 0.955 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
97. RRN3 ENSGALG00000041989 3934 0.955 - - 0.955 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
98. SLC37A3 ENSGALG00000012849 836 0.955 - - 0.955 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
99. CA9 ENSGALG00000021340 1431 0.955 - - 0.955 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
100. RFK ENSGALG00000033558 1364 0.954 - - 0.954 - - - - - - - riboflavin kinase, transcript variant X3

There are 569 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA