Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PCDH12

Gene Name Gene ID Reads Annotation
PCDH12 ENSDARG00000076594 381 protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]










Genes with expression patterns similar to PCDH12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PCDH12 ENSDARG00000076594 381 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
2. nit1 ENSDARG00000070116, ENSDARG00000113610 93 2.282 0.732 - - - - 0.827 0.723 - - nitrilase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-65]
3. prcp ENSDARG00000037883 473 1.69 0.860 0.830 - - - - - - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
4. vsg1 1870 1.678 0.909 0.769 - - - - - - - vessel-specific 1
5. adra1d ENSDARG00000024101 387 1.651 0.950 - - - - - 0.701 - - adrenoceptor alpha 1D [Source:ZFIN;Acc:ZDB-GENE-090312-203]
6. si:ch73-290k24.5 ENSDARG00000076310 39 1.649 0.848 - - - - 0.801 - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
7. cdc37l1 ENSDARG00000044265 360 1.647 0.786 - - - - - 0.861 - - cell division cycle 37-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8865]
8. NXPH4 11 1.634 0.848 - - - - 0.786 - - - neurexophilin 4
9. FGD5 FGD5 250 1.632 0.885 0.747 - - - - - - -
10. taf1 ENSDARG00000035330 912 1.625 - 0.843 - - - - 0.782 - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
11. OVOL1 75 1.61 - 0.824 - - - 0.786 - - - ovo-like zinc finger 1, transcript variant X1
12. btk ENSDARG00000004433 106 1.591 0.848 0.743 - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
13. clec14a ENSDARG00000103533 718 1.585 0.877 0.708 - - - - - - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
14. slc13a2 ENSDARG00000053853 1164 1.585 0.883 - - - - 0.702 - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
15. skap2 ENSDARG00000000906 146 1.562 - 0.787 - - - 0.775 - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
16. usp40 ENSDARG00000071197 825 1.555 - 0.808 - - - 0.747 - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
17. zc3h7b 2936 1.535 - 0.803 - - - 0.732 - - - zinc finger CCCH-type containing 7B
18. WDR89 ENSDARG00000077265 322 1.53 0.715 - - - - - 0.815 - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
19. lace1b lace1b 126 1.52 - 0.803 - - - 0.717 - - -
20. rtkn2 rtkn2 1092 1.494 - 0.729 - - - - 0.765 - -
21. CABZ01064973.1 CABZ01064973.1 160 1.493 0.783 - - - - - - 0.710 -
22. snai1b ENSDARG00000046019 886 1.492 0.765 0.727 - - - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
23. zgc:66433 ENSDARG00000071697 688 1.491 0.705 0.786 - - - - - - - zgc:66433 [Source:ZFIN;Acc:ZDB-GENE-030131-9832]
24. iba57 ENSDARG00000063446 324 1.487 - 0.775 - - - 0.712 - - - IBA57, iron-sulfur cluster assembly [Source:ZFIN;Acc:ZDB-GENE-060929-712]
25. ddx43 ENSDARG00000022614 48 1.481 - - - - - 0.743 0.738 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
26. VPRBP VPRBP 727 1.48 0.705 0.775 - - - - - - -
27. pmpcb ENSDARG00000016979 509 1.461 - 0.708 - - - - 0.753 - - peptidase (mitochondrial processing) beta [Source:ZFIN;Acc:ZDB-GENE-050220-10]
28. scarf1 ENSDARG00000077285 108 1.454 0.713 0.741 - - - - - - - scavenger receptor class F, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8778]
29. hhipl1 ENSDARG00000062501 210 1.433 - 0.722 - - - - 0.711 - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
30. gpr182 ENSDARG00000036616 455 0.95 0.950 - - - - - - - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
31. si:dkey-222o15.5 si:dkey-222o15.5 27 0.943 0.943 - - - - - - - -
32. si:ch1073-185p12.2 ENSDARG00000100199 7 0.943 0.943 - - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
33. mfng ENSDARG00000042925 104 0.943 0.943 - - - - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
34. cdh5 ENSDARG00000075549 2288 0.937 0.937 - - - - - - - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
35. guf1 ENSDARG00000029088 231 0.932 0.932 - - - - - - - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
36. mrc1a ENSDARG00000102100 1260 0.918 0.918 - - - - - - - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
37. tgfb1b ENSDARG00000034895 608 0.917 0.917 - - - - - - - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
38. lmo2 ENSDARG00000095019 1098 0.914 0.914 - - - - - - - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
39. pus7 ENSDARG00000031774 195 0.913 0.913 - - - - - - - - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
40. nbeal2 ENSDARG00000098641 1243 0.911 - 0.911 - - - - - - - neurobeachin-like 2 [Source:ZFIN;Acc:ZDB-GENE-100922-283]
41. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 0.909 0.909 - - - - - - - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
42. tie1 ENSDARG00000004105 400 0.907 0.907 - - - - - - - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
43. ddx46 ENSDARG00000099458 24 0.906 0.906 - - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
44. eng2b eng2b 865 0.906 0.906 - - - - - - - -
45. aqp7 ENSDARG00000026787 37 0.906 0.906 - - - - - - - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
46. ugt5e1 ENSDARG00000058048 25 0.906 0.906 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
47. ZNF408 ENSDARG00000036043 232 0.906 0.906 - - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
48. npnt ENSDARG00000018721 19 0.906 0.906 - - - - - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
49. hcrtr2 ENSDARG00000023722 70 0.906 0.906 - - - - - - - - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
50. fbxo15 ENSDARG00000016897 18 0.906 0.906 - - - - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
51. zgc:112263 zgc:112263 473 0.903 - - - - - 0.903 - - -
52. itpka ENSDARG00000042856, ENSDARG00000115453 391 0.899 - - - - - 0.899 - - - inositol-trisphosphate 3-kinase A [Source:ZFIN;Acc:ZDB-GENE-030616-116]
53. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.897 0.897 - - - - - - - - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
54. zbed4 ENSDARG00000024306, ENSDARG00000110788 513 0.895 - 0.895 - - - - - - - zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]
55. adamts8a ENSDARG00000007709 75 0.894 0.894 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
56. LARP4 LARP4 48 0.893 0.893 - - - - - - - -
57. mir451a 131 0.893 0.893 - - - - - - - - microRNA 451a
58. wdr90 ENSDARG00000079241 1163 0.893 0.893 - - - - - - - - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
59. smyd4 ENSDARG00000060983 106 0.893 0.893 - - - - - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
60. zgc:162576 zgc:162576 56 0.893 0.893 - - - - - - - -
61. slc6a4a ENSDARG00000061165 206 0.893 0.893 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
62. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.89 - - - - - 0.890 - - - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
63. trmt61a ENSDARG00000008480 464 0.886 - - - - - - 0.886 - - tRNA methyltransferase 61A [Source:ZFIN;Acc:ZDB-GENE-040718-5]
64. RHOBTB3 RHOBTB3 319 0.885 0.885 - - - - - - - -
65. HID1 HID1 282 0.885 - 0.885 - - - - - - -
66. USP31 ENSDARG00000074017 628 0.884 - 0.884 - - - - - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
67. aplnrb ENSDARG00000036670 546 0.883 0.883 - - - - - - - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
68. RAB35 RAB35 4 0.883 0.883 - - - - - - - -
69. SLC2A4RG SLC2A4RG 47 0.883 0.883 - - - - - - - -
70. zgc:162235 zgc:162235 9 0.883 0.883 - - - - - - - -
71. FAT4 ENSDARG00000105285 11 0.883 0.883 - - - - - - - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
72. CABZ01084613.1 CABZ01084613.1 22 0.883 0.883 - - - - - - - -
73. ctssa ctssa 24 0.883 0.883 - - - - - - - -
74. si:ch211-162i8.6 si:ch211-162i8.6 15 0.883 0.883 - - - - - - - -
75. si:ch73-338a16.3 ENSDARG00000101159 18 0.883 0.883 - - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
76. zgc:174708 zgc:174708 11 0.883 0.883 - - - - - - - -
77. hdhd3 ENSDARG00000053934 190 0.882 - 0.882 - - - - - - - haloacid dehalogenase-like hydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040724-118]
78. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 0.879 - 0.879 - - - - - - - Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
79. znf574 ENSDARG00000087074 885 0.879 - 0.879 - - - - - - - zinc finger protein 574 [Source:ZFIN;Acc:ZDB-GENE-100922-259]
80. fam46a fam46a 92 0.879 0.879 - - - - - - - -
81. aak1 aak1 81 0.878 0.878 - - - - - - - -
82. lrrc31 ENSDARG00000057392 61 0.877 - - - - - 0.877 - - - leucine rich repeat containing 31 [Source:ZFIN;Acc:ZDB-GENE-091204-286]
83. si:busm1-118j2.5 si:busm1-118j2.5 10462 0.877 0.877 - - - - - - - -
84. cyp26b1 ENSDARG00000077121 1364 0.877 0.877 - - - - - - - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
85. GABRG3 84 0.876 - - - - - 0.876 - - - gamma-aminobutyric acid type A receptor gamma3 subunit
86. ispd ENSDARG00000005034 173 0.874 - - - - - 0.874 - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
87. tek ENSDARG00000028663 167 0.873 0.873 - - - - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
88. impad1 ENSDARG00000058114 667 0.873 - - - - - 0.873 - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
89. nsun3 ENSDARG00000013023 136 0.87 0.870 - - - - - - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
90. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 0.87 - 0.870 - - - - - - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
91. zgc:113426 ENSDARG00000051793 37 0.869 0.869 - - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
92. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 0.869 - 0.869 - - - - - - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
93. TESK1 TESK1 109 0.869 0.869 - - - - - - - -
94. rfesd ENSDARG00000058725 339 0.867 0.867 - - - - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
95. CU915814.1 CU915814.1 245 0.866 0.866 - - - - - - - -
96. CABZ01071757.1 CABZ01071757.1 108 0.864 - - - - - 0.864 - - -
97. shank3b ENSDARG00000063054 148 0.864 0.864 - - - - - - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
98. C13H20orf194 C13H20orf194 580 0.862 - 0.862 - - - - - - -
99. fli1a ENSDARG00000054632 330 0.862 0.862 - - - - - - - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
100. rfk ENSDARG00000060522 546 0.862 - - - - - - 0.862 - - riboflavin kinase [Source:ZFIN;Acc:ZDB-GENE-081104-321]

There are 957 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA